RNA–Protein interactions for RNA: ENST00000550755.5

LETMD1-226, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-226ENST00000550755 SOX2P48431 317 aa5.93□□□□□ -1.46
LETMD1-226ENST00000550755 POLGP54098 1239 aaPredicted RBP5.93□□□□□ -1.46
LETMD1-226ENST00000550755 KRTAP10-11P60412 298 aa5.93□□□□□ -1.46
LETMD1-226ENST00000550755 B4GALNT1Q00973 533 aa5.93□□□□□ -1.46
LETMD1-226ENST00000550755 POU5F1Q01860 360 aaKnown RBP5.93□□□□□ -1.46
LETMD1-226ENST00000550755 HNRNPA0Q13151 305 aaKnown RBP5.93□□□□□ -1.46
LETMD1-226ENST00000550755 MTX1Q13505 466 aa5.93□□□□□ -1.46
LETMD1-226ENST00000550755 KCTD2Q14681 263 aa5.93□□□□□ -1.46
LETMD1-226ENST00000550755 AAK1Q2M2I8 961 aa5.93□□□□□ -1.46
LETMD1-226ENST00000550755 ZNF260Q3ZCT1 412 aa5.93□□□□□ -1.46
LETMD1-226ENST00000550755 XRRA1Q6P2D8 792 aa5.93□□□□□ -1.46
LETMD1-226ENST00000550755 SLC39A5Q6ZMH5 540 aa5.93□□□□□ -1.46
LETMD1-226ENST00000550755 MORC1Q86VD1 984 aa5.93□□□□□ -1.46
LETMD1-226ENST00000550755 RHPN2Q8IUC4 686 aa5.93□□□□□ -1.46
LETMD1-226ENST00000550755 ENAHQ8N8S7 591 aaPredicted RBP5.93□□□□□ -1.46
LETMD1-226ENST00000550755 ANKRD42Q8N9B4 389 aa5.93□□□□□ -1.46
LETMD1-226ENST00000550755 GATA5Q9BWX5 397 aaPredicted RBP5.93□□□□□ -1.46
LETMD1-226ENST00000550755 TP63Q9H3D4 680 aaPredicted RBP5.93□□□□□ -1.46
LETMD1-226ENST00000550755 MOV10Q9HCE1 1003 aaKnown RBP5.93□□□□□ -1.46
LETMD1-226ENST00000550755 MLXIPLQ9NP71 852 aa5.93□□□□□ -1.46
LETMD1-226ENST00000550755 LY6G6EA0A0G2JKS1 128 aa5.92□□□□□ -1.46
LETMD1-226ENST00000550755 C3orf70A6NLC5 250 aaPredicted RBP5.92□□□□□ -1.46
LETMD1-226ENST00000550755 TCERG1O14776 1098 aaKnown RBP5.92□□□□□ -1.46
LETMD1-226ENST00000550755 ASNA1O43681 348 aa5.92□□□□□ -1.46
LETMD1-226ENST00000550755 TGM2P21980 687 aa5.92□□□□□ -1.46
LETMD1-226ENST00000550755 KLRK1P26718 216 aa5.92□□□□□ -1.46
LETMD1-226ENST00000550755 GRK5P34947 590 aa5.92□□□□□ -1.46
LETMD1-226ENST00000550755 HTR3AP46098 478 aa5.92□□□□□ -1.46
LETMD1-226ENST00000550755 SRSF1Q07955 248 aaKnown RBP eCLIP5.92□□□□□ -1.46
LETMD1-226ENST00000550755 GGT6Q6P531 493 aa5.92□□□□□ -1.46
LETMD1-226ENST00000550755 TMEM88Q6PEY1 159 aa5.92□□□□□ -1.46
LETMD1-226ENST00000550755 SLC44A5Q8NCS7 719 aa5.92□□□□□ -1.46
LETMD1-226ENST00000550755 ZFPM2Q8WW38 1151 aa5.92□□□□□ -1.46
LETMD1-226ENST00000550755 SFXN1Q9H9B4 322 aa5.92□□□□□ -1.46
LETMD1-226ENST00000550755 LUZP4Q9P127 313 aa5.92□□□□□ -1.46
LETMD1-226ENST00000550755 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.92□□□□□ -1.46
LETMD1-226ENST00000550755 TBC1D3DA0A087WVF3 549 aa5.91□□□□□ -1.46
LETMD1-226ENST00000550755 TBC1D3IA0A087WXS9 549 aa5.91□□□□□ -1.46
LETMD1-226ENST00000550755 TBC1D3EA0A087X179 549 aa5.91□□□□□ -1.46
LETMD1-226ENST00000550755 TBC1D3KA0A087X1G2 549 aa5.91□□□□□ -1.46
LETMD1-226ENST00000550755 TBC1D3BA6NDS4 549 aa5.91□□□□□ -1.46
LETMD1-226ENST00000550755 TBC1D3FA6NER0 549 aaPredicted RBP5.91□□□□□ -1.46
LETMD1-226ENST00000550755 TBC1D3LB9A6J9 549 aa5.91□□□□□ -1.46
LETMD1-226ENST00000550755 DNPH1O43598 174 aa5.91□□□□□ -1.46
LETMD1-226ENST00000550755 SKAP2O75563 359 aaPredicted RBP5.91□□□□□ -1.46
LETMD1-226ENST00000550755 RPP40O75818 363 aaKnown RBP5.91□□□□□ -1.46
LETMD1-226ENST00000550755 TBC1D3HP0C7X1 549 aa5.91□□□□□ -1.46
LETMD1-226ENST00000550755 CASP2P42575 452 aa5.91□□□□□ -1.46
LETMD1-226ENST00000550755 SLC37A1P57057 533 aa5.91□□□□□ -1.46
LETMD1-226ENST00000550755 TNFAIP2Q03169 654 aa5.91□□□□□ -1.46
LETMD1-226ENST00000550755 TLE3Q04726 772 aa5.91□□□□□ -1.46
LETMD1-226ENST00000550755 SPARCL1Q14515 664 aa5.91□□□□□ -1.46
LETMD1-226ENST00000550755 SLC4A8Q2Y0W8 1093 aa5.91□□□□□ -1.46
LETMD1-226ENST00000550755 MANEAQ5SRI9 462 aa5.91□□□□□ -1.46
LETMD1-226ENST00000550755 ATPAF1Q5TC12 328 aaPredicted RBP5.91□□□□□ -1.46
LETMD1-226ENST00000550755 TBC1D3GQ6DHY5 549 aa5.91□□□□□ -1.46
LETMD1-226ENST00000550755 AWAT2Q6E213 333 aa5.91□□□□□ -1.46
LETMD1-226ENST00000550755 TBC1D3CQ6IPX1 549 aa5.91□□□□□ -1.46
LETMD1-226ENST00000550755 ZNF354CQ86Y25 554 aa5.91□□□□□ -1.46
LETMD1-226ENST00000550755 TBC1D3Q8IZP1 549 aaPredicted RBP5.91□□□□□ -1.46
LETMD1-226ENST00000550755 FAM71BQ8TC56 605 aa5.91□□□□□ -1.46
LETMD1-226ENST00000550755 GTF2A1LQ9UNN4 478 aa5.91□□□□□ -1.46
LETMD1-226ENST00000550755 LOC105369274A0A096LPK9 316 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 LOC102723532A0A0G2JNH3 316 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 AQP12BA6NM10 295 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 H3BNX3 289 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 ANP32CO43423 234 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 CNTN5O94779 1100 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 LARGE1O95461 756 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 RFPL3SP0C7P2 107 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 HALP42357 657 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 POLE2P56282 527 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 TAS2R50P59544 299 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 RNASELQ05823 741 aaKnown RBP5.9□□□□□ -1.46
LETMD1-226ENST00000550755 SIM2Q14190 667 aaPredicted RBP5.9□□□□□ -1.46
LETMD1-226ENST00000550755 DLGAP5Q15398 846 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 ZNF474Q6S9Z5 364 aaPredicted RBP5.9□□□□□ -1.46
LETMD1-226ENST00000550755 LRIG3Q6UXM1 1119 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 COLCA1Q6ZS62 124 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 TOGARAM2Q6ZUX3 1019 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 IRF2BP2Q7Z5L9 587 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 PIP4P1Q86T03 277 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 OR4N4Q8N0Y3 316 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 MMP21Q8N119 569 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 ARL14EPQ8N8R7 260 aaPredicted RBP5.9□□□□□ -1.46
LETMD1-226ENST00000550755 CCDC89Q8N998 374 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 ZNF548Q8NEK5 533 aaPredicted RBP5.9□□□□□ -1.46
LETMD1-226ENST00000550755 NSMCE1Q8WV22 266 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 RSC1A1Q92681 617 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 MCRS1Q96EZ8 462 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 PKNOX2Q96KN3 472 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 HERPUD2Q9BSE4 406 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 OBP2BQ9NPH6 170 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 AGO2Q9UKV8 859 aaKnown RBP5.9□□□□□ -1.46
LETMD1-226ENST00000550755 RAB21Q9UL25 225 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 SLC12A4Q9UP95 1085 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 SQORQ9Y6N5 450 aa5.9□□□□□ -1.46
LETMD1-226ENST00000550755 A0A087WV62 115 aa5.89□□□□□ -1.47
LETMD1-226ENST00000550755 DYTNA2CJ06 578 aa5.89□□□□□ -1.47
LETMD1-226ENST00000550755 KIF28PB7ZC32 967 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms