RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 SALL4Q9UJQ4 1053 aa12.68□□□□□ -0.38
ABCD4-226ENST00000556971 PLA2G4CQ9UP65 541 aa12.68□□□□□ -0.38
ABCD4-226ENST00000556971 DMTF1Q9Y222 760 aa12.68□□□□□ -0.38
ABCD4-226ENST00000556971 PRRC2AP48634 2157 aaKnown RBP12.67□□□□□ -0.38
ABCD4-226ENST00000556971 SLC16A4O15374 487 aa12.67□□□□□ -0.38
ABCD4-226ENST00000556971 CAPN5O15484 640 aaPredicted RBP12.67□□□□□ -0.38
ABCD4-226ENST00000556971 TIMM44O43615 452 aa12.67□□□□□ -0.38
ABCD4-226ENST00000556971 ZG16O60844 167 aa12.67□□□□□ -0.38
ABCD4-226ENST00000556971 HUS1O60921 280 aa12.67□□□□□ -0.38
ABCD4-226ENST00000556971 TBX18O95935 607 aa12.67□□□□□ -0.38
ABCD4-226ENST00000556971 RPLP0P05388 317 aaKnown RBP12.67□□□□□ -0.38
ABCD4-226ENST00000556971 PSMD8P48556 350 aa12.67□□□□□ -0.38
ABCD4-226ENST00000556971 TUBP50607 506 aa12.67□□□□□ -0.38
ABCD4-226ENST00000556971 ARSDP51689 593 aa12.67□□□□□ -0.38
ABCD4-226ENST00000556971 CACNA2D1P54289 1103 aa12.67□□□□□ -0.38
ABCD4-226ENST00000556971 HNRNPKP61978 463 aaKnown RBP eCLIP12.67□□□□□ -0.381e-7■■■■□ 26.3
ABCD4-226ENST00000556971 CCL7P80098 99 aa12.67□□□□□ -0.38
ABCD4-226ENST00000556971 STRN3Q13033 797 aa12.67□□□□□ -0.38
ABCD4-226ENST00000556971 NPY5RQ15761 445 aa12.67□□□□□ -0.38
ABCD4-226ENST00000556971 TMEM164Q5U3C3 297 aa12.67□□□□□ -0.38
ABCD4-226ENST00000556971 Q6ZNB5 142 aa12.67□□□□□ -0.38
ABCD4-226ENST00000556971 CATSPER3Q86XQ3 398 aa12.67□□□□□ -0.38
ABCD4-226ENST00000556971 MMAAQ8IVH4 418 aaKnown RBP12.67□□□□□ -0.38
ABCD4-226ENST00000556971 SDR16C5Q8N3Y7 309 aa12.67□□□□□ -0.38
ABCD4-226ENST00000556971 OR13H1Q8NG92 308 aa12.67□□□□□ -0.38
ABCD4-226ENST00000556971 ZNF560Q96MR9 790 aa12.67□□□□□ -0.38
ABCD4-226ENST00000556971 CMKLR1Q99788 373 aa12.67□□□□□ -0.38
ABCD4-226ENST00000556971 CRTAC1Q9NQ79 661 aa12.67□□□□□ -0.38
ABCD4-226ENST00000556971 SH3GLB2Q9NR46 395 aa12.67□□□□□ -0.38
ABCD4-226ENST00000556971 TMEM30AQ9NV96 361 aa12.67□□□□□ -0.38
ABCD4-226ENST00000556971 TLK1Q9UKI8 766 aa12.67□□□□□ -0.38
ABCD4-226ENST00000556971 PCDHA12Q9UN75 941 aa12.67□□□□□ -0.38
ABCD4-226ENST00000556971 ABCA4P78363 2273 aa12.66□□□□□ -0.38
ABCD4-226ENST00000556971 CCDC196A0A1B0GTZ2 297 aa12.66□□□□□ -0.38
ABCD4-226ENST00000556971 A0A1W2PQM1 296 aa12.66□□□□□ -0.38
ABCD4-226ENST00000556971 PRAMEF26H0Y7S4 382 aa12.66□□□□□ -0.38
ABCD4-226ENST00000556971 RIOK3O14730 519 aaKnown RBP12.66□□□□□ -0.38
ABCD4-226ENST00000556971 KRT86O43790 486 aa12.66□□□□□ -0.38
ABCD4-226ENST00000556971 FAM189A1O60320 539 aa12.66□□□□□ -0.38
ABCD4-226ENST00000556971 TLR5O60602 858 aa12.66□□□□□ -0.38
ABCD4-226ENST00000556971 RNASEH1O60930 286 aaKnown RBP12.66□□□□□ -0.38
ABCD4-226ENST00000556971 RFPL1O75677 317 aa12.66□□□□□ -0.38
ABCD4-226ENST00000556971 CBX6O95503 412 aa12.66□□□□□ -0.38
ABCD4-226ENST00000556971 ADRB2P07550 413 aa12.66□□□□□ -0.38
ABCD4-226ENST00000556971 COX6B1P14854 86 aa12.66□□□□□ -0.38
ABCD4-226ENST00000556971 RPIAP49247 311 aa12.66□□□□□ -0.38
ABCD4-226ENST00000556971 GOLGA8FQ08AF8 430 aa12.66□□□□□ -0.38
ABCD4-226ENST00000556971 GOLGA8DPQ0D2H9 430 aa12.66□□□□□ -0.38
ABCD4-226ENST00000556971 Q71RC1 249 aaPredicted RBP12.66□□□□□ -0.38
ABCD4-226ENST00000556971 SND1Q7KZF4 910 aaKnown RBP eCLIP12.66□□□□□ -0.38
ABCD4-226ENST00000556971 SLC22A18ASQ8N1D0 253 aa12.66□□□□□ -0.38
ABCD4-226ENST00000556971 OVCA2Q8WZ82 227 aa12.66□□□□□ -0.38
ABCD4-226ENST00000556971 C8orf48Q96LL4 319 aa12.66□□□□□ -0.38
ABCD4-226ENST00000556971 NOX5Q96PH1 765 aa12.66□□□□□ -0.38
ABCD4-226ENST00000556971 CPEB1Q9BZB8 566 aaKnown RBP12.66□□□□□ -0.38
ABCD4-226ENST00000556971 INTS2Q9H0H0 1204 aaKnown RBP12.66□□□□□ -0.38
ABCD4-226ENST00000556971 KCTD3Q9Y597 815 aa12.66□□□□□ -0.38
ABCD4-226ENST00000556971 ANKUB1A6NFN9 424 aa12.65□□□□□ -0.38
ABCD4-226ENST00000556971 GRID2O43424 1007 aa12.65□□□□□ -0.38
ABCD4-226ENST00000556971 RAD1O60671 282 aa12.65□□□□□ -0.38
ABCD4-226ENST00000556971 SIN3BO75182 1162 aa12.65□□□□□ -0.38
ABCD4-226ENST00000556971 SLC8A1P32418 973 aa12.65□□□□□ -0.38
ABCD4-226ENST00000556971 PGFP49763 221 aa12.65□□□□□ -0.38
ABCD4-226ENST00000556971 ZPBP2Q6X784 338 aa12.65□□□□□ -0.38
ABCD4-226ENST00000556971 AHI1Q8N157 1196 aa12.65□□□□□ -0.38
ABCD4-226ENST00000556971 TMEM86AQ8N2M4 240 aa12.65□□□□□ -0.38
ABCD4-226ENST00000556971 TMEM145Q8NBT3 493 aa12.65□□□□□ -0.38
ABCD4-226ENST00000556971 STARD8Q92502 1023 aa12.65□□□□□ -0.38
ABCD4-226ENST00000556971 NDRG1Q92597 394 aaKnown RBP12.65□□□□□ -0.38
ABCD4-226ENST00000556971 CCDC74AQ96AQ1 378 aa12.65□□□□□ -0.38
ABCD4-226ENST00000556971 TMEM159Q96B96 161 aa12.65□□□□□ -0.38
ABCD4-226ENST00000556971 C19orf60Q96EN9 201 aa12.65□□□□□ -0.38
ABCD4-226ENST00000556971 PCED1BQ96HM7 432 aa12.65□□□□□ -0.38
ABCD4-226ENST00000556971 IL12RB2Q99665 862 aa12.65□□□□□ -0.38
ABCD4-226ENST00000556971 BOCQ9BWV1 1114 aa12.65□□□□□ -0.38
ABCD4-226ENST00000556971 FZD3Q9NPG1 666 aa12.65□□□□□ -0.38
ABCD4-226ENST00000556971 FLNAP21333 2647 aaKnown RBP12.64□□□□□ -0.39
ABCD4-226ENST00000556971 MAP1AP78559 2803 aaPredicted RBP12.64□□□□□ -0.39
ABCD4-226ENST00000556971 NYNRINQ9P2P1 1898 aaKnown RBP12.64□□□□□ -0.39
ABCD4-226ENST00000556971 AQP9O43315 295 aa12.64□□□□□ -0.39
ABCD4-226ENST00000556971 CCL4P13236 92 aa12.64□□□□□ -0.39
ABCD4-226ENST00000556971 PRLRP16471 622 aa12.64□□□□□ -0.39
ABCD4-226ENST00000556971 GOT1P17174 413 aa12.64□□□□□ -0.39
ABCD4-226ENST00000556971 BPIP17213 487 aa12.64□□□□□ -0.39
ABCD4-226ENST00000556971 NUDT1P36639 197 aa12.64□□□□□ -0.39
ABCD4-226ENST00000556971 PER3P56645 1201 aa12.64□□□□□ -0.39
ABCD4-226ENST00000556971 PTK2BQ14289 1009 aa12.64□□□□□ -0.39
ABCD4-226ENST00000556971 SETMARQ53H47 684 aaPredicted RBP12.64□□□□□ -0.39
ABCD4-226ENST00000556971 SNX30Q5VWJ9 437 aa12.64□□□□□ -0.39
ABCD4-226ENST00000556971 CHST9Q7L1S5 443 aa12.64□□□□□ -0.39
ABCD4-226ENST00000556971 ZC3H3Q8IXZ2 948 aaKnown RBP12.64□□□□□ -0.39
ABCD4-226ENST00000556971 UNC5BQ8IZJ1 945 aa12.64□□□□□ -0.39
ABCD4-226ENST00000556971 ZNF295-AS1Q8N0V1 137 aa12.64□□□□□ -0.39
ABCD4-226ENST00000556971 DAW1Q8N136 415 aa12.64□□□□□ -0.39
ABCD4-226ENST00000556971 SCAMP5Q8TAC9 235 aa12.64□□□□□ -0.39
ABCD4-226ENST00000556971 LMX1AQ8TE12 382 aa12.64□□□□□ -0.39
ABCD4-226ENST00000556971 GLMNQ92990 594 aa12.64□□□□□ -0.39
ABCD4-226ENST00000556971 BICD1Q96G01 975 aa12.64□□□□□ -0.39
ABCD4-226ENST00000556971 RNF26Q9BY78 433 aaPredicted RBP12.64□□□□□ -0.39
ABCD4-226ENST00000556971 TUFT1Q9NNX1 390 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms