RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 CTNNA2P26232 953 aa21.74■■□□□ 1.07
CACNB3-210ENST00000548874 CTNNA1P35221 906 aaKnown RBP21.74■■□□□ 1.07
CACNB3-210ENST00000548874 OPRD1P41143 372 aa21.74■■□□□ 1.07
CACNB3-210ENST00000548874 EIF2DP41214 584 aaKnown RBP21.74■■□□□ 1.07
CACNB3-210ENST00000548874 ZXDAP98168 799 aa21.74■■□□□ 1.07
CACNB3-210ENST00000548874 ALFQ53S48 1182 aa21.74■■□□□ 1.07
CACNB3-210ENST00000548874 CHST9Q7L1S5 443 aa21.74■■□□□ 1.07
CACNB3-210ENST00000548874 RALGPS2Q86X27 583 aaPredicted RBP21.74■■□□□ 1.07
CACNB3-210ENST00000548874 TSC1Q92574 1164 aa21.74■■□□□ 1.07
CACNB3-210ENST00000548874 ZYG11BQ9C0D3 744 aa21.74■■□□□ 1.07
CACNB3-210ENST00000548874 ZNF212Q9UDV6 495 aa21.74■■□□□ 1.07
CACNB3-210ENST00000548874 CLEC4EQ9ULY5 219 aa21.74■■□□□ 1.07
CACNB3-210ENST00000548874 CREB3O43889 395 aa21.73■■□□□ 1.07
CACNB3-210ENST00000548874 CNTN5O94779 1100 aa21.73■■□□□ 1.07
CACNB3-210ENST00000548874 LUC7L3O95232 432 aaKnown RBP21.73■■□□□ 1.07
CACNB3-210ENST00000548874 FTCDO95954 541 aa21.73■■□□□ 1.07
CACNB3-210ENST00000548874 MARCKSL1P49006 195 aa21.73■■□□□ 1.07
CACNB3-210ENST00000548874 HCAR3P49019 387 aa21.73■■□□□ 1.07
CACNB3-210ENST00000548874 CDH4P55283 916 aa21.73■■□□□ 1.07
CACNB3-210ENST00000548874 AMPD2Q01433 879 aa21.73■■□□□ 1.07
CACNB3-210ENST00000548874 MLF2Q15773 248 aaPredicted RBP21.73■■□□□ 1.07
CACNB3-210ENST00000548874 PPP6R3Q5H9R7 873 aaPredicted RBP21.73■■□□□ 1.07
CACNB3-210ENST00000548874 PEX26Q7Z412 305 aa21.73■■□□□ 1.07
CACNB3-210ENST00000548874 CIR1Q86X95 450 aaPredicted RBP21.73■■□□□ 1.07
CACNB3-210ENST00000548874 TRIM58Q8NG06 486 aa21.73■■□□□ 1.07
CACNB3-210ENST00000548874 UBE2Q2Q8WVN8 375 aa21.73■■□□□ 1.07
CACNB3-210ENST00000548874 KRT35Q92764 455 aa21.73■■□□□ 1.07
CACNB3-210ENST00000548874 ALS2CR12Q96Q35 445 aa21.73■■□□□ 1.07
CACNB3-210ENST00000548874 XPO6Q96QU8 1125 aaKnown RBP21.73■■□□□ 1.07
CACNB3-210ENST00000548874 SLC2A11Q9BYW1 496 aa21.73■■□□□ 1.07
CACNB3-210ENST00000548874 RETREG1Q9H6L5 497 aa21.73■■□□□ 1.07
CACNB3-210ENST00000548874 ARHGEF3Q9NR81 526 aa21.73■■□□□ 1.07
CACNB3-210ENST00000548874 DDX56Q9NY93 547 aaKnown RBP21.73■■□□□ 1.07
CACNB3-210ENST00000548874 MPP6Q9NZW5 540 aa21.73■■□□□ 1.07
CACNB3-210ENST00000548874 CWC15Q9P013 229 aaKnown RBP21.73■■□□□ 1.07
CACNB3-210ENST00000548874 STIM2Q9P246 746 aa21.73■■□□□ 1.07
CACNB3-210ENST00000548874 RCOR3Q9P2K3 495 aaPredicted RBP21.73■■□□□ 1.07
CACNB3-210ENST00000548874 AMFRQ9UKV5 643 aa21.73■■□□□ 1.07
CACNB3-210ENST00000548874 PCDHA3Q9Y5H8 950 aa21.73■■□□□ 1.07
CACNB3-210ENST00000548874 KIAA1549LQ6ZVL6 1849 aa21.72■■□□□ 1.07
CACNB3-210ENST00000548874 EEF2KO00418 725 aaKnown RBP21.72■■□□□ 1.07
CACNB3-210ENST00000548874 TULP3O75386 442 aa21.72■■□□□ 1.07
CACNB3-210ENST00000548874 CLDN11O75508 207 aa21.72■■□□□ 1.07
CACNB3-210ENST00000548874 TNNT1P13805 278 aa21.72■■□□□ 1.07
CACNB3-210ENST00000548874 RHOQP17081 205 aa21.72■■□□□ 1.07
CACNB3-210ENST00000548874 GOT1P17174 413 aa21.72■■□□□ 1.07
CACNB3-210ENST00000548874 CDH6P55285 790 aa21.72■■□□□ 1.07
CACNB3-210ENST00000548874 TPI1P60174 286 aa21.72■■□□□ 1.07
CACNB3-210ENST00000548874 PRKCQQ04759 706 aa21.72■■□□□ 1.07
CACNB3-210ENST00000548874 PDK2Q15119 407 aa21.72■■□□□ 1.07
CACNB3-210ENST00000548874 NAIF1Q69YI7 327 aaPredicted RBP21.72■■□□□ 1.07
CACNB3-210ENST00000548874 TXNDC11Q6PKC3 985 aa21.72■■□□□ 1.07
CACNB3-210ENST00000548874 RFX8Q6ZV50 586 aa21.72■■□□□ 1.07
CACNB3-210ENST00000548874 NLRP14Q86W24 1093 aa21.72■■□□□ 1.07
CACNB3-210ENST00000548874 KATNAL2Q8IYT4 538 aa21.72■■□□□ 1.07
CACNB3-210ENST00000548874 PHTF2Q8N3S3 785 aa21.72■■□□□ 1.07
CACNB3-210ENST00000548874 NAT16Q8N8M0 369 aa21.72■■□□□ 1.07
CACNB3-210ENST00000548874 WFDC5Q8TCV5 224 aa21.72■■□□□ 1.07
CACNB3-210ENST00000548874 RAPGEF5Q92565 580 aa21.72■■□□□ 1.07
CACNB3-210ENST00000548874 KLHL11Q9NVR0 708 aa21.72■■□□□ 1.07
CACNB3-210ENST00000548874 DOCK4Q8N1I0 1966 aa21.72■■□□□ 1.07
CACNB3-210ENST00000548874 CCDC66A2RUB6 948 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 KRBA1A5PL33 1030 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 C3orf70A6NLC5 250 aaPredicted RBP21.71■■□□□ 1.07
CACNB3-210ENST00000548874 WASH4PA8MWX3 477 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 MIF4GDA9UHW6 222 aaKnown RBP21.71■■□□□ 1.07
CACNB3-210ENST00000548874 H3BRJ5 948 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 DCXO43602 365 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 CD48P09326 243 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 CISD3P0C7P0 127 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 KDELR1P24390 212 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 IL4RP24394 825 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 EPHB2P29323 1055 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 ARL4AP40617 200 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 SLC6A11P48066 632 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 PEX5P50542 639 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 DPYSQ14117 519 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 DPYSL3Q14195 570 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 KRT81Q14533 505 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 RWDD4Q6NW29 188 aaKnown RBP21.71■■□□□ 1.07
CACNB3-210ENST00000548874 C1orf228Q6PIY5 440 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 VSIG1Q86XK7 387 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 MFN1Q8IWA4 741 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 ZNF557Q8N988 423 aaPredicted RBP21.71■■□□□ 1.07
CACNB3-210ENST00000548874 KCTD6Q8NC69 237 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 FIBINQ8TAL6 211 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 HES6Q96HZ4 224 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 LMLNQ96KR4 655 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 CSPG4P5Q96PW8 444 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 ZNF670Q9BS34 389 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 DNAJC17Q9NVM6 304 aaKnown RBP21.71■■□□□ 1.07
CACNB3-210ENST00000548874 TMEM248Q9NWD8 314 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 CA14Q9ULX7 337 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 TBC1D30Q9Y2I9 924 aa21.71■■□□□ 1.07
CACNB3-210ENST00000548874 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.71■■□□□ 1.07
CACNB3-210ENST00000548874 NCOR1O75376 2440 aa21.7■■□□□ 1.06
CACNB3-210ENST00000548874 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.7■■□□□ 1.06
CACNB3-210ENST00000548874 ZNF487B1APH4 448 aa21.7■■□□□ 1.06
CACNB3-210ENST00000548874 FGF10O15520 208 aaPredicted RBP21.7■■□□□ 1.06
CACNB3-210ENST00000548874 KRT1P04264 644 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms