RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 MRGPRX3Q96LB0 322 aa13.79□□□□□ -0.2
TGFB3-204ENST00000556285 GTPBP4Q9BZE4 634 aaKnown RBP13.79□□□□□ -0.2
TGFB3-204ENST00000556285 INTS2Q9H0H0 1204 aaKnown RBP13.79□□□□□ -0.2
TGFB3-204ENST00000556285 ST7Q9NRC1 585 aa13.79□□□□□ -0.2
TGFB3-204ENST00000556285 TM7SF3Q9NS93 570 aa13.79□□□□□ -0.2
TGFB3-204ENST00000556285 TJP2Q9UDY2 1190 aa13.79□□□□□ -0.2
TGFB3-204ENST00000556285 SERGEFQ9UGK8 458 aa13.79□□□□□ -0.2
TGFB3-204ENST00000556285 HOOK1Q9UJC3 728 aaKnown RBP13.79□□□□□ -0.2
TGFB3-204ENST00000556285 PCOLCE2Q9UKZ9 415 aa13.79□□□□□ -0.2
TGFB3-204ENST00000556285 BTBD3Q9Y2F9 522 aa13.79□□□□□ -0.2
TGFB3-204ENST00000556285 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.79□□□□□ -0.2
TGFB3-204ENST00000556285 PCDHB9Q9Y5E1 797 aa13.79□□□□□ -0.2
TGFB3-204ENST00000556285 SNX11Q9Y5W9 270 aa13.79□□□□□ -0.2
TGFB3-204ENST00000556285 CABIN1Q9Y6J0 2220 aa13.79□□□□□ -0.2
TGFB3-204ENST00000556285 ATRXP46100 2492 aa13.78□□□□□ -0.2
TGFB3-204ENST00000556285 FBXO21O94952 628 aa13.78□□□□□ -0.2
TGFB3-204ENST00000556285 FSBPO95073 299 aa13.78□□□□□ -0.2
TGFB3-204ENST00000556285 SEMA4FO95754 770 aa13.78□□□□□ -0.2
TGFB3-204ENST00000556285 MOCS2O96007 188 aaPredicted RBP13.78□□□□□ -0.2
TGFB3-204ENST00000556285 ATP5BP06576 529 aaKnown RBP13.78□□□□□ -0.2
TGFB3-204ENST00000556285 CSKP41240 450 aa13.78□□□□□ -0.2
TGFB3-204ENST00000556285 CTSOP43234 321 aaPredicted RBP13.78□□□□□ -0.2
TGFB3-204ENST00000556285 RPL34P49207 117 aaKnown RBP13.78□□□□□ -0.2
TGFB3-204ENST00000556285 NUCB2P80303 420 aa13.78□□□□□ -0.2
TGFB3-204ENST00000556285 APBA1Q02410 837 aa13.78□□□□□ -0.2
TGFB3-204ENST00000556285 GCNT1Q02742 428 aa13.78□□□□□ -0.2
TGFB3-204ENST00000556285 HNRNPDQ14103 355 aaKnown RBP13.78□□□□□ -0.2
TGFB3-204ENST00000556285 STILQ15468 1287 aa13.78□□□□□ -0.2
TGFB3-204ENST00000556285 MS4A13Q5J8X5 152 aa13.78□□□□□ -0.2
TGFB3-204ENST00000556285 GJB7Q6PEY0 223 aa13.78□□□□□ -0.2
TGFB3-204ENST00000556285 DHX40Q8IX18 779 aaKnown RBP13.78□□□□□ -0.2
TGFB3-204ENST00000556285 ELOA2Q8IYF1 753 aaPredicted RBP13.78□□□□□ -0.2
TGFB3-204ENST00000556285 HJURPQ8NCD3 748 aaPredicted RBP13.78□□□□□ -0.2
TGFB3-204ENST00000556285 BAHD1Q8TBE0 780 aaPredicted RBP13.78□□□□□ -0.2
TGFB3-204ENST00000556285 MDM1Q8TC05 714 aa13.78□□□□□ -0.2
TGFB3-204ENST00000556285 GOLGA1Q92805 767 aa13.78□□□□□ -0.2
TGFB3-204ENST00000556285 AZIN2Q96A70 460 aa13.78□□□□□ -0.2
TGFB3-204ENST00000556285 TTC17Q96AE7 1141 aa13.78□□□□□ -0.2
TGFB3-204ENST00000556285 FAM149B1Q96BN6 582 aa13.78□□□□□ -0.2
TGFB3-204ENST00000556285 ORAI3Q9BRQ5 295 aa13.78□□□□□ -0.2
TGFB3-204ENST00000556285 SRRTQ9BXP5 876 aaKnown RBP13.78□□□□□ -0.2
TGFB3-204ENST00000556285 RSPH9Q9H1X1 276 aaPredicted RBP13.78□□□□□ -0.2
TGFB3-204ENST00000556285 TM9SF3Q9HD45 589 aa13.78□□□□□ -0.2
TGFB3-204ENST00000556285 CNTN6Q9UQ52 1028 aa13.78□□□□□ -0.2
TGFB3-204ENST00000556285 ANKRD11Q6UB99 2663 aaPredicted RBP13.78□□□□□ -0.2
TGFB3-204ENST00000556285 H0Y626 953 aa13.77□□□□□ -0.21
TGFB3-204ENST00000556285 P4HA2O15460 535 aa13.77□□□□□ -0.21
TGFB3-204ENST00000556285 IRAK2O43187 625 aa13.77□□□□□ -0.21
TGFB3-204ENST00000556285 PAPSS1O43252 624 aaPredicted RBP13.77□□□□□ -0.21
TGFB3-204ENST00000556285 SIN3BO75182 1162 aa13.77□□□□□ -0.21
TGFB3-204ENST00000556285 TRIM16O95361 564 aa13.77□□□□□ -0.21
TGFB3-204ENST00000556285 CER1O95813 267 aa13.77□□□□□ -0.21
TGFB3-204ENST00000556285 DNTTP04053 509 aa13.77□□□□□ -0.21
TGFB3-204ENST00000556285 KRT5P13647 590 aa13.77□□□□□ -0.21
TGFB3-204ENST00000556285 TAF5Q15542 800 aa13.77□□□□□ -0.21
TGFB3-204ENST00000556285 DCAF6Q58WW2 860 aa13.77□□□□□ -0.21
TGFB3-204ENST00000556285 ZC3H12AQ5D1E8 599 aaKnown RBP13.77□□□□□ -0.21
TGFB3-204ENST00000556285 ZNF776Q68DI1 518 aaPredicted RBP13.77□□□□□ -0.21
TGFB3-204ENST00000556285 LGI2Q8N0V4 545 aa13.77□□□□□ -0.21
TGFB3-204ENST00000556285 SLC4A5Q9BY07 1137 aa13.77□□□□□ -0.21
TGFB3-204ENST00000556285 BTBD1Q9H0C5 482 aa13.77□□□□□ -0.21
TGFB3-204ENST00000556285 PCED1AQ9H1Q7 454 aa13.77□□□□□ -0.21
TGFB3-204ENST00000556285 UBE2TQ9NPD8 197 aaPredicted RBP13.77□□□□□ -0.21
TGFB3-204ENST00000556285 TLR6Q9Y2C9 796 aa13.77□□□□□ -0.21
TGFB3-204ENST00000556285 SSUH2Q9Y2M2 353 aa13.77□□□□□ -0.21
TGFB3-204ENST00000556285 GPSM3Q9Y4H4 160 aa13.77□□□□□ -0.21
TGFB3-204ENST00000556285 TTC34A8MYJ7 566 aa13.76□□□□□ -0.21
TGFB3-204ENST00000556285 E5RJQ4 531 aa13.76□□□□□ -0.21
TGFB3-204ENST00000556285 LETM1O95202 739 aaPredicted RBP13.76□□□□□ -0.21
TGFB3-204ENST00000556285 AFPP02771 609 aaKnown RBP13.76□□□□□ -0.21
TGFB3-204ENST00000556285 IGHV4-34P06331 123 aa13.76□□□□□ -0.21
TGFB3-204ENST00000556285 ATXN1LP0C7T5 689 aaKnown RBP13.76□□□□□ -0.21
TGFB3-204ENST00000556285 ZNF883P0CG24 379 aa13.76□□□□□ -0.21
TGFB3-204ENST00000556285 RDXP35241 583 aaKnown RBP13.76□□□□□ -0.21
TGFB3-204ENST00000556285 AFF3P51826 1226 aaKnown RBP13.76□□□□□ -0.21
TGFB3-204ENST00000556285 CETN1Q12798 172 aa13.76□□□□□ -0.21
TGFB3-204ENST00000556285 PITRM1Q5JRX3 1037 aa13.76□□□□□ -0.21
TGFB3-204ENST00000556285 C9orf64Q5T6V5 341 aa13.76□□□□□ -0.21
TGFB3-204ENST00000556285 RAP1GAP2Q684P5 730 aa13.76□□□□□ -0.21
TGFB3-204ENST00000556285 CCNI2Q6ZMN8 369 aaPredicted RBP13.76□□□□□ -0.21
TGFB3-204ENST00000556285 DBX2Q6ZNG2 339 aa13.76□□□□□ -0.21
TGFB3-204ENST00000556285 CIR1Q86X95 450 aaPredicted RBP13.76□□□□□ -0.21
TGFB3-204ENST00000556285 APCDD1Q8J025 514 aa13.76□□□□□ -0.21
TGFB3-204ENST00000556285 SERPINB11Q96P15 392 aa13.76□□□□□ -0.21
TGFB3-204ENST00000556285 MED15Q96RN5 788 aa13.76□□□□□ -0.21
TGFB3-204ENST00000556285 CRACR2AQ9BSW2 395 aa13.76□□□□□ -0.21
TGFB3-204ENST00000556285 IRX2Q9BZI1 471 aaPredicted RBP13.76□□□□□ -0.21
TGFB3-204ENST00000556285 PABPC3Q9H361 631 aaKnown RBP13.76□□□□□ -0.21
TGFB3-204ENST00000556285 EBF2Q9HAK2 575 aa13.76□□□□□ -0.21
TGFB3-204ENST00000556285 SUN2Q9UH99 717 aa13.76□□□□□ -0.21
TGFB3-204ENST00000556285 SLCO3A1Q9UIG8 710 aa13.76□□□□□ -0.21
TGFB3-204ENST00000556285 ERVW-1Q9UQF0 538 aa13.76□□□□□ -0.21
TGFB3-204ENST00000556285 ANKRD6Q9Y2G4 727 aa13.76□□□□□ -0.21
TGFB3-204ENST00000556285 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.76□□□□□ -0.21
TGFB3-204ENST00000556285 GOLGA4Q13439 2230 aaKnown RBP13.76□□□□□ -0.21
TGFB3-204ENST00000556285 A0A1W2PP55 124 aa13.75□□□□□ -0.21
TGFB3-204ENST00000556285 BICDL2A1A5D9 508 aa13.75□□□□□ -0.21
TGFB3-204ENST00000556285 FAM47DPA6NHR8 397 aa13.75□□□□□ -0.21
TGFB3-204ENST00000556285 GOLGA8CPA6NN73 597 aa13.75□□□□□ -0.21
TGFB3-204ENST00000556285 BECN2A8MW95 431 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms