RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 GRHL1Q9NZI5 618 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 OGFRQ9NZT2 677 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 CWC15Q9P013 229 aaKnown RBP10.02□□□□□ -0.81
UBFD1-202ENST00000563366 UXTQ9UBK9 157 aaPredicted RBP10.02□□□□□ -0.81
UBFD1-202ENST00000563366 SLC12A6Q9UHW9 1150 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 SHOC2Q9UQ13 582 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 LZTS1Q9Y250 596 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 SNX24Q9Y343 169 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 SLC4A7Q9Y6M7 1214 aa10.02□□□□□ -0.81
UBFD1-202ENST00000563366 A0A1W2PQH9 124 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 BCLAF3A2AJT9 711 aaKnown RBP10.01□□□□□ -0.81
UBFD1-202ENST00000563366 GOLGA6BA6NDN3 693 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 SLC38A8A6NNN8 435 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 H7C0C1 242 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 C2CD2LO14523 706 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 FGF10O15520 208 aaPredicted RBP10.01□□□□□ -0.81
UBFD1-202ENST00000563366 MTSS1O43312 755 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 CREB3O43889 395 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 FGF18O76093 207 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 IFNB1P01574 187 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 GOT1P17174 413 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 MX2P20592 715 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 ECHS1P30084 290 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 GPC1P35052 558 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 ATP5OP48047 213 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 ATXN1P54253 815 aaKnown RBP10.01□□□□□ -0.81
UBFD1-202ENST00000563366 PITX1P78337 314 aaPredicted RBP10.01□□□□□ -0.81
UBFD1-202ENST00000563366 NRG1Q02297 640 aaPredicted RBP10.01□□□□□ -0.81
UBFD1-202ENST00000563366 RING1Q06587 406 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 SEMA3BQ13214 749 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 EIF4EBP2Q13542 120 aaPredicted RBP10.01□□□□□ -0.81
UBFD1-202ENST00000563366 MORF4L2Q15014 288 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 PAFAH1B3Q15102 231 aaKnown RBP10.01□□□□□ -0.81
UBFD1-202ENST00000563366 PDK1Q15118 436 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 TAF12Q16514 161 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 P3H1Q32P28 736 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 RAB6CQ53S08 254 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 SLC45A4Q5BKX6 768 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 TMEM240Q5SV17 173 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 DARS2Q6PI48 645 aaKnown RBP10.01□□□□□ -0.81
UBFD1-202ENST00000563366 RSPO2Q6UXX9 243 aaPredicted RBP10.01□□□□□ -0.81
UBFD1-202ENST00000563366 TAS1R1Q7RTX1 841 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 TMC3Q7Z5M5 1100 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 CROCCP2Q86T23 111 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 ITIH5Q86UX2 942 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 HOOK3Q86VS8 718 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 DDX42Q86XP3 938 aaKnown RBP eCLIP10.01□□□□□ -0.81
UBFD1-202ENST00000563366 HERC6Q8IVU3 1022 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 C7orf61Q8IZ16 206 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 KRT222Q8N1A0 295 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 VPS52Q8N1B4 723 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 LZTR1Q8N653 840 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 PQLC3Q8N755 202 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 FBXO25Q8TCJ0 367 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 COL26A1Q96A83 441 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 RTP4Q96DX8 246 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 CLSTN3Q9BQT9 956 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 TMEM121Q9BTD3 319 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 VN1R3Q9BXE9 311 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 FRMD8Q9BZ67 464 aaPredicted RBP10.01□□□□□ -0.81
UBFD1-202ENST00000563366 RAB6CQ9H0N0 254 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 POLMQ9NP87 494 aaPredicted RBP10.01□□□□□ -0.81
UBFD1-202ENST00000563366 ARHGEF4Q9NR80 690 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.01□□□□□ -0.81
UBFD1-202ENST00000563366 CALCOCO1Q9P1Z2 691 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 PAK5Q9P286 719 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 OR12D3Q9UGF7 316 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 ANAPC5Q9UJX4 755 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 HPCAL4Q9UM19 191 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 NEU2Q9Y3R4 380 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 HEY1Q9Y5J3 304 aa10.01□□□□□ -0.81
UBFD1-202ENST00000563366 DNALI1O14645 258 aaPredicted RBP10□□□□□ -0.81
UBFD1-202ENST00000563366 PRRG1O14668 218 aa10□□□□□ -0.81
UBFD1-202ENST00000563366 SPINT1O43278 529 aa10□□□□□ -0.81
UBFD1-202ENST00000563366 OPA1O60313 960 aa10□□□□□ -0.81
UBFD1-202ENST00000563366 PPFIA2O75334 1257 aa10□□□□□ -0.81
UBFD1-202ENST00000563366 AVPP01185 164 aa10□□□□□ -0.81
UBFD1-202ENST00000563366 ZDHHC11BP0C7U3 371 aa10□□□□□ -0.81
UBFD1-202ENST00000563366 CTSAP10619 480 aa10□□□□□ -0.81
UBFD1-202ENST00000563366 BMP2P12643 396 aa10□□□□□ -0.81
UBFD1-202ENST00000563366 RARGP13631 454 aa10□□□□□ -0.81
UBFD1-202ENST00000563366 PECAM1P16284 738 aaPredicted RBP10□□□□□ -0.81
UBFD1-202ENST00000563366 ATP2A2P16615 1042 aaKnown RBP10□□□□□ -0.81
UBFD1-202ENST00000563366 ATF6P18850 670 aa10□□□□□ -0.81
UBFD1-202ENST00000563366 TUBP50607 506 aa10□□□□□ -0.81
UBFD1-202ENST00000563366 CDR1P51861 262 aa10□□□□□ -0.81
UBFD1-202ENST00000563366 RABGGTBP53611 331 aa10□□□□□ -0.81
UBFD1-202ENST00000563366 EPHB3P54753 998 aa10□□□□□ -0.81
UBFD1-202ENST00000563366 EIF3BP55884 814 aaKnown RBP10□□□□□ -0.81
UBFD1-202ENST00000563366 TBX4P57082 545 aa10□□□□□ -0.81
UBFD1-202ENST00000563366 UBE3AQ05086 875 aa10□□□□□ -0.81
UBFD1-202ENST00000563366 ZNF33AQ06730 810 aa10□□□□□ -0.81
UBFD1-202ENST00000563366 TAF10Q12962 218 aa10□□□□□ -0.81
UBFD1-202ENST00000563366 GPS1Q13098 491 aa10□□□□□ -0.81
UBFD1-202ENST00000563366 DPYSQ14117 519 aa10□□□□□ -0.81
UBFD1-202ENST00000563366 TRIP4Q15650 581 aaPredicted RBP10□□□□□ -0.81
UBFD1-202ENST00000563366 SNX30Q5VWJ9 437 aa10□□□□□ -0.81
UBFD1-202ENST00000563366 IZUMO3Q5VZ72 239 aa10□□□□□ -0.81
UBFD1-202ENST00000563366 NUGGCQ68CJ6 796 aa10□□□□□ -0.81
UBFD1-202ENST00000563366 NCBP2-AS2Q69YL0 99 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms