RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 GJC1P36383 396 aa18■□□□□ 0.47
TPM1-214ENST00000558544 DGKGP49619 791 aa18■□□□□ 0.47
TPM1-214ENST00000558544 HADHBP55084 474 aaKnown RBP18■□□□□ 0.47
TPM1-214ENST00000558544 CA9Q16790 459 aa18■□□□□ 0.47
TPM1-214ENST00000558544 C5orf22Q49AR2 442 aa18■□□□□ 0.47
TPM1-214ENST00000558544 TMEM196Q5HYL7 178 aa18■□□□□ 0.47
TPM1-214ENST00000558544 KCNT1Q5JUK3 1230 aa18■□□□□ 0.47
TPM1-214ENST00000558544 TTC39BQ5VTQ0 682 aaPredicted RBP18■□□□□ 0.47
TPM1-214ENST00000558544 RNF43Q68DV7 783 aa18■□□□□ 0.47
TPM1-214ENST00000558544 TXNRD3NBQ6F5E7 133 aa18■□□□□ 0.47
TPM1-214ENST00000558544 ASTLQ6HA08 431 aaPredicted RBP18■□□□□ 0.47
TPM1-214ENST00000558544 PHTF2Q8N3S3 785 aa18■□□□□ 0.47
TPM1-214ENST00000558544 PJA1Q8NG27 643 aa18■□□□□ 0.47
TPM1-214ENST00000558544 EXOC4Q96A65 974 aa18■□□□□ 0.47
TPM1-214ENST00000558544 ZNF830Q96NB3 372 aaPredicted RBP18■□□□□ 0.47
TPM1-214ENST00000558544 DHX35Q9H5Z1 703 aaKnown RBP18■□□□□ 0.47
TPM1-214ENST00000558544 FBXO10Q9UK96 956 aa18■□□□□ 0.47
TPM1-214ENST00000558544 MYO18AQ92614 2054 aaKnown RBP17.99■□□□□ 0.47
TPM1-214ENST00000558544 A0A1B0GVM2 712 aa17.99■□□□□ 0.47
TPM1-214ENST00000558544 TCAF2A6NFQ2 919 aa17.99■□□□□ 0.47
TPM1-214ENST00000558544 FAM170BA6NMN3 283 aa17.99■□□□□ 0.47
TPM1-214ENST00000558544 BTNL10A8MVZ5 291 aa17.99■□□□□ 0.47
TPM1-214ENST00000558544 DLL1O00548 723 aa17.99■□□□□ 0.47
TPM1-214ENST00000558544 CNTN5O94779 1100 aa17.99■□□□□ 0.47
TPM1-214ENST00000558544 EGFP01133 1207 aa17.99■□□□□ 0.47
TPM1-214ENST00000558544 APODP05090 189 aa17.99■□□□□ 0.47
TPM1-214ENST00000558544 CISD3P0C7P0 127 aa17.99■□□□□ 0.47
TPM1-214ENST00000558544 NAP1L1P55209 391 aaKnown RBP17.99■□□□□ 0.47
TPM1-214ENST00000558544 TAS2R40P59535 323 aa17.99■□□□□ 0.47
TPM1-214ENST00000558544 NRG1Q02297 640 aaPredicted RBP17.99■□□□□ 0.47
TPM1-214ENST00000558544 KIF5AQ12840 1032 aa17.99■□□□□ 0.47
TPM1-214ENST00000558544 GRSF1Q12849 480 aaKnown RBP eCLIP17.99■□□□□ 0.47
TPM1-214ENST00000558544 CDH18Q13634 790 aa17.99■□□□□ 0.47
TPM1-214ENST00000558544 ALFQ53S48 1182 aa17.99■□□□□ 0.47
TPM1-214ENST00000558544 ARTNQ5T4W7 220 aa17.99■□□□□ 0.47
TPM1-214ENST00000558544 MANEALQ5VSG8 457 aa17.99■□□□□ 0.47
TPM1-214ENST00000558544 SFTPA1Q8IWL2 248 aa17.99■□□□□ 0.47
TPM1-214ENST00000558544 CCAR2Q8N163 923 aaKnown RBP17.99■□□□□ 0.47
TPM1-214ENST00000558544 ZNF687Q8N1G0 1237 aa17.99■□□□□ 0.47
TPM1-214ENST00000558544 TERB1Q8NA31 727 aa17.99■□□□□ 0.47
TPM1-214ENST00000558544 HSPH1Q92598 858 aa17.99■□□□□ 0.47
TPM1-214ENST00000558544 PBXIP1Q96AQ6 731 aa17.99■□□□□ 0.47
TPM1-214ENST00000558544 KCTD15Q96SI1 283 aaPredicted RBP17.99■□□□□ 0.47
TPM1-214ENST00000558544 GOLPH3Q9H4A6 298 aa17.99■□□□□ 0.47
TPM1-214ENST00000558544 C11orf16Q9NQ32 467 aa17.99■□□□□ 0.47
TPM1-214ENST00000558544 RBM12Q9NTZ6 932 aaKnown RBP17.99■□□□□ 0.47
TPM1-214ENST00000558544 MPP6Q9NZW5 540 aa17.99■□□□□ 0.47
TPM1-214ENST00000558544 HYOU1Q9Y4L1 999 aa17.99■□□□□ 0.47
TPM1-214ENST00000558544 CHD5Q8TDI0 1954 aa17.99■□□□□ 0.47
TPM1-214ENST00000558544 IGLV3-10A0A075B6K4 115 aa17.98■□□□□ 0.47
TPM1-214ENST00000558544 DRGXA6NNA5 263 aa17.98■□□□□ 0.47
TPM1-214ENST00000558544 H0Y626 953 aa17.98■□□□□ 0.47
TPM1-214ENST00000558544 CREB3O43889 395 aa17.98■□□□□ 0.47
TPM1-214ENST00000558544 BUB1BO60566 1050 aaPredicted RBP17.98■□□□□ 0.47
TPM1-214ENST00000558544 LRIG2O94898 1065 aa17.98■□□□□ 0.47
TPM1-214ENST00000558544 KAT7O95251 611 aa17.98■□□□□ 0.47
TPM1-214ENST00000558544 CCDC175P0C221 793 aa17.98■□□□□ 0.47
TPM1-214ENST00000558544 RARAP10276 462 aa17.98■□□□□ 0.47
TPM1-214ENST00000558544 DRD1P21728 446 aa17.98■□□□□ 0.47
TPM1-214ENST00000558544 HADHQ16836 314 aaKnown RBP17.98■□□□□ 0.47
TPM1-214ENST00000558544 RWDD4Q6NW29 188 aaKnown RBP17.98■□□□□ 0.47
TPM1-214ENST00000558544 CCDC117Q8IWD4 279 aaPredicted RBP17.98■□□□□ 0.47
TPM1-214ENST00000558544 SUGP1Q8IWZ8 645 aaKnown RBP17.98■□□□□ 0.47
TPM1-214ENST00000558544 CCDC105Q8IYK2 499 aa17.98■□□□□ 0.47
TPM1-214ENST00000558544 TPCN2Q8NHX9 752 aa17.98■□□□□ 0.47
TPM1-214ENST00000558544 EZH1Q92800 747 aaPredicted RBP17.98■□□□□ 0.47
TPM1-214ENST00000558544 TBC1D31Q96DN5 1066 aa17.98■□□□□ 0.47
TPM1-214ENST00000558544 EPAS1Q99814 870 aa17.98■□□□□ 0.47
TPM1-214ENST00000558544 SLC2A11Q9BYW1 496 aa17.98■□□□□ 0.47
TPM1-214ENST00000558544 ZYG11BQ9C0D3 744 aa17.98■□□□□ 0.47
TPM1-214ENST00000558544 NEU3Q9UQ49 428 aa17.98■□□□□ 0.47
TPM1-214ENST00000558544 MACROD2A1Z1Q3 448 aa17.97■□□□□ 0.47
TPM1-214ENST00000558544 MUC22E2RYF6 1773 aaPredicted RBP17.97■□□□□ 0.47
TPM1-214ENST00000558544 HLA-FP30511 346 aa17.97■□□□□ 0.47
TPM1-214ENST00000558544 L1CAMP32004 1257 aa17.97■□□□□ 0.47
TPM1-214ENST00000558544 CD70P32970 193 aa17.97■□□□□ 0.47
TPM1-214ENST00000558544 GRIA2P42262 883 aa17.97■□□□□ 0.47
TPM1-214ENST00000558544 CDH4P55283 916 aa17.97■□□□□ 0.47
TPM1-214ENST00000558544 SEMA3BQ13214 749 aa17.97■□□□□ 0.47
TPM1-214ENST00000558544 CCINQ13939 588 aa17.97■□□□□ 0.47
TPM1-214ENST00000558544 PREPLQ4J6C6 727 aaPredicted RBP17.97■□□□□ 0.47
TPM1-214ENST00000558544 BOLA3Q53S33 107 aa17.97■□□□□ 0.47
TPM1-214ENST00000558544 PPP6R3Q5H9R7 873 aaPredicted RBP17.97■□□□□ 0.47
TPM1-214ENST00000558544 FSCBQ5H9T9 825 aa17.97■□□□□ 0.47
TPM1-214ENST00000558544 CHST9Q7L1S5 443 aa17.97■□□□□ 0.47
TPM1-214ENST00000558544 ANKS1BQ7Z6G8 1248 aa17.97■□□□□ 0.47
TPM1-214ENST00000558544 TFAP2DQ7Z6R9 452 aa17.97■□□□□ 0.47
TPM1-214ENST00000558544 NELL2Q99435 816 aa17.97■□□□□ 0.47
TPM1-214ENST00000558544 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.97■□□□□ 0.47
TPM1-214ENST00000558544 ABCB8Q9NUT2 735 aa17.97■□□□□ 0.47
TPM1-214ENST00000558544 PPARGC1AQ9UBK2 798 aaKnown RBP17.97■□□□□ 0.47
TPM1-214ENST00000558544 SIT1Q9Y3P8 196 aa17.97■□□□□ 0.47
TPM1-214ENST00000558544 TBC1D3BA6NDS4 549 aa17.96■□□□□ 0.47
TPM1-214ENST00000558544 SPOPO43791 374 aa17.96■□□□□ 0.47
TPM1-214ENST00000558544 CLDN11O75508 207 aa17.96■□□□□ 0.47
TPM1-214ENST00000558544 DCNP07585 359 aaKnown RBP17.96■□□□□ 0.47
TPM1-214ENST00000558544 CHRNB1P11230 501 aa17.96■□□□□ 0.47
TPM1-214ENST00000558544 COMTP21964 271 aa17.96■□□□□ 0.47
TPM1-214ENST00000558544 SLC1A1P43005 524 aa17.96■□□□□ 0.47
TPM1-214ENST00000558544 SEC13P55735 322 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms