RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 ZNF846Q147U1 533 aa10.59□□□□□ -0.71
TCF4-209ENST00000544241 PCLAFQ15004 111 aa10.59□□□□□ -0.71
TCF4-209ENST00000544241 CYP2A13Q16696 494 aa10.59□□□□□ -0.71
TCF4-209ENST00000544241 GPR107Q5VW38 600 aa10.59□□□□□ -0.71
TCF4-209ENST00000544241 CLEC10AQ8IUN9 316 aa10.59□□□□□ -0.71
TCF4-209ENST00000544241 CPSF7Q8N684 471 aaKnown RBP10.59□□□□□ -0.71
TCF4-209ENST00000544241 SAMD3Q8N6K7 520 aa10.59□□□□□ -0.71
TCF4-209ENST00000544241 FNIP1Q8TF40 1166 aa10.59□□□□□ -0.71
TCF4-209ENST00000544241 SLC7A3Q8WY07 619 aa10.59□□□□□ -0.71
TCF4-209ENST00000544241 PPWD1Q96BP3 646 aaKnown RBP10.59□□□□□ -0.71
TCF4-209ENST00000544241 DUS3LQ96G46 650 aaKnown RBP10.59□□□□□ -0.71
TCF4-209ENST00000544241 ZNF641Q96N77 438 aaPredicted RBP10.59□□□□□ -0.71
TCF4-209ENST00000544241 ZNF347Q96SE7 839 aa10.59□□□□□ -0.71
TCF4-209ENST00000544241 PI4K2AQ9BTU6 479 aa10.59□□□□□ -0.71
TCF4-209ENST00000544241 WDR18Q9BV38 432 aa10.59□□□□□ -0.71
TCF4-209ENST00000544241 CD320Q9NPF0 282 aa10.59□□□□□ -0.71
TCF4-209ENST00000544241 NYAP2Q9P242 653 aa10.59□□□□□ -0.71
TCF4-209ENST00000544241 SAE1Q9UBE0 346 aaPredicted RBP10.59□□□□□ -0.71
TCF4-209ENST00000544241 MID2Q9UJV3 735 aa10.59□□□□□ -0.71
TCF4-209ENST00000544241 SNX13Q9Y5W8 968 aa10.59□□□□□ -0.71
TCF4-209ENST00000544241 SCN4AP35499 1836 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 SLC16A4O15374 487 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 GCATO75600 419 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 KRT75O95678 551 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 LDHAP00338 332 aaKnown RBP10.58□□□□□ -0.72
TCF4-209ENST00000544241 CSH1P0DML2 217 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 CSH2P0DML3 217 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 YBX3P16989 372 aaKnown RBP eCLIP10.58□□□□□ -0.72
TCF4-209ENST00000544241 GARTP22102 1010 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 PSMA2P25787 234 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 PSMD8P48556 350 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 ATP6V0D1P61421 351 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 MS4A2Q01362 244 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 ZNF252P-AS1Q0IIN9 211 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 BNIP3Q12983 259 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 DMP1Q13316 513 aaPredicted RBP10.58□□□□□ -0.72
TCF4-209ENST00000544241 PICALMQ13492 652 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 CEACAM7Q14002 265 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 NHSL2Q5HYW2 709 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 FGD3Q5JSP0 725 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 C6orf183Q5T699 404 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 SMYD5Q6GMV2 418 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 TMEM214Q6NUQ4 689 aaKnown RBP10.58□□□□□ -0.72
TCF4-209ENST00000544241 NEK10Q6ZWH5 1172 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 C10orf107Q8IVU9 208 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 TTC30BQ8N4P2 665 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 ANKFN1Q8N957 763 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 MFSD2AQ8NA29 543 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.58□□□□□ -0.72
TCF4-209ENST00000544241 RAB2BQ8WUD1 216 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 KLHL32Q96NJ5 620 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 UHRF1Q96T88 793 aaPredicted RBP10.58□□□□□ -0.72
TCF4-209ENST00000544241 MMP19Q99542 508 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 ILKAPQ9H0C8 392 aaPredicted RBP10.58□□□□□ -0.72
TCF4-209ENST00000544241 UPF3AQ9H1J1 476 aaKnown RBP10.58□□□□□ -0.72
TCF4-209ENST00000544241 KCNQ5Q9NR82 932 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 WRAP73Q9P2S5 460 aaPredicted RBP10.58□□□□□ -0.72
TCF4-209ENST00000544241 CNTN6Q9UQ52 1028 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 C1orf232A0A0U1RR37 186 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 A0A1B0GTW7 788 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 SLC15A5A6NIM6 579 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 NDUFB5O43674 189 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 HSPA8P11142 646 aaKnown RBP10.58□□□□□ -0.72
TCF4-209ENST00000544241 PTPN1P18031 435 aaKnown RBP10.58□□□□□ -0.72
TCF4-209ENST00000544241 HOXA13P31271 388 aaPredicted RBP10.58□□□□□ -0.72
TCF4-209ENST00000544241 GARSP41250 739 aaKnown RBP10.58□□□□□ -0.72
TCF4-209ENST00000544241 MAGEA6P43360 314 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 RARRES1P49788 294 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 NFATC3Q12968 1075 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 TUBA3CQ13748 450 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 RAB39AQ14964 217 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 KCNJ8Q15842 424 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 GRIK5Q16478 980 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 AARS2Q5JTZ9 985 aaKnown RBP10.58□□□□□ -0.72
TCF4-209ENST00000544241 VWA5B1Q5TIE3 1220 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 MAMDC4Q6UXC1 1216 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 UNC5AQ6ZN44 842 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 C15orf39Q6ZRI6 1047 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 KRT27Q7Z3Y8 459 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 ZSWIM2Q8NEG5 633 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 C8orf37Q96NL8 207 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 EBNA1BP2Q99848 306 aaKnown RBP10.58□□□□□ -0.72
TCF4-209ENST00000544241 KLHL25Q9H0H3 589 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 TOPORSQ9NS56 1045 aaPredicted RBP10.58□□□□□ -0.72
TCF4-209ENST00000544241 TXNDC16Q9P2K2 825 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 CARD8Q9Y2G2 431 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 ATP11BQ9Y2G3 1177 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 PCDHA11Q9Y5I1 949 aa10.58□□□□□ -0.72
TCF4-209ENST00000544241 CLDN25C9JDP6 229 aa10.57□□□□□ -0.72
TCF4-209ENST00000544241 AREL1O15033 823 aa10.57□□□□□ -0.72
TCF4-209ENST00000544241 PAPSS1O43252 624 aaPredicted RBP10.57□□□□□ -0.72
TCF4-209ENST00000544241 AVILO75366 819 aa10.57□□□□□ -0.72
TCF4-209ENST00000544241 PARNO95453 639 aaKnown RBP10.57□□□□□ -0.72
TCF4-209ENST00000544241 CALCAP01258 141 aa10.57□□□□□ -0.72
TCF4-209ENST00000544241 BMP2P12643 396 aa10.57□□□□□ -0.72
TCF4-209ENST00000544241 ACO1P21399 889 aaKnown RBP10.57□□□□□ -0.72
TCF4-209ENST00000544241 CDH15P55291 814 aa10.57□□□□□ -0.72
TCF4-209ENST00000544241 PKNOX1P55347 436 aa10.57□□□□□ -0.72
TCF4-209ENST00000544241 PRAMEP78395 509 aa10.57□□□□□ -0.72
TCF4-209ENST00000544241 SLC25A11Q02978 314 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms