RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 TCAF2A6NFQ2 919 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 FAM170BA6NMN3 283 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 FAM72CH0Y354 149 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 H0Y626 953 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 KRT86O43790 486 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 CREB3O43889 395 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 CLDN11O75508 207 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 LRIG2O94898 1065 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 APODP05090 189 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 RARAP10276 462 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 SLC25A11Q02978 314 aaKnown RBP14.59□□□□□ -0.07
SNX6-206ENST00000556162 CDH18Q13634 790 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 SMTNL2Q2TAL5 461 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 TMEM196Q5HYL7 178 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 FAM72AQ5TYM5 149 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 FAM72DQ6L9T8 149 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 RWDD4Q6NW29 188 aaKnown RBP14.59□□□□□ -0.07
SNX6-206ENST00000556162 DAAM2Q86T65 1068 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 FAM72BQ86X60 149 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 CCAR2Q8N163 923 aaKnown RBP14.59□□□□□ -0.07
SNX6-206ENST00000556162 TPCN2Q8NHX9 752 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 TEKT4Q8WW24 435 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 ZYG11BQ9C0D3 744 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 KCNF1Q9H3M0 494 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 LTB4R2Q9NPC1 389 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 PPARGC1AQ9UBK2 798 aaKnown RBP14.59□□□□□ -0.07
SNX6-206ENST00000556162 CLEC4EQ9ULY5 219 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 ALG6Q9Y672 507 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 COL4A2P08572 1712 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.59□□□□□ -0.07
SNX6-206ENST00000556162 A0A0U1RQJ8 604 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 MACROD2A1Z1Q3 448 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 TBC1D3BA6NDS4 549 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 TRIM24O15164 1050 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 NCAM2O15394 837 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 SPOPO43791 374 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 LUC7L3O95232 432 aaKnown RBP14.59□□□□□ -0.07
SNX6-206ENST00000556162 KAT7O95251 611 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 KRT7P08729 469 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 CISD3P0C7P0 127 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 GRIA2P42262 883 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 CDH4P55283 916 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 KDSRQ06136 332 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 ZNF177Q13360 481 aaPredicted RBP14.59□□□□□ -0.07
SNX6-206ENST00000556162 RNF43Q68DV7 783 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 CYP4V2Q6ZWL3 525 aaPredicted RBP14.59□□□□□ -0.07
SNX6-206ENST00000556162 CHST9Q7L1S5 443 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 CIR1Q86X95 450 aaPredicted RBP14.59□□□□□ -0.07
SNX6-206ENST00000556162 CPNE8Q86YQ8 564 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 FIBINQ8TAL6 211 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 ATRIPQ8WXE1 791 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 HSPH1Q92598 858 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 PBXIP1Q96AQ6 731 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 TBC1D31Q96DN5 1066 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 FOXQ1Q9C009 403 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 MPP6Q9NZW5 540 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 TRIM10Q9UDY6 481 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 SLC27A6Q9Y2P4 619 aa14.59□□□□□ -0.07
SNX6-206ENST00000556162 CNTN5O94779 1100 aa14.58□□□□□ -0.08
SNX6-206ENST00000556162 PDGFBP01127 241 aaPredicted RBP14.58□□□□□ -0.08
SNX6-206ENST00000556162 COMTP21964 271 aa14.58□□□□□ -0.08
SNX6-206ENST00000556162 TARSP26639 723 aaKnown RBP14.58□□□□□ -0.08
SNX6-206ENST00000556162 ZNF135P52742 658 aaPredicted RBP14.58□□□□□ -0.08
SNX6-206ENST00000556162 TAS2R40P59535 323 aa14.58□□□□□ -0.08
SNX6-206ENST00000556162 CA9Q16790 459 aa14.58□□□□□ -0.08
SNX6-206ENST00000556162 PPP6R3Q5H9R7 873 aaPredicted RBP14.58□□□□□ -0.08
SNX6-206ENST00000556162 MANEALQ5VSG8 457 aa14.58□□□□□ -0.08
SNX6-206ENST00000556162 TXNRD3NBQ6F5E7 133 aa14.58□□□□□ -0.08
SNX6-206ENST00000556162 FSTL4Q6MZW2 842 aa14.58□□□□□ -0.08
SNX6-206ENST00000556162 C11orf63Q6NUN7 778 aa14.58□□□□□ -0.08
SNX6-206ENST00000556162 RNF10Q8N5U6 811 aaKnown RBP14.58□□□□□ -0.08
SNX6-206ENST00000556162 KIAA1524Q8TCG1 905 aa14.58□□□□□ -0.08
SNX6-206ENST00000556162 OSBPL6Q9BZF3 934 aa14.58□□□□□ -0.08
SNX6-206ENST00000556162 RETREG1Q9H6L5 497 aa14.58□□□□□ -0.08
SNX6-206ENST00000556162 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.58□□□□□ -0.08
SNX6-206ENST00000556162 PPP2R2CQ9Y2T4 447 aa14.58□□□□□ -0.08
SNX6-206ENST00000556162 SIT1Q9Y3P8 196 aa14.58□□□□□ -0.08
SNX6-206ENST00000556162 MTF2Q9Y483 593 aaPredicted RBP14.58□□□□□ -0.08
SNX6-206ENST00000556162 HYOU1Q9Y4L1 999 aa14.58□□□□□ -0.08
SNX6-206ENST00000556162 TECTAO75443 2155 aa14.58□□□□□ -0.08
SNX6-206ENST00000556162 A0A0A0MRY4 1105 aa14.57□□□□□ -0.08
SNX6-206ENST00000556162 EPHB2P29323 1055 aa14.57□□□□□ -0.08
SNX6-206ENST00000556162 HTR7P34969 479 aa14.57□□□□□ -0.08
SNX6-206ENST00000556162 GJC1P36383 396 aa14.57□□□□□ -0.08
SNX6-206ENST00000556162 IRAK1P51617 712 aa14.57□□□□□ -0.08
SNX6-206ENST00000556162 SEMA3BQ13214 749 aa14.57□□□□□ -0.08
SNX6-206ENST00000556162 DPYSL2Q16555 572 aa14.57□□□□□ -0.08
SNX6-206ENST00000556162 ALFQ53S48 1182 aa14.57□□□□□ -0.08
SNX6-206ENST00000556162 DGKKQ5KSL6 1271 aa14.57□□□□□ -0.08
SNX6-206ENST00000556162 ZFYVE27Q5T4F4 411 aa14.57□□□□□ -0.08
SNX6-206ENST00000556162 ASTLQ6HA08 431 aaPredicted RBP14.57□□□□□ -0.08
SNX6-206ENST00000556162 ZNF662Q6ZS27 426 aa14.57□□□□□ -0.08
SNX6-206ENST00000556162 POLNQ7Z5Q5 900 aa14.57□□□□□ -0.08
SNX6-206ENST00000556162 PHTF2Q8N3S3 785 aa14.57□□□□□ -0.08
SNX6-206ENST00000556162 TERB1Q8NA31 727 aa14.57□□□□□ -0.08
SNX6-206ENST00000556162 KCTD15Q96SI1 283 aaPredicted RBP14.57□□□□□ -0.08
SNX6-206ENST00000556162 LMAN1LQ9HAT1 526 aa14.57□□□□□ -0.08
SNX6-206ENST00000556162 ABCB8Q9NUT2 735 aa14.57□□□□□ -0.08
SNX6-206ENST00000556162 KIAA1522Q9P206 1035 aaPredicted RBP14.57□□□□□ -0.08
SNX6-206ENST00000556162 GUCA1BQ9UMX6 200 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms