RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 STON1Q9Y6Q2 735 aa10.46□□□□□ -0.73
HERC1-212ENST00000561348 ZFHX2Q9C0A1 2572 aaPredicted RBP10.45□□□□□ -0.74
HERC1-212ENST00000561348 SDK1Q7Z5N4 2213 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 A0A0A0MRY4 1105 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.45□□□□□ -0.74
HERC1-212ENST00000561348 PRR23AA6NEV1 266 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 HAX1O00165 279 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 BNIP3LO60238 219 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 LUC7L3O95232 432 aaKnown RBP10.45□□□□□ -0.74
HERC1-212ENST00000561348 GYPCP04921 128 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 ATP5BP06576 529 aaKnown RBP10.45□□□□□ -0.74
HERC1-212ENST00000561348 PYGBP11216 843 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 TDGF1P13385 188 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 PBX1P40424 430 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 CSKP41240 450 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 IL12RB1P42701 662 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 CXCR3P49682 368 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 IRAK1P51617 712 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 ST8SIA6P61647 398 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 RPL7AP62424 266 aaKnown RBP10.45□□□□□ -0.74
HERC1-212ENST00000561348 PTP4A2Q12974 167 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 ZNF177Q13360 481 aaPredicted RBP10.45□□□□□ -0.74
HERC1-212ENST00000561348 ZNF234Q14588 700 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 ARL13BQ3SXY8 428 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 CCDC14Q49A88 953 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 ACCSLQ4AC99 568 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 USP39Q53GS9 565 aaKnown RBP10.45□□□□□ -0.74
HERC1-212ENST00000561348 BRMS1LQ5PSV4 323 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 OTUD1Q5VV17 481 aaPredicted RBP10.45□□□□□ -0.74
HERC1-212ENST00000561348 TMEM215Q68D42 235 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 SPECC1LQ69YQ0 1117 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 KIAA1211LQ6NV74 962 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 MAMSTRQ6ZN01 415 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 MON1BQ7L1V2 547 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 ARMCX6Q7L4S7 300 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 TMC6Q7Z403 805 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 WDR5BQ86VZ2 330 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 ZNF354CQ86Y25 554 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 AHI1Q8N157 1196 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 CCAR2Q8N163 923 aaKnown RBP10.45□□□□□ -0.74
HERC1-212ENST00000561348 DCLK2Q8N568 766 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 FAM160A2Q8N612 972 aaPredicted RBP10.45□□□□□ -0.74
HERC1-212ENST00000561348 ZBTB44Q8NCP5 570 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 C3orf20Q8ND61 904 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 MDGA1Q8NFP4 955 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 WFIKKN2Q8TEU8 576 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 IGSF8Q969P0 613 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 TTYH3Q9C0H2 523 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 MUC3BQ9H195 1237 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 ANLNQ9NQW6 1124 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 ZNHIT6Q9NWK9 470 aaKnown RBP10.45□□□□□ -0.74
HERC1-212ENST00000561348 MPP6Q9NZW5 540 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 KIAA1522Q9P206 1035 aaPredicted RBP10.45□□□□□ -0.74
HERC1-212ENST00000561348 CNOT8Q9UFF9 292 aaKnown RBP10.45□□□□□ -0.74
HERC1-212ENST00000561348 GMEB2Q9UKD1 530 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 HCN2Q9UL51 889 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 CAPN11Q9UMQ6 739 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 SLC27A6Q9Y2P4 619 aa10.45□□□□□ -0.74
HERC1-212ENST00000561348 A0A1W2PQJ5 194 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 C2CD4BA6NLJ0 364 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 SIGLEC16A6NMB1 481 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 DDX3XO00571 662 aaKnown RBP eCLIP10.44□□□□□ -0.74
HERC1-212ENST00000561348 CCP110O43303 1012 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 TIMM44O43615 452 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 RTN2O75298 545 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 CNTN5O94779 1100 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 SERPING1P05155 500 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 PSMA2P25787 234 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 SCNN1AP37088 669 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 CTSOP43234 321 aaPredicted RBP10.44□□□□□ -0.74
HERC1-212ENST00000561348 SSR1P43307 286 aaKnown RBP10.44□□□□□ -0.74
HERC1-212ENST00000561348 ADKP55263 362 aaKnown RBP10.44□□□□□ -0.74
HERC1-212ENST00000561348 CCDC6Q16204 474 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 FUT11Q495W5 492 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 HSF5Q4G112 596 aaPredicted RBP10.44□□□□□ -0.74
HERC1-212ENST00000561348 FIGNQ5HY92 759 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 CCDC122Q5T0U0 273 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 KBTBD6Q86V97 674 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 DRC7Q8IY82 874 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 APCDD1Q8J025 514 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 FRMD1Q8N878 549 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 FIBINQ8TAL6 211 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 GANCQ8TET4 914 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 GAB3Q8WWW8 586 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 RPL10LQ96L21 214 aaKnown RBP10.44□□□□□ -0.74
HERC1-212ENST00000561348 SPON2Q9BUD6 331 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 RBSNQ9H1K0 784 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 MTG2Q9H4K7 406 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 PARVAQ9NVD7 372 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 THAP10Q9P2Z0 257 aaPredicted RBP10.44□□□□□ -0.74
HERC1-212ENST00000561348 FBXO10Q9UK96 956 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 CYP8B1Q9UNU6 501 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 STARD13Q9Y3M8 1113 aa10.44□□□□□ -0.74
HERC1-212ENST00000561348 BZW2Q9Y6E2 419 aaKnown RBP10.44□□□□□ -0.74
HERC1-212ENST00000561348 A0A1B0GVM2 712 aa10.43□□□□□ -0.74
HERC1-212ENST00000561348 TCAF2A6NFQ2 919 aa10.43□□□□□ -0.74
HERC1-212ENST00000561348 E9PAM4 449 aa10.43□□□□□ -0.74
HERC1-212ENST00000561348 CREB3O43889 395 aa10.43□□□□□ -0.74
HERC1-212ENST00000561348 PAPSS2O95340 614 aaPredicted RBP10.43□□□□□ -0.74
HERC1-212ENST00000561348 RHOCP08134 193 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms