RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 MRGPRX1Q96LB2 322 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 PKMYT1Q99640 499 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 HAPLN2Q9GZV7 340 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 PCED1AQ9H1Q7 454 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 ASB7Q9H672 318 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 DDX19AQ9NUU7 478 aaKnown RBP4.9□□□□□ -1.63
SNHG1-214ENST00000540865 WSB2Q9NYS7 404 aaPredicted RBP4.9□□□□□ -1.63
SNHG1-214ENST00000540865 EHD2Q9NZN4 543 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 USP36Q9P275 1121 aaKnown RBP4.9□□□□□ -1.63
SNHG1-214ENST00000540865 TJP2Q9UDY2 1190 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 DNM3Q9UQ16 869 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 C2CD2Q9Y426 696 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 PCDHB6Q9Y5E3 794 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 CPQQ9Y646 472 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 BOD1L1Q8NFC6 3051 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 CABIN1Q9Y6J0 2220 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 TEP1Q99973 2627 aaKnown RBP4.89□□□□□ -1.63
SNHG1-214ENST00000540865 ARID2Q68CP9 1835 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 A0A0B4J269 797 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 A0A1B0GVT2 93 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 ZNF840PA6NDX5 716 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 KPNA7A9QM74 516 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 PYCARD-AS1I3L0S3 204 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 PAPSS1O43252 624 aaPredicted RBP4.89□□□□□ -1.63
SNHG1-214ENST00000540865 DFNA5O60443 496 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 DNAJA2O60884 412 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 TULP3O75386 442 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 CDC45O75419 566 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 RFPL3O75679 317 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 OAS1P00973 400 aaKnown RBP4.89□□□□□ -1.63
SNHG1-214ENST00000540865 PIGRP01833 764 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 OR52Z1P0C646 297 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 FAM87AP0C7U9 286 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 PLCG1P19174 1290 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 GUCY2CP25092 1073 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 MCM7P33993 719 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 ACTN2P35609 894 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 PNPLA4P41247 253 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 LIG4P49917 911 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 CCT8P50990 548 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 AFF3P51826 1226 aaKnown RBP4.89□□□□□ -1.63
SNHG1-214ENST00000540865 ZNF132P52740 706 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 TMPRSS3P57727 454 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 MYL7Q01449 175 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 POU5F1Q01860 360 aaKnown RBP4.89□□□□□ -1.63
SNHG1-214ENST00000540865 CLCQ05315 142 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 TARDBPQ13148 414 aaKnown RBP eCLIP4.89□□□□□ -1.63
SNHG1-214ENST00000540865 SLBPQ14493 270 aaKnown RBP eCLIP4.89□□□□□ -1.632e-8■□□□□ 9.6
SNHG1-214ENST00000540865 SF3A1Q15459 793 aaKnown RBP4.89□□□□□ -1.63
SNHG1-214ENST00000540865 KIF19Q2TAC6 998 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 TBC1D25Q3MII6 688 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 CCDC157Q569K6 752 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 DCAF12L1Q5VU92 463 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 BROXQ5VW32 411 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 EGFLAMQ63HQ2 1017 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 RINT1Q6NUQ1 792 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 VSTM1Q6UX27 236 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 KIAA1324Q6UXG2 1013 aaKnown RBP4.89□□□□□ -1.63
SNHG1-214ENST00000540865 GK5Q6ZS86 529 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 DENND5BQ6ZUT9 1274 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 ZAR1Q86SH2 424 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 SPATA2LQ8IUW3 424 aaPredicted RBP4.89□□□□□ -1.63
SNHG1-214ENST00000540865 DIS3L2Q8IYB7 885 aaKnown RBP4.89□□□□□ -1.63
SNHG1-214ENST00000540865 TMEM86AQ8N2M4 240 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 PDCL2Q8N4E4 241 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 NAT16Q8N8M0 369 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 NKD1Q969G9 470 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 IGSF8Q969P0 613 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 BICD1Q96G01 975 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 MED8Q96G25 268 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 TTLL2Q9BWV7 592 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 GPR174Q9BXC1 333 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 NT5C1AQ9BXI3 368 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 KRTAP4-9Q9BYQ8 210 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 SEMA4CQ9C0C4 833 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 TGIF2Q9GZN2 237 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 RNF38Q9H0F5 515 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 CCSER2Q9H7U1 834 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 CD93Q9NPY3 652 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 ITM2CQ9NQX7 267 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 DPP3Q9NY33 737 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 GMIPQ9P107 970 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 CFAP97Q9P2B7 532 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 ORC3Q9UBD5 711 aaPredicted RBP4.89□□□□□ -1.63
SNHG1-214ENST00000540865 REV1Q9UBZ9 1251 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 FTSJ1Q9UET6 329 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 LRWD1Q9UFC0 647 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 IL17BQ9UHF5 180 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 CPSF3Q9UKF6 684 aaKnown RBP4.89□□□□□ -1.63
SNHG1-214ENST00000540865 GTF3C4Q9UKN8 822 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 PCDHB14Q9Y5E9 798 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 CYP46A1Q9Y6A2 500 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 RELNP78509 3460 aa4.89□□□□□ -1.63
SNHG1-214ENST00000540865 TNRC6BQ9UPQ9 1833 aaKnown RBP4.88□□□□□ -1.63
SNHG1-214ENST00000540865 E9PMD0 336 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 GABRDO14764 452 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 HNRNPDLO14979 420 aaKnown RBP4.88□□□□□ -1.63
SNHG1-214ENST00000540865 NPC1O15118 1278 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 BRINP1O60477 761 aa4.88□□□□□ -1.63
SNHG1-214ENST00000540865 PFKFB2O60825 505 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms