RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 KDM1BQ8NB78 822 aa14.74□□□□□ -0.05
CHMP1A-210ENST00000551981 HJURPQ8NCD3 748 aaPredicted RBP14.74□□□□□ -0.05
CHMP1A-210ENST00000551981 OR2T34Q8NGX1 318 aa14.74□□□□□ -0.05
CHMP1A-210ENST00000551981 KCTD13Q8WZ19 329 aa14.74□□□□□ -0.05
CHMP1A-210ENST00000551981 TTC17Q96AE7 1141 aa14.74□□□□□ -0.05
CHMP1A-210ENST00000551981 DDX50Q9BQ39 737 aaKnown RBP14.74□□□□□ -0.05
CHMP1A-210ENST00000551981 FZD4Q9ULV1 537 aa14.74□□□□□ -0.05
CHMP1A-210ENST00000551981 TPX2Q9ULW0 747 aaKnown RBP14.74□□□□□ -0.05
CHMP1A-210ENST00000551981 AK5Q9Y6K8 562 aa14.74□□□□□ -0.05
CHMP1A-210ENST00000551981 CFAP46Q8IYW2 2715 aa14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 A0A1W2PP55 124 aa14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 MID1O15344 667 aa14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 SIN3BO75182 1162 aa14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 EPB41P11171 864 aaKnown RBP14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 LCP1P13796 627 aa14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 CSKP41240 450 aa14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 CCR5P51681 352 aa14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 SEMG2Q02383 582 aa14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 DNM1Q05193 864 aaKnown RBP14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 CUL2Q13617 745 aa14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 ARID5BQ14865 1188 aa14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 CST6Q15828 149 aa14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 EDRF1Q3B7T1 1238 aa14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 MSANTD2Q6P1R3 559 aa14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 DHX40Q8IX18 779 aaKnown RBP14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 FIBINQ8TAL6 211 aa14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 UBA3Q8TBC4 463 aa14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 ADAM32Q8TC27 787 aa14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 WFDC5Q8TCV5 224 aa14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 SAP25Q8TEE9 199 aa14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 BAP1Q92560 729 aa14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 AZIN2Q96A70 460 aa14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 MTG2Q9H4K7 406 aa14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 STIM2Q9P246 746 aa14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 ADAMTS1Q9UHI8 967 aa14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 KIAA1257Q9ULG3 409 aa14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 NYNRINQ9P2P1 1898 aaKnown RBP14.73□□□□□ -0.05
CHMP1A-210ENST00000551981 GOLGA6L7A0A1B0GV03 622 aa14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 TARSL2A2RTX5 802 aaKnown RBP14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 CETN3O15182 167 aa14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 ATXN7O15265 892 aaPredicted RBP14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 ACSL4O60488 711 aa14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 MOCS3O95396 460 aa14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 IGLV3-27P01718 113 aa14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 VDRP11473 427 aa14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 ITPKBP27987 946 aa14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 EPHA8P29322 1005 aaPredicted RBP14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 EIF2S3P41091 472 aaKnown RBP14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 SYKP43405 635 aa14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 TBX4P57082 545 aa14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 DAOAP59103 153 aa14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 DNAJC3Q13217 504 aa14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 CDH18Q13634 790 aa14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 FAM133BQ5BKY9 247 aaKnown RBP14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 PRAMEF14Q5SWL7 426 aa14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 MMAAQ8IVH4 418 aaKnown RBP14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 OXR1Q8N573 874 aa14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 EID2Q8N6I1 236 aa14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 IRGQQ8WZA9 623 aa14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 SLC39A7Q92504 469 aa14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 NRSN2Q9GZP1 204 aa14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 NEUROG2Q9H2A3 272 aa14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 SERGEFQ9UGK8 458 aa14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 HPSEQ9Y251 543 aa14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 CEP83Q9Y592 693 aa14.72□□□□□ -0.05
CHMP1A-210ENST00000551981 PTPRQQ9UMZ3 2332 aa14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 MYLKQ15746 1914 aa14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 EDDM13A0A1B0GTR0 161 aa14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 CBX4O00257 560 aa14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 O00370 1275 aa14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 ADH1BP00325 375 aa14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 WNT1P04628 370 aa14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 SRPRAP08240 638 aaKnown RBP14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 PRR29P0C7W0 189 aa14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 SLC6A4P31645 630 aa14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 SLC8A1P32418 973 aa14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 ACADVLP49748 655 aa14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 DPYDQ12882 1025 aa14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 TARDBPQ13148 414 aaKnown RBP eCLIP14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 ILKQ13418 452 aa14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 SHBQ15464 509 aa14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 ZCWPW2Q504Y3 356 aa14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 DCAF17Q5H9S7 520 aaPredicted RBP14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 C9orf64Q5T6V5 341 aa14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 HES3Q5TGS1 186 aa14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 TCERG1LQ5VWI1 586 aa14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 RNF219Q5W0B1 726 aaPredicted RBP14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 SND1Q7KZF4 910 aaKnown RBP eCLIP14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 CARNMT1Q8N4J0 409 aa14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 LSM14AQ8ND56 463 aaKnown RBP14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 MYO19Q96H55 970 aa14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 SERAC1Q96JX3 654 aa14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 LMLNQ96KR4 655 aa14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 PRORYQ9H606 182 aa14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 EBF2Q9HAK2 575 aa14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 ERVW-1Q9UQF0 538 aa14.71□□□□□ -0.05
CHMP1A-210ENST00000551981 A0A1W2PR77 199 aa14.7□□□□□ -0.06
CHMP1A-210ENST00000551981 TLR4O00206 839 aa14.7□□□□□ -0.06
CHMP1A-210ENST00000551981 LTFP02788 710 aa14.7□□□□□ -0.06
CHMP1A-210ENST00000551981 CENPBP07199 599 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms