RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 GP5P40197 560 aa13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 CYLC2Q14093 348 aaPredicted RBP13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 ZNF460Q14592 562 aa13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 PDK1Q15118 436 aa13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 CWF19L1Q69YN2 538 aaKnown RBP13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 CATSPERGQ6ZRH7 1159 aa13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 CTU1Q7Z7A3 348 aaKnown RBP13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 CAND1Q86VP6 1230 aaKnown RBP13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 REPS2Q8NFH8 660 aa13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 P2RY11Q96G91 374 aa13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 C2CD4BA6NLJ0 364 aa13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 C9JVG2 144 aa13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 TRDMT1O14717 391 aaKnown RBP13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 CHRNGP07510 517 aa13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 HNRNPCP07910 306 aaKnown RBP eCLIP13.55□□□□□ -0.244e-6■□□□□ 9.7
PCMTD1-208ENST00000544451 HNRNPLP14866 589 aaKnown RBP eCLIP13.55□□□□□ -0.241e-7■■□□□ 12.7
PCMTD1-208ENST00000544451 ETFBP38117 255 aa13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 ALDH1A3P47895 512 aa13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 STX1BP61266 288 aa13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 CCDC142Q17RM4 750 aa13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 ARMCX2Q7L311 632 aa13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 DDIASQ8IXT1 998 aa13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 ARHGAP18Q8N392 663 aa13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 AFAP1L2Q8N4X5 818 aa13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 NPAS2Q99743 824 aa13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 WDR83Q9BRX9 315 aaKnown RBP13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 DCUN1D5Q9BTE7 237 aa13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 KCNK13Q9HB14 408 aa13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 KRT82Q9NSB4 513 aa13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 CDH22Q9UJ99 828 aa13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 CDYLQ9Y232 598 aa13.55□□□□□ -0.24
PCMTD1-208ENST00000544451 TK2O00142 265 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 MFSD11O43934 449 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 VAPBO95292 243 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 VCLP18206 1134 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 IRF9Q00978 393 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 IL1RL1Q01638 556 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 CTBP1Q13363 440 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 SFT2D3Q587I9 215 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 RBM44Q6ZP01 1051 aaKnown RBP13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 FRMD7Q6ZUT3 714 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 MARK2Q7KZI7 788 aaKnown RBP13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 CHSY1Q86X52 802 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 MYLK4Q86YV6 388 aaPredicted RBP13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 CHST13Q8NET6 341 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 HASPINQ8TF76 798 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 NDNQ99608 321 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 PLEKHA5Q9HAU0 1116 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 NMRAL1Q9HBL8 299 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 ETAA1Q9NY74 926 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 TUBGCP4Q9UGJ1 667 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 SIX4Q9UIU6 781 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 PCDHA11Q9Y5I1 949 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 SNX10Q9Y5X0 201 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 TRIM13O60858 407 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 RFPL1O75677 317 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 MRPS5P82675 430 aaKnown RBP13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 PLOD1Q02809 727 aaPredicted RBP13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 CSHL1Q14406 222 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 KRT72Q14CN4 511 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 ANKRD20A4Q4UJ75 823 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 C6orf52Q5T4I8 152 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 AMIGO2Q86SJ2 522 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 RELL1Q8IUW5 271 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 MFN1Q8IWA4 741 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 KYQ8NBH2 561 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 CERS2Q96G23 380 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 CSPG4P5Q96PW8 444 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 DYNC1LI2O43237 492 aaPredicted RBP13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 ACTR3P61158 418 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 GRIK3Q13003 919 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 KCNJ11Q14654 390 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 LIN52Q52LA3 116 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 TP53INP2Q8IXH6 220 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 ENDOVQ8N8Q3 282 aaKnown RBP13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 KCTD4Q8WVF5 259 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 CHRAC1Q9NRG0 131 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 PCDHGC3Q9UN70 934 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 POMPQ9Y244 141 aa13.54□□□□□ -0.24
PCMTD1-208ENST00000544451 HNRNPRO43390 633 aaKnown RBP13.53□□□□□ -0.24
PCMTD1-208ENST00000544451 RNASEH1O60930 286 aaKnown RBP13.53□□□□□ -0.24
PCMTD1-208ENST00000544451 GRK2P25098 689 aa13.53□□□□□ -0.24
PCMTD1-208ENST00000544451 RXRBP28702 533 aa13.53□□□□□ -0.24
PCMTD1-208ENST00000544451 PTK2BQ14289 1009 aa13.53□□□□□ -0.24
PCMTD1-208ENST00000544451 AGKQ53H12 422 aa13.53□□□□□ -0.24
PCMTD1-208ENST00000544451 KYAT3Q6YP21 454 aaKnown RBP13.53□□□□□ -0.24
PCMTD1-208ENST00000544451 SCN4BQ8IWT1 228 aa13.53□□□□□ -0.24
PCMTD1-208ENST00000544451 EXOC8Q8IYI6 725 aa13.53□□□□□ -0.24
PCMTD1-208ENST00000544451 RNF139Q8WU17 664 aa13.53□□□□□ -0.24
PCMTD1-208ENST00000544451 FRMD8Q9BZ67 464 aaPredicted RBP13.53□□□□□ -0.24
PCMTD1-208ENST00000544451 XYLT2Q9H1B5 865 aa13.53□□□□□ -0.24
PCMTD1-208ENST00000544451 NFASCO94856 1347 aa13.53□□□□□ -0.24
PCMTD1-208ENST00000544451 SAC3D1A6NKF1 404 aa13.53□□□□□ -0.24
PCMTD1-208ENST00000544451 GOLGA8CPA6NN73 597 aa13.53□□□□□ -0.24
PCMTD1-208ENST00000544451 LIN7AO14910 233 aaPredicted RBP13.53□□□□□ -0.24
PCMTD1-208ENST00000544451 PLIN3O60664 434 aa13.53□□□□□ -0.24
PCMTD1-208ENST00000544451 TGDSO95455 350 aa13.53□□□□□ -0.24
PCMTD1-208ENST00000544451 CTSHP09668 335 aa13.53□□□□□ -0.24
PCMTD1-208ENST00000544451 IDH3AP50213 366 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms