RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	PDE4C	Q08493	712 aa		7.33	□□□□□ -1.24
MARK3-215	ENST00000558787	NFKBIB	Q15653	356 aa		7.33	□□□□□ -1.24
MARK3-215	ENST00000558787	GOLGA7B	Q2TAP0	167 aa		7.33	□□□□□ -1.24
MARK3-215	ENST00000558787	SKOR2	Q2VWA4	1001 aa	Predicted RBP	7.33	□□□□□ -1.24
MARK3-215	ENST00000558787	EDRF1	Q3B7T1	1238 aa		7.33	□□□□□ -1.24
MARK3-215	ENST00000558787	UAP1L1	Q3KQV9	507 aa		7.33	□□□□□ -1.24
MARK3-215	ENST00000558787	COX20	Q5RI15	118 aa		7.33	□□□□□ -1.24
MARK3-215	ENST00000558787	LPCAT2	Q7L5N7	544 aa		7.33	□□□□□ -1.24
MARK3-215	ENST00000558787	CCDC186	Q7Z3E2	898 aa		7.33	□□□□□ -1.24
MARK3-215	ENST00000558787	PIGZ	Q86VD9	579 aa		7.33	□□□□□ -1.24
MARK3-215	ENST00000558787	CHPF	Q8IZ52	775 aa		7.33	□□□□□ -1.24
MARK3-215	ENST00000558787	FBXL13	Q8NEE6	735 aa		7.33	□□□□□ -1.24
MARK3-215	ENST00000558787	ENGASE	Q8NFI3	743 aa		7.33	□□□□□ -1.24
MARK3-215	ENST00000558787	UBA3	Q8TBC4	463 aa		7.33	□□□□□ -1.24
MARK3-215	ENST00000558787	CD248	Q9HCU0	757 aa		7.33	□□□□□ -1.24
MARK3-215	ENST00000558787	LMBRD1	Q9NUN5	540 aa		7.33	□□□□□ -1.24
MARK3-215	ENST00000558787	CALCOCO1	Q9P1Z2	691 aa		7.33	□□□□□ -1.24
MARK3-215	ENST00000558787	WDR35	Q9P2L0	1181 aa		7.33	□□□□□ -1.24
MARK3-215	ENST00000558787	RASAL2	Q9UJF2	1139 aa		7.33	□□□□□ -1.24
MARK3-215	ENST00000558787	LSM7	Q9UK45	103 aa	Known RBP	7.33	□□□□□ -1.24
MARK3-215	ENST00000558787	CLEC4E	Q9ULY5	219 aa		7.33	□□□□□ -1.24
MARK3-215	ENST00000558787	PCDHA5	Q9Y5H7	936 aa		7.33	□□□□□ -1.24
MARK3-215	ENST00000558787	FRY	Q5TBA9	3013 aa		7.33	□□□□□ -1.24
MARK3-215	ENST00000558787	CHD6	Q8TD26	2715 aa		7.33	□□□□□ -1.24
MARK3-215	ENST00000558787	CACNA1E	Q15878	2313 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	AKAP13	Q12802	2813 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	IGF2R	P11717	2491 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	SLC12A8	A0AV02	714 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787		J3QW42	95 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	CDX4	O14627	284 aa	Predicted RBP	7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	TSPAN3	O60637	253 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	TOP3B	O95985	862 aa	Known RBP	7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	RALA	P11233	206 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	CD19	P15391	556 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	TRIM21	P19474	475 aa	Known RBP	7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	BRD2	P25440	801 aa	Known RBP	7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	CORO1A	P31146	461 aa	Known RBP	7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	MAPK8	P45983	427 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	TKTL1	P51854	596 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	YWHAG	P61981	247 aa	Known RBP eCLIP	7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	ENPEP	Q07075	957 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	GOLGA8F	Q08AF8	430 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	GOLGA8DP	Q0D2H9	430 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	CUL2	Q13617	745 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	GEN1	Q17RS7	908 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	HSF5	Q4G112	596 aa	Predicted RBP	7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	TRIM61	Q5EBN2	209 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	ZNF658	Q5TYW1	1059 aa	Predicted RBP	7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	ARHGAP17	Q68EM7	881 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	KLHDC10	Q6PID8	442 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	RSRC2	Q7L4I2	434 aa	Known RBP	7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	BHLHA9	Q7RTU4	235 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	DENND1C	Q8IV53	801 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	ANKRD52	Q8NB46	1076 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	OR2I1P	Q8NGU4	316 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	IPO4	Q8TEX9	1081 aa	Known RBP	7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	SORCS1	Q8WY21	1168 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	TFAP2B	Q92481	460 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	EDEM1	Q92611	657 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	KAT5	Q92993	513 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	PLD4	Q96BZ4	506 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	XPO6	Q96QU8	1125 aa	Known RBP	7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	SSBP4	Q9BWG4	385 aa	Predicted RBP	7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	ULBP1	Q9BZM6	244 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	PNPLA8	Q9NP80	782 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	CLIC5	Q9NZA1	410 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	AGO1	Q9UL18	857 aa	Known RBP	7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	CYP8B1	Q9UNU6	501 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	NUP205	Q92621	2012 aa		7.32	□□□□□ -1.24
MARK3-215	ENST00000558787	IGHV1OR15-9	A0A0B4J2B8	117 aa		7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	YJEFN3	A6XGL0	299 aa		7.31	□□□□□ -1.24
MARK3-215	ENST00000558787		E7ENQ6	273 aa		7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	STX10	O60499	249 aa		7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	PRMT3	O60678	531 aa		7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	MMP20	O60882	483 aa		7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	SMC2	O95347	1197 aa		7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	ZBED1	O96006	694 aa		7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	PENK	P01210	267 aa	Predicted RBP	7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	CFI	P05156	583 aa		7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	LCP1	P13796	627 aa		7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	SPINK2	P20155	84 aa		7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	BMP6	P22004	513 aa		7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	PML	P29590	882 aa		7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	RGS7	P49802	495 aa		7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	NOVA1	P51513	510 aa	Known RBP	7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	MFAP3	P55082	362 aa		7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	COG7	P83436	770 aa		7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	FKBP3	Q00688	224 aa	Known RBP	7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	RPL6	Q02878	288 aa	Known RBP	7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	RAB41	Q5JT25	222 aa		7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	FYB2	Q5VWT5	728 aa		7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	LYSMD4	Q5XG99	296 aa		7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	SDE2	Q6IQ49	451 aa		7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	KLHL10	Q6JEL2	608 aa		7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	KIAA1324	Q6UXG2	1013 aa	Known RBP	7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	TRMT11	Q7Z4G4	463 aa	Known RBP	7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	C11orf74	Q86VG3	221 aa		7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	SYT12	Q8IV01	421 aa		7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	SLC41A1	Q8IVJ1	513 aa		7.31	□□□□□ -1.24
MARK3-215	ENST00000558787	ZC3H3	Q8IXZ2	948 aa	Known RBP	7.31	□□□□□ -1.24

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