RNA–Protein interactions for RNA: ENST00000544800.1

CIT-215, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-215ENST00000544800 COCHO43405 550 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 USO1O60763 962 aaKnown RBP7.17□□□□□ -1.26
CIT-215ENST00000544800 ATP2C2O75185 946 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 RNASEH2AO75792 299 aaKnown RBP7.17□□□□□ -1.26
CIT-215ENST00000544800 SLITRK3O94933 977 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 F9P00740 461 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 F12P00748 615 aaPredicted RBP7.17□□□□□ -1.26
CIT-215ENST00000544800 TBC1D3HP0C7X1 549 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 MCM5P33992 734 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 MAGEA11P43364 429 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 RECQLP46063 649 aaPredicted RBP7.17□□□□□ -1.26
CIT-215ENST00000544800 RARRES1P49788 294 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 PGDP52209 483 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 NLRP5P59047 1200 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 USP46P62068 366 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 TLE4Q04727 773 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 ZFP36L1Q07352 338 aaKnown RBP7.17□□□□□ -1.26
CIT-215ENST00000544800 SPAG1Q07617 926 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 PPP2R5AQ15172 486 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 MIIPQ5JXC2 388 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 ATP1A1-AS1Q5TC04 95 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 TBC1D3GQ6DHY5 549 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 TBC1D3CQ6IPX1 549 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 CASC1Q6TDU7 716 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 BNC2Q6ZN30 1099 aaPredicted RBP7.17□□□□□ -1.26
CIT-215ENST00000544800 PARS2Q7L3T8 475 aaKnown RBP7.17□□□□□ -1.26
CIT-215ENST00000544800 ANKS1BQ7Z6G8 1248 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 SPATA2LQ8IUW3 424 aaPredicted RBP7.17□□□□□ -1.26
CIT-215ENST00000544800 TBC1D3Q8IZP1 549 aaPredicted RBP7.17□□□□□ -1.26
CIT-215ENST00000544800 Q8NA96 180 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 BICD2Q8TD16 824 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 CCDC12Q8WUD4 166 aaPredicted RBP7.17□□□□□ -1.26
CIT-215ENST00000544800 SORCS1Q8WY21 1168 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 BSNDQ8WZ55 320 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 NINJ1Q92982 152 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 SNRNP40Q96DI7 357 aaKnown RBP7.17□□□□□ -1.26
CIT-215ENST00000544800 PIWIL1Q96J94 861 aaKnown RBP7.17□□□□□ -1.26
CIT-215ENST00000544800 TAAR9Q96RI9 348 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 ACBD6Q9BR61 282 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 SRRTQ9BXP5 876 aaKnown RBP7.17□□□□□ -1.26
CIT-215ENST00000544800 RSPH9Q9H1X1 276 aaPredicted RBP7.17□□□□□ -1.26
CIT-215ENST00000544800 PLK2Q9NYY3 685 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 SERGEFQ9UGK8 458 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 PNMA8BQ9ULN7 279 aaPredicted RBP7.17□□□□□ -1.26
CIT-215ENST00000544800 PADI4Q9UM07 663 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 PCDHA12Q9UN75 941 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 PCDHGA3Q9Y5H0 932 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 CNTNAP5Q8WYK1 1306 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 SCN8AQ9UQD0 1980 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 ANK2Q01484 3957 aa7.17□□□□□ -1.26
CIT-215ENST00000544800 A0A1W2PP55 124 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 H3BM21 787 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 AGRPO00253 132 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 KCNAB3O43448 404 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 GREM1O60565 184 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 RAD1O60671 282 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 RNASEH1O60930 286 aaKnown RBP7.16□□□□□ -1.26
CIT-215ENST00000544800 RNGTTO60942 597 aaKnown RBP7.16□□□□□ -1.26
CIT-215ENST00000544800 TDP2O95551 362 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 ITGB3P05106 788 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 XRCC6P12956 609 aaKnown RBP eCLIP7.16□□□□□ -1.26
CIT-215ENST00000544800 NOP2P46087 812 aaKnown RBP7.16□□□□□ -1.26
CIT-215ENST00000544800 GUCY2FP51841 1108 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 PMS2P54278 862 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 ITGA1P56199 1179 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 CCL7P80098 99 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 TAF10Q12962 218 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 ENOX2Q16206 610 aaKnown RBP7.16□□□□□ -1.26
CIT-215ENST00000544800 SEZ6Q53EL9 994 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 FNDC3BQ53EP0 1204 aaKnown RBP7.16□□□□□ -1.26
CIT-215ENST00000544800 CLEC9AQ6UXN8 241 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 PIK3AP1Q6ZUJ8 805 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 ZNF366Q8N895 744 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 ZNF548Q8NEK5 533 aaPredicted RBP7.16□□□□□ -1.26
CIT-215ENST00000544800 OR14C36Q8NHC7 312 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 CHTF18Q8WVB6 975 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 STARD8Q92502 1023 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 BHMTQ93088 406 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 WBP2Q969T9 261 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 PPP1R13BQ96KQ4 1090 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 TSPAN18Q96SJ8 248 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 SPSB2Q99619 263 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 IL12RB2Q99665 862 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 SMR3AQ99954 134 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 PYM1Q9BRP8 204 aaKnown RBP7.16□□□□□ -1.26
CIT-215ENST00000544800 BOCQ9BWV1 1114 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 CCSER1Q9C0I3 900 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 CHMP4BQ9H444 224 aaKnown RBP7.16□□□□□ -1.26
CIT-215ENST00000544800 ASF1BQ9NVP2 202 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 AKAP7Q9P0M2 348 aaPredicted RBP7.16□□□□□ -1.26
CIT-215ENST00000544800 SUN2Q9UH99 717 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 GTF3C4Q9UKN8 822 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 POLHQ9Y253 713 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 SLC12A7Q9Y666 1083 aa7.16□□□□□ -1.26
CIT-215ENST00000544800 TTC26A0AVF1 554 aa7.15□□□□□ -1.26
CIT-215ENST00000544800 ZSCAN5CA6NGD5 496 aaPredicted RBP7.15□□□□□ -1.26
CIT-215ENST00000544800 PIRO00625 290 aa7.15□□□□□ -1.26
CIT-215ENST00000544800 PENKP01210 267 aaPredicted RBP7.15□□□□□ -1.26
CIT-215ENST00000544800 RPLP0P05388 317 aaKnown RBP7.15□□□□□ -1.26
CIT-215ENST00000544800 HEXAP06865 529 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms