RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 HDAC4P56524 1084 aa15.78■□□□□ 0.12
SNRPA1-213ENST00000560856 LMAN2Q12907 356 aa15.78■□□□□ 0.12
SNRPA1-213ENST00000560856 ARID5BQ14865 1188 aa15.78■□□□□ 0.12
SNRPA1-213ENST00000560856 SPECC1LQ69YQ0 1117 aa15.78■□□□□ 0.12
SNRPA1-213ENST00000560856 PLEKHA7Q6IQ23 1121 aa15.78■□□□□ 0.12
SNRPA1-213ENST00000560856 PPP1R2P3Q6NXS1 205 aa15.78■□□□□ 0.12
SNRPA1-213ENST00000560856 SARM1Q6SZW1 724 aa15.78■□□□□ 0.12
SNRPA1-213ENST00000560856 CHST9Q7L1S5 443 aa15.78■□□□□ 0.12
SNRPA1-213ENST00000560856 ALYREFQ86V81 257 aaKnown RBP15.78■□□□□ 0.12
SNRPA1-213ENST00000560856 CIR1Q86X95 450 aaPredicted RBP15.78■□□□□ 0.12
SNRPA1-213ENST00000560856 FAM131BQ86XD5 332 aa15.78■□□□□ 0.12
SNRPA1-213ENST00000560856 MFN1Q8IWA4 741 aa15.78■□□□□ 0.12
SNRPA1-213ENST00000560856 TSTD1Q8NFU3 115 aa15.78■□□□□ 0.12
SNRPA1-213ENST00000560856 WFIKKN2Q8TEU8 576 aa15.78■□□□□ 0.12
SNRPA1-213ENST00000560856 C1orf74Q96LT6 269 aa15.78■□□□□ 0.12
SNRPA1-213ENST00000560856 SELENOOQ9BVL4 669 aa15.78■□□□□ 0.12
SNRPA1-213ENST00000560856 RBSNQ9H1K0 784 aa15.78■□□□□ 0.12
SNRPA1-213ENST00000560856 ISCUQ9H1K1 167 aa15.78■□□□□ 0.12
SNRPA1-213ENST00000560856 EPC1Q9H2F5 836 aa15.78■□□□□ 0.12
SNRPA1-213ENST00000560856 CACNA2D2Q9NY47 1150 aa15.78■□□□□ 0.12
SNRPA1-213ENST00000560856 ARHGAP20Q9P2F6 1191 aa15.78■□□□□ 0.12
SNRPA1-213ENST00000560856 GGA2Q9UJY4 613 aa15.78■□□□□ 0.12
SNRPA1-213ENST00000560856 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.78■□□□□ 0.121e-7■□□□□ 11.2
SNRPA1-213ENST00000560856 BZW2Q9Y6E2 419 aaKnown RBP15.78■□□□□ 0.12
SNRPA1-213ENST00000560856 GVINP1Q7Z2Y8 2422 aa15.78■□□□□ 0.12
SNRPA1-213ENST00000560856 EML5Q05BV3 1969 aa15.77■□□□□ 0.12
SNRPA1-213ENST00000560856 AXIN1O15169 862 aa15.77■□□□□ 0.12
SNRPA1-213ENST00000560856 RTN2O75298 545 aa15.77■□□□□ 0.12
SNRPA1-213ENST00000560856 SERPING1P05155 500 aa15.77■□□□□ 0.12
SNRPA1-213ENST00000560856 GPD1P21695 349 aa15.77■□□□□ 0.12
SNRPA1-213ENST00000560856 CNR2P34972 360 aa15.77■□□□□ 0.12
SNRPA1-213ENST00000560856 IL12RB1P42701 662 aa15.77■□□□□ 0.12
SNRPA1-213ENST00000560856 OGDHQ02218 1023 aa15.77■□□□□ 0.12
SNRPA1-213ENST00000560856 MAMLD1Q13495 774 aa15.77■□□□□ 0.12
SNRPA1-213ENST00000560856 PTPRNQ16849 979 aa15.77■□□□□ 0.12
SNRPA1-213ENST00000560856 FUT11Q495W5 492 aa15.77■□□□□ 0.12
SNRPA1-213ENST00000560856 KIAA1211LQ6NV74 962 aa15.77■□□□□ 0.12
SNRPA1-213ENST00000560856 DNAJC24Q6P3W2 148 aa15.77■□□□□ 0.12
SNRPA1-213ENST00000560856 SND1Q7KZF4 910 aaKnown RBP eCLIP15.77■□□□□ 0.12
SNRPA1-213ENST00000560856 STRADAQ7RTN6 431 aa15.77■□□□□ 0.12
SNRPA1-213ENST00000560856 CHPFQ8IZ52 775 aa15.77■□□□□ 0.12
SNRPA1-213ENST00000560856 CCAR2Q8N163 923 aaKnown RBP15.77■□□□□ 0.12
SNRPA1-213ENST00000560856 CARNMT1Q8N4J0 409 aa15.77■□□□□ 0.12
SNRPA1-213ENST00000560856 ZNF557Q8N988 423 aaPredicted RBP15.77■□□□□ 0.12
SNRPA1-213ENST00000560856 MDGA1Q8NFP4 955 aa15.77■□□□□ 0.12
SNRPA1-213ENST00000560856 TTC17Q96AE7 1141 aa15.77■□□□□ 0.12
SNRPA1-213ENST00000560856 HAPLN3Q96S86 360 aa15.77■□□□□ 0.12
SNRPA1-213ENST00000560856 SIK2Q9H0K1 926 aa15.77■□□□□ 0.12
SNRPA1-213ENST00000560856 ADAMTS1Q9UHI8 967 aa15.77■□□□□ 0.12
SNRPA1-213ENST00000560856 VANGL2Q9ULK5 521 aa15.77■□□□□ 0.12
SNRPA1-213ENST00000560856 NENFQ9UMX5 172 aa15.77■□□□□ 0.12
SNRPA1-213ENST00000560856 STON1Q9Y6Q2 735 aa15.77■□□□□ 0.12
SNRPA1-213ENST00000560856 IGLV3-10A0A075B6K4 115 aa15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 A0A1B0GVM2 712 aa15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 TCAF2A6NFQ2 919 aa15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 DRGXA6NNA5 263 aa15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 NPC1O15118 1278 aa15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 ATMINO43313 823 aaPredicted RBP15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 LMNAP02545 664 aaKnown RBP15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 HOXB2P14652 356 aa15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 ADRA1BP35368 520 aa15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 ZNF143P52747 638 aaPredicted RBP15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 ZNF234Q14588 700 aa15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 CDO1Q16878 200 aa15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 TTC39BQ5VTQ0 682 aaPredicted RBP15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 MBLAC2Q68D91 279 aa15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 ANO7Q6IWH7 933 aa15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 CXorf57Q6NSI4 855 aaKnown RBP15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 DRC7Q8IY82 874 aa15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 AHI1Q8N157 1196 aa15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 OR52K2Q8NGK3 314 aa15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 FAM172AQ8WUF8 416 aa15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 UCMAQ8WVF2 138 aa15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 ALG14Q96F25 216 aa15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 MYO19Q96H55 970 aa15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 RPRD1AQ96P16 312 aaPredicted RBP15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 MCEEQ96PE7 176 aa15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 DNAJC7Q99615 494 aa15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 MAGEB5Q9BZ81 275 aa15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 CIPCQ9C0C6 399 aa15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 PAXBP1Q9Y5B6 917 aa15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 RAD54BQ9Y620 910 aa15.76■□□□□ 0.11
SNRPA1-213ENST00000560856 A0A087X0T9 212 aa15.75■□□□□ 0.11
SNRPA1-213ENST00000560856 TYW5A2RUC4 315 aaKnown RBP15.75■□□□□ 0.11
SNRPA1-213ENST00000560856 CCP110O43303 1012 aa15.75■□□□□ 0.11
SNRPA1-213ENST00000560856 GFRA3O60609 400 aa15.75■□□□□ 0.11
SNRPA1-213ENST00000560856 CNTN5O94779 1100 aa15.75■□□□□ 0.11
SNRPA1-213ENST00000560856 FAM228BP0C875 321 aa15.75■□□□□ 0.11
SNRPA1-213ENST00000560856 GABRG2P18507 467 aa15.75■□□□□ 0.11
SNRPA1-213ENST00000560856 CSKP41240 450 aa15.75■□□□□ 0.11
SNRPA1-213ENST00000560856 TBX2Q13207 712 aaPredicted RBP15.75■□□□□ 0.11
SNRPA1-213ENST00000560856 CDH18Q13634 790 aa15.75■□□□□ 0.11
SNRPA1-213ENST00000560856 ALFQ53S48 1182 aa15.75■□□□□ 0.11
SNRPA1-213ENST00000560856 TDRD12Q587J7 1177 aaKnown RBP15.75■□□□□ 0.11
SNRPA1-213ENST00000560856 RABGAP1LQ5R372 815 aa15.75■□□□□ 0.11
SNRPA1-213ENST00000560856 ABCA7Q8IZY2 2146 aa15.75■□□□□ 0.11
SNRPA1-213ENST00000560856 APCDD1Q8J025 514 aa15.75■□□□□ 0.11
SNRPA1-213ENST00000560856 OR8K1Q8NGG5 319 aa15.75■□□□□ 0.11
SNRPA1-213ENST00000560856 CYB5D2Q8WUJ1 264 aa15.75■□□□□ 0.11
SNRPA1-213ENST00000560856 GAB3Q8WWW8 586 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms