RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 TARDBPQ13148 414 aaKnown RBP eCLIP13.62□□□□□ -0.23
XRCC3-212ENST00000555231 CUL2Q13617 745 aa13.62□□□□□ -0.23
XRCC3-212ENST00000555231 KCNJ12Q14500 433 aa13.62□□□□□ -0.23
XRCC3-212ENST00000555231 CST6Q15828 149 aa13.62□□□□□ -0.23
XRCC3-212ENST00000555231 CBWD6Q4V339 395 aa13.62□□□□□ -0.23
XRCC3-212ENST00000555231 ZCWPW2Q504Y3 356 aa13.62□□□□□ -0.23
XRCC3-212ENST00000555231 CBWD3Q5JTY5 395 aa13.62□□□□□ -0.23
XRCC3-212ENST00000555231 CBWD5Q5RIA9 395 aa13.62□□□□□ -0.23
XRCC3-212ENST00000555231 C6orf118Q5T5N4 469 aa13.62□□□□□ -0.23
XRCC3-212ENST00000555231 TCERG1LQ5VWI1 586 aa13.62□□□□□ -0.23
XRCC3-212ENST00000555231 ATL3Q6DD88 541 aa13.62□□□□□ -0.23
XRCC3-212ENST00000555231 NADSYN1Q6IA69 706 aa13.62□□□□□ -0.23
XRCC3-212ENST00000555231 MMS22LQ6ZRQ5 1243 aa13.62□□□□□ -0.23
XRCC3-212ENST00000555231 USP30Q70CQ3 517 aa13.62□□□□□ -0.23
XRCC3-212ENST00000555231 MMAAQ8IVH4 418 aaKnown RBP13.62□□□□□ -0.23
XRCC3-212ENST00000555231 CARNMT1Q8N4J0 409 aa13.62□□□□□ -0.23
XRCC3-212ENST00000555231 SAP25Q8TEE9 199 aa13.62□□□□□ -0.23
XRCC3-212ENST00000555231 TTC17Q96AE7 1141 aa13.62□□□□□ -0.23
XRCC3-212ENST00000555231 NXPE2Q96DL1 559 aa13.62□□□□□ -0.23
XRCC3-212ENST00000555231 FAXDC2Q96IV6 333 aa13.62□□□□□ -0.23
XRCC3-212ENST00000555231 LMLNQ96KR4 655 aa13.62□□□□□ -0.23
XRCC3-212ENST00000555231 MRGPRX3Q96LB0 322 aa13.62□□□□□ -0.23
XRCC3-212ENST00000555231 PRICKLE1Q96MT3 831 aaPredicted RBP13.62□□□□□ -0.23
XRCC3-212ENST00000555231 UBL7Q96S82 380 aaPredicted RBP13.62□□□□□ -0.23
XRCC3-212ENST00000555231 PCDHGA1Q9Y5H4 931 aa13.62□□□□□ -0.23
XRCC3-212ENST00000555231 RAI2Q9Y5P3 530 aa13.62□□□□□ -0.23
XRCC3-212ENST00000555231 AK5Q9Y6K8 562 aa13.62□□□□□ -0.23
XRCC3-212ENST00000555231 A0A1W2PR77 199 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 LRRC72A6NJI9 287 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 TTC34A8MYJ7 566 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 O00370 1275 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 RNASEH1O60930 286 aaKnown RBP13.61□□□□□ -0.23
XRCC3-212ENST00000555231 GABBR2O75899 941 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 IGLV3-27P01718 113 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 VDRP11473 427 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 CD38P28907 300 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 SLC8A1P32418 973 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 HNF1BP35680 557 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 EIF2S3P41091 472 aaKnown RBP13.61□□□□□ -0.23
XRCC3-212ENST00000555231 SYKP43405 635 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 PSMD8P48556 350 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 SLC11A2P49281 568 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 ACADVLP49748 655 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 NUMBP49757 651 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 NDUFA8P51970 172 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 TBX4P57082 545 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 RPS24P62847 133 aaKnown RBP13.61□□□□□ -0.23
XRCC3-212ENST00000555231 BNIP3Q12983 259 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 HNRNPA1L2Q32P51 320 aaKnown RBP13.61□□□□□ -0.23
XRCC3-212ENST00000555231 DCAF17Q5H9S7 520 aaPredicted RBP13.61□□□□□ -0.23
XRCC3-212ENST00000555231 HES3Q5TGS1 186 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 MSANTD2Q6P1R3 559 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 SMYD4Q8IYR2 804 aaPredicted RBP13.61□□□□□ -0.23
XRCC3-212ENST00000555231 CFAP52Q8N1V2 620 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 OR2T34Q8NGX1 318 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 FIBINQ8TAL6 211 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 CLEC4CQ8WTT0 213 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 KCTD13Q8WZ19 329 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 SLC39A7Q92504 469 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 SKA1Q96BD8 255 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 OMDQ99983 421 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 CNGB3Q9NQW8 809 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 SCML1Q9UN30 329 aa13.61□□□□□ -0.23
XRCC3-212ENST00000555231 STX10O60499 249 aa13.6□□□□□ -0.23
XRCC3-212ENST00000555231 C1QL1O75973 258 aa13.6□□□□□ -0.23
XRCC3-212ENST00000555231 ASLP04424 464 aa13.6□□□□□ -0.23
XRCC3-212ENST00000555231 HSP90AA1P07900 732 aaKnown RBP13.6□□□□□ -0.23
XRCC3-212ENST00000555231 SETSIPP0DME0 302 aa13.6□□□□□ -0.23
XRCC3-212ENST00000555231 EPB41P11171 864 aaKnown RBP13.6□□□□□ -0.23
XRCC3-212ENST00000555231 EPHA8P29322 1005 aaPredicted RBP13.6□□□□□ -0.23
XRCC3-212ENST00000555231 MCCD1P59942 119 aaPredicted RBP13.6□□□□□ -0.23
XRCC3-212ENST00000555231 C19orf57Q0VDD7 668 aa13.6□□□□□ -0.23
XRCC3-212ENST00000555231 PKDCCQ504Y2 493 aa13.6□□□□□ -0.23
XRCC3-212ENST00000555231 FSCBQ5H9T9 825 aa13.6□□□□□ -0.23
XRCC3-212ENST00000555231 MPP7Q5T2T1 576 aa13.6□□□□□ -0.23
XRCC3-212ENST00000555231 C9orf64Q5T6V5 341 aa13.6□□□□□ -0.23
XRCC3-212ENST00000555231 NUGGCQ68CJ6 796 aa13.6□□□□□ -0.23
XRCC3-212ENST00000555231 LRRC69Q6ZNQ3 347 aa13.6□□□□□ -0.23
XRCC3-212ENST00000555231 UNC45BQ8IWX7 931 aa13.6□□□□□ -0.23
XRCC3-212ENST00000555231 AADATQ8N5Z0 425 aa13.6□□□□□ -0.23
XRCC3-212ENST00000555231 HJURPQ8NCD3 748 aaPredicted RBP13.6□□□□□ -0.23
XRCC3-212ENST00000555231 TFAP2BQ92481 460 aa13.6□□□□□ -0.23
XRCC3-212ENST00000555231 NUCKS1Q9H1E3 243 aaKnown RBP13.6□□□□□ -0.23
XRCC3-212ENST00000555231 PRORYQ9H606 182 aa13.6□□□□□ -0.23
XRCC3-212ENST00000555231 GDF3Q9NR23 364 aa13.6□□□□□ -0.23
XRCC3-212ENST00000555231 ERVW-1Q9UQF0 538 aa13.6□□□□□ -0.23
XRCC3-212ENST00000555231 ARID1BQ8NFD5 2236 aaPredicted RBP13.6□□□□□ -0.23
XRCC3-212ENST00000555231 PTPRQQ9UMZ3 2332 aa13.59□□□□□ -0.23
XRCC3-212ENST00000555231 CETN3O15182 167 aa13.59□□□□□ -0.23
XRCC3-212ENST00000555231 IRAK2O43187 625 aa13.59□□□□□ -0.23
XRCC3-212ENST00000555231 MOCS2O96007 188 aaPredicted RBP13.59□□□□□ -0.23
XRCC3-212ENST00000555231 CALCAP01258 141 aa13.59□□□□□ -0.23
XRCC3-212ENST00000555231 LTFP02788 710 aa13.59□□□□□ -0.23
XRCC3-212ENST00000555231 PPP2CBP62714 309 aa13.59□□□□□ -0.23
XRCC3-212ENST00000555231 PPP2CAP67775 309 aa13.59□□□□□ -0.23
XRCC3-212ENST00000555231 SFSWAPQ12872 951 aaKnown RBP13.59□□□□□ -0.23
XRCC3-212ENST00000555231 CDH18Q13634 790 aa13.59□□□□□ -0.23
XRCC3-212ENST00000555231 EDRF1Q3B7T1 1238 aa13.59□□□□□ -0.23
XRCC3-212ENST00000555231 PITRM1Q5JRX3 1037 aa13.59□□□□□ -0.23
XRCC3-212ENST00000555231 PMF1Q6P1K2 205 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms