RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 SGF29Q96ES7 293 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 L3MBTL3Q96JM7 780 aaPredicted RBP9.21□□□□□ -0.94
NECAP1-207ENST00000544891 TLR10Q9BXR5 811 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 IL22Q9GZX6 179 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 EXOSC4Q9NPD3 245 aaKnown RBP9.21□□□□□ -0.94
NECAP1-207ENST00000544891 OSGEPQ9NPF4 335 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 CYP39A1Q9NYL5 469 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 NAALADL1Q9UQQ1 740 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 UBIAD1Q9Y5Z9 338 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 PTCH2Q9Y6C5 1203 aa9.21□□□□□ -0.94
NECAP1-207ENST00000544891 A0A087X1B8 175 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 A0A088AWK7 358 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 FAM47E-STBD1D6RA91 191 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 FAM86B1E9PN63 330 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 DDX3XO00571 662 aaKnown RBP eCLIP9.2□□□□□ -0.94
NECAP1-207ENST00000544891 AMHP03971 560 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 ABHD2P08910 425 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 FAM86B2P0C5J1 330 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 MSH3P20585 1137 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 ZNF10P21506 573 aaPredicted RBP9.2□□□□□ -0.94
NECAP1-207ENST00000544891 AQP5P55064 265 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 MRPS15P82914 257 aaKnown RBP9.2□□□□□ -0.94
NECAP1-207ENST00000544891 CCDC149Q6ZUS6 474 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 TLK2Q86UE8 772 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 CYP4Z2PQ8N1L4 340 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 TMEM159Q96B96 161 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 FAM120BQ96EK7 910 aaKnown RBP9.2□□□□□ -0.94
NECAP1-207ENST00000544891 FAM118BQ9BPY3 351 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 BDH2Q9BUT1 245 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 SLC25A23Q9BV35 468 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 PACSIN1Q9BY11 444 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 PARVBQ9HBI1 364 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 A1CFQ9NQ94 594 aaKnown RBP9.2□□□□□ -0.94
NECAP1-207ENST00000544891 GGA2Q9UJY4 613 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 CNOT3O75175 753 aaKnown RBP9.2□□□□□ -0.94
NECAP1-207ENST00000544891 TCF3P15923 654 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 SERPINB1P30740 379 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 GUCA1AP43080 201 aaPredicted RBP9.2□□□□□ -0.94
NECAP1-207ENST00000544891 PLOD1Q02809 727 aaPredicted RBP9.2□□□□□ -0.94
NECAP1-207ENST00000544891 FOXD4Q12950 439 aaPredicted RBP9.2□□□□□ -0.94
NECAP1-207ENST00000544891 ACVR2BQ13705 512 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 NCF4Q15080 339 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 BMT2Q1RMZ1 405 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 PPP1R15BQ5SWA1 713 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 SYCP2LQ5T4T6 812 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 CCDC60Q8IWA6 550 aaPredicted RBP9.2□□□□□ -0.94
NECAP1-207ENST00000544891 AADATQ8N5Z0 425 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 PHC3Q8NDX5 983 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 SETD9Q8NE22 299 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 MTMR8Q96EF0 704 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 ATP13A1Q9HD20 1204 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 DDX28Q9NUL7 540 aaKnown RBP9.2□□□□□ -0.94
NECAP1-207ENST00000544891 SNTG2Q9NY99 539 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 ADAM30Q9UKF2 790 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 DERAQ9Y315 318 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 H3BQF6 201 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 ZBTB39O15060 712 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 IMPDH2P12268 514 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 ERVK-9P63128 1117 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 C1DQ13901 141 aaKnown RBP9.2□□□□□ -0.94
NECAP1-207ENST00000544891 SMAD1Q15797 465 aaKnown RBP9.2□□□□□ -0.94
NECAP1-207ENST00000544891 FAM98BQ52LJ0 330 aaKnown RBP9.2□□□□□ -0.94
NECAP1-207ENST00000544891 FAM117BQ6P1L5 589 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 RFX8Q6ZV50 586 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 TMC3Q7Z5M5 1100 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 ILDR1Q86SU0 546 aaPredicted RBP9.2□□□□□ -0.94
NECAP1-207ENST00000544891 FBXO39Q8N4B4 442 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 LRRC52Q8N7C0 313 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 ATL1Q8WXF7 558 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 DLG3Q92796 817 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 C2orf49Q9BVC5 232 aaPredicted RBP9.2□□□□□ -0.94
NECAP1-207ENST00000544891 NLNQ9BYT8 704 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 POLR1EQ9GZS1 481 aaKnown RBP9.2□□□□□ -0.94
NECAP1-207ENST00000544891 SETD4Q9NVD3 440 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 PSMD10O75832 226 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 MICAL2O94851 1124 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 HNRNPH3P31942 346 aaKnown RBP9.2□□□□□ -0.94
NECAP1-207ENST00000544891 SOX6P35712 828 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 CCNG1P51959 295 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 KCNMA1Q12791 1236 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 FAM45BPQ6NSW5 357 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 SMIM5Q71RC9 77 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 KCNMB4Q86W47 210 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 CDK20Q8IZL9 346 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 NKAPQ8N5F7 415 aaKnown RBP9.2□□□□□ -0.94
NECAP1-207ENST00000544891 TATDN2Q93075 761 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 AKT1S1Q96B36 256 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 PPP1R36Q96LQ0 422 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 DPY30Q9C005 99 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 KRT84Q9NSB2 600 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 UBA2Q9UBT2 640 aaPredicted RBP9.2□□□□□ -0.94
NECAP1-207ENST00000544891 CDH9Q9ULB4 789 aa9.2□□□□□ -0.94
NECAP1-207ENST00000544891 PLIN4Q96Q06 1357 aa9.19□□□□□ -0.94
NECAP1-207ENST00000544891 PRR23D1E9PI22 279 aaPredicted RBP9.19□□□□□ -0.94
NECAP1-207ENST00000544891 GLI1P08151 1106 aa9.19□□□□□ -0.94
NECAP1-207ENST00000544891 PRR23D2P0DMB1 279 aaPredicted RBP9.19□□□□□ -0.94
NECAP1-207ENST00000544891 FASP25445 335 aa9.19□□□□□ -0.94
NECAP1-207ENST00000544891 RPL3P39023 403 aaKnown RBP9.19□□□□□ -0.94
NECAP1-207ENST00000544891 ELK3P41970 407 aa9.19□□□□□ -0.94
NECAP1-207ENST00000544891 TUBP50607 506 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms