RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 K7ELQ4 463 aaPredicted RBP9.43□□□□□ -0.9
SYNE2-209ENST00000553308 YKT6O15498 198 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 BRINP1O60477 761 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 RNASEH1O60930 286 aaKnown RBP9.43□□□□□ -0.9
SYNE2-209ENST00000553308 GABBR2O75899 941 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 IGLV3-27P01718 113 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 PRR29P0C7W0 189 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 CDK4P11802 303 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 CTSOP43234 321 aaPredicted RBP9.43□□□□□ -0.9
SYNE2-209ENST00000553308 PSMD8P48556 350 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 MXI1P50539 228 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 ADPRHP54922 357 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 NXPH1P58417 271 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 DAOAP59103 153 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 ST8SIA6P61647 398 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 PPP2CBP62714 309 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 RPS24P62847 133 aaKnown RBP9.43□□□□□ -0.9
SYNE2-209ENST00000553308 PPP2CAP67775 309 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 CCDC173Q0VFZ6 552 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 BST2Q10589 180 aaKnown RBP9.43□□□□□ -0.9
SYNE2-209ENST00000553308 BNIP3Q12983 259 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 MPP7Q5T2T1 576 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 C9orf64Q5T6V5 341 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 SFMBT2Q5VUG0 894 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 NADSYN1Q6IA69 706 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 MSANTD2Q6P1R3 559 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 PCSK4Q6UW60 755 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 MMS22LQ6ZRQ5 1243 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 KANSL1Q7Z3B3 1105 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 SIX6OS1Q8N1H7 587 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 TTC39CQ8N584 583 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 AADATQ8N5Z0 425 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 FBXL13Q8NEE6 735 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 OR2T34Q8NGX1 318 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 FIBINQ8TAL6 211 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 UBA3Q8TBC4 463 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 BAP1Q92560 729 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 TTC17Q96AE7 1141 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 SKA1Q96BD8 255 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 EEF2KMTQ96G04 330 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 SERAC1Q96JX3 654 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 OMDQ99983 421 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 ABCC13Q9NSE7 274 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 RAB20Q9NX57 234 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 ADAMTS1Q9UHI8 967 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 FZD4Q9ULV1 537 aa9.43□□□□□ -0.9
SYNE2-209ENST00000553308 TTC34A8MYJ7 566 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 PIK3R2O00459 728 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 ACSL4O60488 711 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 F13A1P00488 732 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 ASLP04424 464 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 LCP1P13796 627 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 CD19P15391 556 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 PFKFB1P16118 471 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 SLC8A1P32418 973 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 GTF2H1P32780 548 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 PSMC2P35998 433 aaKnown RBP9.42□□□□□ -0.9
SYNE2-209ENST00000553308 SLC11A2P49281 568 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 ARRB1P49407 418 aaPredicted RBP9.42□□□□□ -0.9
SYNE2-209ENST00000553308 CCR5P51681 352 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 TLE3Q04726 772 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 ENPEPQ07075 957 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 ZCWPW2Q504Y3 356 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 SGO2Q562F6 1265 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 FSCBQ5H9T9 825 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 PITRM1Q5JRX3 1037 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 NUGGCQ68CJ6 796 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 GPR155Q7Z3F1 870 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 ZNF605Q86T29 641 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 ERICH1Q86X53 443 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 SPATS2Q86XZ4 545 aaKnown RBP9.42□□□□□ -0.9
SYNE2-209ENST00000553308 SPACA3Q8IXA5 215 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 STK40Q8N2I9 435 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 CARNMT1Q8N4J0 409 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 HJURPQ8NCD3 748 aaPredicted RBP9.42□□□□□ -0.9
SYNE2-209ENST00000553308 LSM14AQ8ND56 463 aaKnown RBP9.42□□□□□ -0.9
SYNE2-209ENST00000553308 OR14C36Q8NHC7 312 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 KCTD13Q8WZ19 329 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 FAXDC2Q96IV6 333 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 FAM129BQ96TA1 746 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 CNGB3Q9NQW8 809 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 HESX1Q9UBX0 185 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 ERVW-1Q9UQF0 538 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 SETXQ7Z333 2677 aaKnown RBP9.42□□□□□ -0.9
SYNE2-209ENST00000553308 PTPRQQ9UMZ3 2332 aa9.42□□□□□ -0.9
SYNE2-209ENST00000553308 ITIH6Q6UXX5 1313 aa9.41□□□□□ -0.9
SYNE2-209ENST00000553308 EDDM13A0A1B0GTR0 161 aa9.41□□□□□ -0.9
SYNE2-209ENST00000553308 TEX51A0A1B0GUA7 166 aa9.41□□□□□ -0.9
SYNE2-209ENST00000553308 A0A1B0GVL5 298 aa9.41□□□□□ -0.9
SYNE2-209ENST00000553308 TLR4O00206 839 aa9.41□□□□□ -0.9
SYNE2-209ENST00000553308 O00370 1275 aa9.41□□□□□ -0.9
SYNE2-209ENST00000553308 IRAK2O43187 625 aa9.41□□□□□ -0.9
SYNE2-209ENST00000553308 SDC3O75056 442 aa9.41□□□□□ -0.9
SYNE2-209ENST00000553308 RHOBTB3O94955 611 aa9.41□□□□□ -0.9
SYNE2-209ENST00000553308 SETSIPP0DME0 302 aa9.41□□□□□ -0.9
SYNE2-209ENST00000553308 ZSCAN22P10073 491 aaPredicted RBP9.41□□□□□ -0.9
SYNE2-209ENST00000553308 CKMT2P17540 419 aa9.41□□□□□ -0.9
SYNE2-209ENST00000553308 GLDCP23378 1020 aa9.41□□□□□ -0.9
SYNE2-209ENST00000553308 RPL13P26373 211 aaKnown RBP9.41□□□□□ -0.9
SYNE2-209ENST00000553308 RXRGP48443 463 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms