RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 KNL1Q8NG31 2342 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 KCNK3O14649 394 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 PAPSS1O43252 624 aaPredicted RBP8.9□□□□□ -0.98
CAPN3-213ENST00000565173 SIN3BO75182 1162 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 DNTTP04053 509 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 IGHV4-34P06331 123 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 HOXB3P14651 431 aaPredicted RBP8.9□□□□□ -0.98
CAPN3-213ENST00000565173 CD27P26842 260 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 CSKP41240 450 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 GRIA4P48058 902 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 MARSP56192 900 aaKnown RBP8.9□□□□□ -0.98
CAPN3-213ENST00000565173 SCAPQ12770 1279 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 KCNH2Q12809 1159 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 NNTQ13423 1086 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 STIM1Q13586 685 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 MORC3Q14149 939 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 HNRNPA1L2Q32P51 320 aaKnown RBP8.9□□□□□ -0.98
CAPN3-213ENST00000565173 CCDC40Q4G0X9 1142 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 C9orf64Q5T6V5 341 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 DENND1BQ6P3S1 775 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 LAYNQ6UX15 382 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 MMS22LQ6ZRQ5 1243 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 BEND5Q7L4P6 421 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 PROSER1Q86XN7 944 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 MFN1Q8IWA4 741 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 CFAP52Q8N1V2 620 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 KDM1BQ8NB78 822 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 ADAM32Q8TC27 787 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 SETD7Q8WTS6 366 aaKnown RBP8.9□□□□□ -0.98
CAPN3-213ENST00000565173 STK32AQ8WU08 396 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 NELFBQ8WX92 580 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 SNX19Q92543 992 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 FAM129BQ96TA1 746 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 SLC4A5Q9BY07 1137 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 EBF2Q9HAK2 575 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 SGK2Q9HBY8 427 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 XPO7Q9UIA9 1087 aaKnown RBP8.9□□□□□ -0.98
CAPN3-213ENST00000565173 HOOK1Q9UJC3 728 aaKnown RBP8.9□□□□□ -0.98
CAPN3-213ENST00000565173 BTBD3Q9Y2F9 522 aa8.9□□□□□ -0.98
CAPN3-213ENST00000565173 BPTFQ12830 3046 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 TTC34A8MYJ7 566 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 FLRT2O43155 660 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 FSBPO95073 299 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 IGLV3-25P01717 112 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 ATXN1LP0C7T5 689 aaKnown RBP8.89□□□□□ -0.99
CAPN3-213ENST00000565173 PPP1R2P41236 205 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 CTSOP43234 321 aaPredicted RBP8.89□□□□□ -0.99
CAPN3-213ENST00000565173 CTSKP43235 329 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 GALCP54803 685 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 NUCB2P80303 420 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 CETN1Q12798 172 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 KCNJ12Q14500 433 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 DCAF6Q58WW2 860 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 ZC3H12AQ5D1E8 599 aaKnown RBP8.89□□□□□ -0.99
CAPN3-213ENST00000565173 PITRM1Q5JRX3 1037 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 ZNF776Q68DI1 518 aaPredicted RBP8.89□□□□□ -0.99
CAPN3-213ENST00000565173 KLHL10Q6JEL2 608 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 LRSAM1Q6UWE0 723 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 USP30Q70CQ3 517 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 TMPRSS7Q7RTY8 843 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 TMEM110Q86TL2 294 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 TAC4Q86UU9 113 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 DHX40Q8IX18 779 aaKnown RBP8.89□□□□□ -0.99
CAPN3-213ENST00000565173 CARNMT1Q8N4J0 409 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 ZNF557Q8N988 423 aaPredicted RBP8.89□□□□□ -0.99
CAPN3-213ENST00000565173 HJURPQ8NCD3 748 aaPredicted RBP8.89□□□□□ -0.99
CAPN3-213ENST00000565173 RHBDD1Q8TEB9 315 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 GOLGA1Q92805 767 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 PTPRN2Q92932 1015 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 SERPINB11Q96P15 392 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 CDC6Q99741 560 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 INTS2Q9H0H0 1204 aaKnown RBP8.89□□□□□ -0.99
CAPN3-213ENST00000565173 PABPC3Q9H361 631 aaKnown RBP8.89□□□□□ -0.99
CAPN3-213ENST00000565173 ACP6Q9NPH0 428 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 ST7Q9NRC1 585 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 SLCO3A1Q9UIG8 710 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 ERVW-1Q9UQF0 538 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 APOBEC2Q9Y235 224 aaKnown RBP8.89□□□□□ -0.99
CAPN3-213ENST00000565173 PTPRBP23467 1997 aa8.89□□□□□ -0.99
CAPN3-213ENST00000565173 ITIH6Q6UXX5 1313 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 TMEM131Q92545 1883 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 A0A1W2PPC4 97 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 TARSL2A2RTX5 802 aaKnown RBP8.88□□□□□ -0.99
CAPN3-213ENST00000565173 E5RJQ4 531 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 H0Y8X5 98 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 WNT9AO14904 365 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 MID1O15344 667 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 SART1O43290 800 aaKnown RBP8.88□□□□□ -0.99
CAPN3-213ENST00000565173 PCDHGA12O60330 932 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 LUC7L3O95232 432 aaKnown RBP8.88□□□□□ -0.99
CAPN3-213ENST00000565173 GNA14O95837 355 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 AFPP02771 609 aaKnown RBP8.88□□□□□ -0.99
CAPN3-213ENST00000565173 ASLP04424 464 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 WNT1P04628 370 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 SRPRAP08240 638 aaKnown RBP8.88□□□□□ -0.99
CAPN3-213ENST00000565173 ACADSBP45954 432 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 STX17P56962 302 aa8.88□□□□□ -0.99
CAPN3-213ENST00000565173 YWHAZP63104 245 aaKnown RBP8.88□□□□□ -0.99
CAPN3-213ENST00000565173 RACK1P63244 317 aaKnown RBP8.88□□□□□ -0.99
CAPN3-213ENST00000565173 PITX1P78337 314 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms