RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 SLC8A2Q9UPR5 921 aa17.36■□□□□ 0.37
LTBR-215ENST00000546296 MYOFQ9NZM1 2061 aa17.36■□□□□ 0.37
LTBR-215ENST00000546296 A0A1B0GVM2 712 aa17.35■□□□□ 0.37
LTBR-215ENST00000546296 ANTXRLA6NF34 631 aa17.35■□□□□ 0.37
LTBR-215ENST00000546296 TCAF2A6NFQ2 919 aa17.35■□□□□ 0.37
LTBR-215ENST00000546296 CHURC1-FNTBB4DL54 471 aa17.35■□□□□ 0.37
LTBR-215ENST00000546296 E9PAM4 449 aa17.35■□□□□ 0.37
LTBR-215ENST00000546296 MYO1FO00160 1098 aa17.35■□□□□ 0.37
LTBR-215ENST00000546296 CLDN11O75508 207 aa17.35■□□□□ 0.37
LTBR-215ENST00000546296 KLF8O95600 359 aaPredicted RBP17.35■□□□□ 0.37
LTBR-215ENST00000546296 PABPC1P11940 636 aaKnown RBP17.35■□□□□ 0.37
LTBR-215ENST00000546296 HLA-FP30511 346 aa17.35■□□□□ 0.37
LTBR-215ENST00000546296 MAGEA1P43355 309 aa17.35■□□□□ 0.37
LTBR-215ENST00000546296 SATB1Q01826 763 aa17.35■□□□□ 0.37
LTBR-215ENST00000546296 PIGHQ14442 188 aaPredicted RBP17.35■□□□□ 0.37
LTBR-215ENST00000546296 E2F5Q15329 346 aa17.35■□□□□ 0.37
LTBR-215ENST00000546296 SDE2Q6IQ49 451 aa17.35■□□□□ 0.37
LTBR-215ENST00000546296 MAMSTRQ6ZN01 415 aa17.35■□□□□ 0.37
LTBR-215ENST00000546296 CHST9Q7L1S5 443 aa17.35■□□□□ 0.37
LTBR-215ENST00000546296 TRMT11Q7Z4G4 463 aaKnown RBP17.35■□□□□ 0.37
LTBR-215ENST00000546296 CCAR2Q8N163 923 aaKnown RBP17.35■□□□□ 0.37
LTBR-215ENST00000546296 ALLCQ8N6M5 410 aa17.35■□□□□ 0.37
LTBR-215ENST00000546296 ZNF513Q8N8E2 541 aaPredicted RBP17.35■□□□□ 0.37
LTBR-215ENST00000546296 ZNF564Q8TBZ8 553 aaPredicted RBP17.35■□□□□ 0.37
LTBR-215ENST00000546296 NTAN1Q96AB6 310 aa17.35■□□□□ 0.37
LTBR-215ENST00000546296 KCNH6Q9H252 994 aa17.35■□□□□ 0.37
LTBR-215ENST00000546296 GRPEL1Q9HAV7 217 aa17.35■□□□□ 0.37
LTBR-215ENST00000546296 ELOVL2Q9NXB9 296 aa17.35■□□□□ 0.37
LTBR-215ENST00000546296 KIAA1522Q9P206 1035 aaPredicted RBP17.35■□□□□ 0.37
LTBR-215ENST00000546296 UVRAGQ9P2Y5 699 aa17.35■□□□□ 0.37
LTBR-215ENST00000546296 STARD13Q9Y3M8 1113 aa17.35■□□□□ 0.37
LTBR-215ENST00000546296 DRGXA6NNA5 263 aa17.34■□□□□ 0.37
LTBR-215ENST00000546296 PRPSAP2O60256 369 aa17.34■□□□□ 0.37
LTBR-215ENST00000546296 IPO7O95373 1038 aaKnown RBP17.34■□□□□ 0.37
LTBR-215ENST00000546296 MOCS3O95396 460 aa17.34■□□□□ 0.37
LTBR-215ENST00000546296 COL9A1P20849 921 aa17.34■□□□□ 0.37
LTBR-215ENST00000546296 CD70P32970 193 aa17.34■□□□□ 0.37
LTBR-215ENST00000546296 SSR1P43307 286 aaKnown RBP17.34■□□□□ 0.37
LTBR-215ENST00000546296 KIR2DL1P43626 348 aaPredicted RBP17.34■□□□□ 0.37
LTBR-215ENST00000546296 AIF1P55008 147 aa17.34■□□□□ 0.37
LTBR-215ENST00000546296 CDH4P55283 916 aa17.34■□□□□ 0.37
LTBR-215ENST00000546296 OXCT1P55809 520 aa17.34■□□□□ 0.37
LTBR-215ENST00000546296 ZNF252P-AS1Q0IIN9 211 aa17.34■□□□□ 0.37
LTBR-215ENST00000546296 LMAN2Q12907 356 aa17.34■□□□□ 0.37
LTBR-215ENST00000546296 ACAP1Q15027 740 aa17.34■□□□□ 0.37
LTBR-215ENST00000546296 FSCBQ5H9T9 825 aa17.34■□□□□ 0.37
LTBR-215ENST00000546296 RNF43Q68DV7 783 aa17.34■□□□□ 0.37
LTBR-215ENST00000546296 RWDD4Q6NW29 188 aaKnown RBP17.34■□□□□ 0.37
LTBR-215ENST00000546296 AHI1Q8N157 1196 aa17.34■□□□□ 0.37
LTBR-215ENST00000546296 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.34■□□□□ 0.37
LTBR-215ENST00000546296 TXNDC5Q8NBS9 432 aaKnown RBP17.34■□□□□ 0.37
LTBR-215ENST00000546296 WFDC5Q8TCV5 224 aa17.34■□□□□ 0.37
LTBR-215ENST00000546296 BTBD6Q96KE9 485 aa17.34■□□□□ 0.37
LTBR-215ENST00000546296 BAG1Q99933 345 aaPredicted RBP17.34■□□□□ 0.37
LTBR-215ENST00000546296 ZDHHC4Q9NPG8 344 aa17.34■□□□□ 0.37
LTBR-215ENST00000546296 LUC7LQ9NQ29 371 aaKnown RBP17.34■□□□□ 0.37
LTBR-215ENST00000546296 FZD10Q9ULW2 581 aa17.34■□□□□ 0.37
LTBR-215ENST00000546296 MIA3Q5JRA6 1907 aa17.33■□□□□ 0.37
LTBR-215ENST00000546296 SOWAHDA6NJG2 315 aa17.33■□□□□ 0.36
LTBR-215ENST00000546296 H0Y858 1186 aa17.33■□□□□ 0.36
LTBR-215ENST00000546296 CNTN5O94779 1100 aa17.33■□□□□ 0.36
LTBR-215ENST00000546296 ATP5BP06576 529 aaKnown RBP17.33■□□□□ 0.36
LTBR-215ENST00000546296 POLR2EP19388 210 aaKnown RBP17.33■□□□□ 0.36
LTBR-215ENST00000546296 MIPP30301 263 aa17.33■□□□□ 0.36
LTBR-215ENST00000546296 WASP42768 502 aa17.33■□□□□ 0.36
LTBR-215ENST00000546296 IRAK1P51617 712 aa17.33■□□□□ 0.36
LTBR-215ENST00000546296 SCAPQ12770 1279 aa17.33■□□□□ 0.36
LTBR-215ENST00000546296 EIF4HQ15056 248 aaKnown RBP17.33■□□□□ 0.36
LTBR-215ENST00000546296 C5orf22Q49AR2 442 aa17.33■□□□□ 0.36
LTBR-215ENST00000546296 HSF5Q4G112 596 aaPredicted RBP17.33■□□□□ 0.36
LTBR-215ENST00000546296 EOGTQ5NDL2 527 aa17.33■□□□□ 0.36
LTBR-215ENST00000546296 EGFLAMQ63HQ2 1017 aa17.33■□□□□ 0.36
LTBR-215ENST00000546296 MBLAC2Q68D91 279 aa17.33■□□□□ 0.36
LTBR-215ENST00000546296 TSSK4Q6SA08 328 aa17.33■□□□□ 0.36
LTBR-215ENST00000546296 SYT13Q7L8C5 426 aa17.33■□□□□ 0.36
LTBR-215ENST00000546296 ZNF683Q8IZ20 524 aa17.33■□□□□ 0.36
LTBR-215ENST00000546296 CHPFQ8IZ52 775 aa17.33■□□□□ 0.36
LTBR-215ENST00000546296 IL17RCQ8NAC3 791 aa17.33■□□□□ 0.36
LTBR-215ENST00000546296 PRSS33Q8NF86 280 aa17.33■□□□□ 0.36
LTBR-215ENST00000546296 SORCS1Q8WY21 1168 aa17.33■□□□□ 0.36
LTBR-215ENST00000546296 PPP1R9BQ96SB3 815 aa17.33■□□□□ 0.36
LTBR-215ENST00000546296 ZYG11BQ9C0D3 744 aa17.33■□□□□ 0.36
LTBR-215ENST00000546296 POLR3BQ9NW08 1133 aaPredicted RBP17.33■□□□□ 0.36
LTBR-215ENST00000546296 C2orf42Q9NWW7 574 aa17.33■□□□□ 0.36
LTBR-215ENST00000546296 MPP6Q9NZW5 540 aa17.33■□□□□ 0.36
LTBR-215ENST00000546296 FBXO4Q9UKT5 387 aa17.33■□□□□ 0.36
LTBR-215ENST00000546296 INTUQ9ULD6 942 aa17.33■□□□□ 0.36
LTBR-215ENST00000546296 PLA2G4CQ9UP65 541 aa17.33■□□□□ 0.36
LTBR-215ENST00000546296 EPN1Q9Y6I3 576 aaPredicted RBP17.33■□□□□ 0.36
LTBR-215ENST00000546296 EIF3CLB5ME19 914 aaKnown RBP17.32■□□□□ 0.36
LTBR-215ENST00000546296 NTSR1P30989 418 aa17.32■□□□□ 0.36
LTBR-215ENST00000546296 PCK1P35558 622 aa17.32■□□□□ 0.36
LTBR-215ENST00000546296 PTPN5P54829 565 aa17.32■□□□□ 0.36
LTBR-215ENST00000546296 GSDMDP57764 484 aa17.32■□□□□ 0.36
LTBR-215ENST00000546296 NRG1Q02297 640 aaPredicted RBP17.32■□□□□ 0.36
LTBR-215ENST00000546296 SLC12A1Q13621 1099 aa17.32■□□□□ 0.36
LTBR-215ENST00000546296 DMC1Q14565 340 aa17.32■□□□□ 0.36
LTBR-215ENST00000546296 ALFQ53S48 1182 aa17.32■□□□□ 0.36
LTBR-215ENST00000546296 ERMARDQ5T6L9 678 aa17.32■□□□□ 0.36
LTBR-215ENST00000546296 TMEM215Q68D42 235 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms