RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 RPRD1AQ96P16 312 aaPredicted RBP13.08□□□□□ -0.32
SYNE2-219ENST00000555323 EPAS1Q99814 870 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 ZYG11BQ9C0D3 744 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 GOLPH3Q9H4A6 298 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 DHX35Q9H5Z1 703 aaKnown RBP13.08□□□□□ -0.32
SYNE2-219ENST00000555323 ZWILCHQ9H900 591 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 GPATCH2LQ9NWQ4 482 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 PLK2Q9NYY3 685 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 RCOR3Q9P2K3 495 aaPredicted RBP13.08□□□□□ -0.32
SYNE2-219ENST00000555323 TBC1D30Q9Y2I9 924 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 SLC27A6Q9Y2P4 619 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 HYOU1Q9Y4L1 999 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 PCDHA3Q9Y5H8 950 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 PIAS3Q9Y6X2 628 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 A0A1B0GVM2 712 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 TYW5A2RUC4 315 aaKnown RBP13.07□□□□□ -0.32
SYNE2-219ENST00000555323 KRBA1A5PL33 1030 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 GOLGA6L9A6NEM1 432 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 TCAF2A6NFQ2 919 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.07□□□□□ -0.32
SYNE2-219ENST00000555323 ZNF487B1APH4 448 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 PI4K2BG5E9Z4 385 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 MAN2B1O00754 1011 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 SPOPO43791 374 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 TULP3O75386 442 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 LUC7L3O95232 432 aaKnown RBP13.07□□□□□ -0.32
SYNE2-219ENST00000555323 ALADP13716 330 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 RHOQP17081 205 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 CTNNA2P26232 953 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 GGCXP38435 758 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 SSR1P43307 286 aaKnown RBP13.07□□□□□ -0.32
SYNE2-219ENST00000555323 PEX5P50542 639 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 GALK1P51570 392 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 IRAK1P51617 712 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 SIGLEC14Q08ET2 396 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 SMTNL2Q2TAL5 461 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 PREPLQ4J6C6 727 aaPredicted RBP13.07□□□□□ -0.32
SYNE2-219ENST00000555323 ALFQ53S48 1182 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 NLRP14Q86W24 1093 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 C12orf40Q86WS4 652 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 SUGP1Q8IWZ8 645 aaKnown RBP13.07□□□□□ -0.32
SYNE2-219ENST00000555323 CFAP52Q8N1V2 620 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 PHTF2Q8N3S3 785 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 TRIM58Q8NG06 486 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 TTC8Q8TAM2 541 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 HSPH1Q92598 858 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 EXOC4Q96A65 974 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 TBC1D31Q96DN5 1066 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 SHDQ96IW2 340 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 KCTD15Q96SI1 283 aaPredicted RBP13.07□□□□□ -0.32
SYNE2-219ENST00000555323 PCDH18Q9HCL0 1135 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 ARHGEF3Q9NR81 526 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 TMEM248Q9NWD8 314 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 DDX56Q9NY93 547 aaKnown RBP13.07□□□□□ -0.32
SYNE2-219ENST00000555323 DONSONQ9NYP3 566 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 CWC15Q9P013 229 aaKnown RBP13.07□□□□□ -0.32
SYNE2-219ENST00000555323 AMFRQ9UKV5 643 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 CLEC4EQ9ULY5 219 aa13.07□□□□□ -0.32
SYNE2-219ENST00000555323 COL4A2P08572 1712 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 CCDC66A2RUB6 948 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 CREB3O43889 395 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 CNTN5O94779 1100 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 KDELR1P24390 212 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 EPHB2P29323 1055 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 CTNNA1P35221 906 aaKnown RBP13.06□□□□□ -0.32
SYNE2-219ENST00000555323 SLC6A11P48066 632 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 SOX9P48436 509 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 PLK1P53350 603 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 OXCT1P55809 520 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 TAZQ16635 292 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 TMEM196Q5HYL7 178 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 TXNDC11Q6PKC3 985 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 RFX8Q6ZV50 586 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 PEX26Q7Z412 305 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 SETD3Q86TU7 594 aaPredicted RBP13.06□□□□□ -0.32
SYNE2-219ENST00000555323 MAP7D3Q8IWC1 876 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 KATNAL2Q8IYT4 538 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 ZNF687Q8N1G0 1237 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.06□□□□□ -0.32
SYNE2-219ENST00000555323 NAT16Q8N8M0 369 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 KCTD6Q8NC69 237 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 FAM3CQ92520 227 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 RAPGEF5Q92565 580 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 FAF2Q96CS3 445 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 HES6Q96HZ4 224 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 PNKPQ96T60 521 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 NELL2Q99435 816 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 P2RY13Q9BPV8 354 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 CATSPERBQ9H7T0 1116 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 FBRSL1Q9HCM7 1045 aaKnown RBP13.06□□□□□ -0.32
SYNE2-219ENST00000555323 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.06□□□□□ -0.32
SYNE2-219ENST00000555323 TRMT1Q9NXH9 659 aaKnown RBP13.06□□□□□ -0.32
SYNE2-219ENST00000555323 MPP6Q9NZW5 540 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 STIM2Q9P246 746 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 DEC1Q9P2X7 70 aa13.06□□□□□ -0.32
SYNE2-219ENST00000555323 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.06□□□□□ -0.32
SYNE2-219ENST00000555323 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.05□□□□□ -0.32
SYNE2-219ENST00000555323 C3orf70A6NLC5 250 aaPredicted RBP13.05□□□□□ -0.32
SYNE2-219ENST00000555323 USP27XA6NNY8 438 aa13.05□□□□□ -0.32
SYNE2-219ENST00000555323 MIF4GDA9UHW6 222 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms