RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 PGAM1P18669 254 aa16.22■□□□□ 0.19
LDLR-204ENST00000545707 CNTFP26441 200 aa16.22■□□□□ 0.19
LDLR-204ENST00000545707 ADIGQ0VDE8 80 aa16.22■□□□□ 0.19
LDLR-204ENST00000545707 GRIK4Q16099 956 aa16.22■□□□□ 0.19
LDLR-204ENST00000545707 C9orf57Q5W0N0 161 aa16.22■□□□□ 0.19
LDLR-204ENST00000545707 ADAM32Q8TC27 787 aa16.22■□□□□ 0.19
LDLR-204ENST00000545707 ATP2A3Q93084 1043 aa16.22■□□□□ 0.19
LDLR-204ENST00000545707 SNX27Q96L92 541 aa16.22■□□□□ 0.19
LDLR-204ENST00000545707 AGAP2Q99490 1192 aa16.22■□□□□ 0.19
LDLR-204ENST00000545707 COPG2Q9UBF2 871 aa16.22■□□□□ 0.19
LDLR-204ENST00000545707 PACSIN3Q9UKS6 424 aa16.22■□□□□ 0.19
LDLR-204ENST00000545707 LTBP3Q9NS15 1303 aa16.22■□□□□ 0.19
LDLR-204ENST00000545707 BPTFQ12830 3046 aa16.22■□□□□ 0.19
LDLR-204ENST00000545707 BEST1O76090 585 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 RALBP11234 206 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 GNAT1P11488 350 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 FDFT1P37268 417 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 BCAT1P54687 386 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 KYAT1Q16773 422 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 SYPL2Q5VXT5 272 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 ARHGAP17Q68EM7 881 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 CATSPER4Q7RTX7 472 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 PID1Q7Z2X4 250 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 ZDHHC17Q8IUH5 632 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.21■□□□□ 0.19
LDLR-204ENST00000545707 SLC26A7Q8TE54 656 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 PPP1R36Q96LQ0 422 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 ECSITQ9BQ95 431 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 TXNDC16Q9P2K2 825 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 DCDC2Q9UHG0 476 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 ASB3Q9Y575 518 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 ZNF487B1APH4 448 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 FAM72CH0Y354 149 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 IGFBP6P24592 240 aaPredicted RBP16.21■□□□□ 0.19
LDLR-204ENST00000545707 IRF9Q00978 393 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 CDK18Q07002 472 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 CDC16Q13042 620 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 ZBTB6Q15916 424 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 TCHHL1Q5QJ38 904 aaPredicted RBP16.21■□□□□ 0.19
LDLR-204ENST00000545707 FAM72AQ5TYM5 149 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 OTUD1Q5VV17 481 aaPredicted RBP16.21■□□□□ 0.19
LDLR-204ENST00000545707 LPCAT4Q643R3 524 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 FAM72DQ6L9T8 149 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 NAPRTQ6XQN6 538 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 CYS1Q717R9 158 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 PIGZQ86VD9 579 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 FAM72BQ86X60 149 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 ERO1BQ86YB8 467 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 DCLK2Q8N568 766 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 BEST2Q8NFU1 509 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 PPP4R1Q8TF05 950 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 RNF139Q8WU17 664 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 OSMRQ99650 979 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 C1orf21Q9H246 121 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 RNF39Q9H2S5 420 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 SNX15Q9NRS6 342 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 CITO14578 2027 aa16.21■□□□□ 0.19
LDLR-204ENST00000545707 CCDC78A2IDD5 438 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 GOLGA8TH3BQL2 631 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 ZNF195O14628 629 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 DCXO43602 365 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 RECQL4O94761 1208 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 AMHP03971 560 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 ACAT1P24752 427 aaKnown RBP16.2■□□□□ 0.18
LDLR-204ENST00000545707 MATKP42679 507 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 COPAP53621 1224 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 IRX1P78414 480 aaPredicted RBP16.2■□□□□ 0.18
LDLR-204ENST00000545707 DSG1Q02413 1049 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 TBCCQ15814 346 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 EFHC1Q5JVL4 640 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 PDPK2PQ6A1A2 396 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 HFE2Q6ZVN8 426 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 NT5DC4Q86YG4 428 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 GPC2Q8N158 579 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 ACVR1CQ8NER5 493 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 NLGN2Q8NFZ4 835 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 ACMSDQ8TDX5 336 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 APOL2Q9BQE5 337 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 MAGEA13PA6NCF6 341 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 E9PBE3 544 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 BUD23O43709 281 aaKnown RBP16.2■□□□□ 0.18
LDLR-204ENST00000545707 KLHL41O60662 606 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 MLNP12872 115 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 IREB2P48200 963 aaKnown RBP16.2■□□□□ 0.18
LDLR-204ENST00000545707 SNX16P57768 344 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 ABCE1P61221 599 aaKnown RBP16.2■□□□□ 0.18
LDLR-204ENST00000545707 FRMD7Q6ZUT3 714 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 CTU1Q7Z7A3 348 aaKnown RBP16.2■□□□□ 0.18
LDLR-204ENST00000545707 UNC93AQ86WB7 457 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 HPS6Q86YV9 775 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 ZNF781Q8N8C0 355 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 RNF169Q8NCN4 708 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 DCPSQ96C86 337 aaKnown RBP16.2■□□□□ 0.18
LDLR-204ENST00000545707 IFT43Q96FT9 208 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 CERS2Q96G23 380 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 TUBGCP5Q96RT8 1024 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 EBF3Q9H4W6 596 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 S100A14Q9HCY8 104 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 GTF2IRD1Q9UHL9 959 aa16.2■□□□□ 0.18
LDLR-204ENST00000545707 ASB14A6NK59 587 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms