RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ARHGEF4Q9NR80 690 aa14.96□□□□□ -0.02
CDCA3-207ENST00000538862 THAP1Q9NVV9 213 aa14.96□□□□□ -0.02
CDCA3-207ENST00000538862 SNTG2Q9NY99 539 aa14.96□□□□□ -0.02
CDCA3-207ENST00000538862 DTLQ9NZJ0 730 aa14.96□□□□□ -0.02
CDCA3-207ENST00000538862 SORCS3Q9UPU3 1222 aa14.96□□□□□ -0.02
CDCA3-207ENST00000538862 C2orf71A6NGG8 1288 aa14.95□□□□□ -0.02
CDCA3-207ENST00000538862 HOXA11P31270 313 aaPredicted RBP14.95□□□□□ -0.02
CDCA3-207ENST00000538862 BMP8BP34820 402 aa14.95□□□□□ -0.02
CDCA3-207ENST00000538862 ARL4AP40617 200 aa14.95□□□□□ -0.02
CDCA3-207ENST00000538862 STX3Q13277 289 aa14.95□□□□□ -0.02
CDCA3-207ENST00000538862 NAB1Q13506 487 aa14.95□□□□□ -0.02
CDCA3-207ENST00000538862 ACSBG2Q5FVE4 666 aa14.95□□□□□ -0.02
CDCA3-207ENST00000538862 SLC27A1Q6PCB7 646 aa14.95□□□□□ -0.02
CDCA3-207ENST00000538862 ALYREFQ86V81 257 aaKnown RBP14.95□□□□□ -0.02
CDCA3-207ENST00000538862 ADGRF2Q8IZF7 708 aa14.95□□□□□ -0.02
CDCA3-207ENST00000538862 C7orf31Q8N865 590 aa14.95□□□□□ -0.02
CDCA3-207ENST00000538862 LRRN4Q8WUT4 740 aa14.95□□□□□ -0.02
CDCA3-207ENST00000538862 DNAJC9Q8WXX5 260 aa14.95□□□□□ -0.02
CDCA3-207ENST00000538862 EIF2B3Q9NR50 452 aaKnown RBP14.95□□□□□ -0.02
CDCA3-207ENST00000538862 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.95□□□□□ -0.02
CDCA3-207ENST00000538862 CORO1CQ9ULV4 474 aaPredicted RBP14.95□□□□□ -0.02
CDCA3-207ENST00000538862 USP3Q9Y6I4 520 aa14.95□□□□□ -0.02
CDCA3-207ENST00000538862 SDR42E2A6NKP2 422 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 F8W8V4 182 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 CYB561D2O14569 222 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 KPNA6O60684 536 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 SMNDC1O75940 238 aaKnown RBP eCLIP14.94□□□□□ -0.02
CDCA3-207ENST00000538862 PSMG1O95456 288 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 PGM1P36871 562 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 GRIA1P42261 906 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 ABL2P42684 1182 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 KPNB1Q14974 876 aaKnown RBP14.94□□□□□ -0.02
CDCA3-207ENST00000538862 PCBP1Q15365 356 aaKnown RBP eCLIP14.94□□□□□ -0.02
CDCA3-207ENST00000538862 CCDC6Q16204 474 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 EFHC1Q5JVL4 640 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 C9orf57Q5W0N0 161 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 CES4AQ5XG92 561 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 LRRC8BQ6P9F7 803 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 ALKAL1Q6UXT8 129 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 LMNTD2Q8IXW0 634 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 CDKL2Q92772 493 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 FERMT1Q9BQL6 677 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 CXCL16Q9H2A7 254 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 TUBGCP4Q9UGJ1 667 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 TAGLN3Q9UI15 199 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 HBS1LQ9Y450 684 aaKnown RBP14.94□□□□□ -0.02
CDCA3-207ENST00000538862 B2RBV5 119 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 STK10O94804 968 aaKnown RBP14.94□□□□□ -0.02
CDCA3-207ENST00000538862 SERPINA6P08185 405 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 CYP2C9P11712 490 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 AMPD1P23109 780 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 CYP2C18P33260 490 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 ATXN1P54253 815 aaKnown RBP14.94□□□□□ -0.02
CDCA3-207ENST00000538862 AQP5P55064 265 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 SLC34A1Q06495 639 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 NIPAL4Q0D2K0 466 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 RCN1Q15293 331 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 TDHQ8IZJ6 230 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 CCDC185Q8N715 623 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 CLEC4CQ8WTT0 213 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 NAT9Q9BTE0 207 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 ADAMTS10Q9H324 1103 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 DPEP3Q9H4B8 488 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 ARMCX1Q9P291 453 aa14.94□□□□□ -0.02
CDCA3-207ENST00000538862 STX18Q9P2W9 335 aaKnown RBP14.94□□□□□ -0.02
CDCA3-207ENST00000538862 PPARGC1AQ9UBK2 798 aaKnown RBP14.94□□□□□ -0.02
CDCA3-207ENST00000538862 UBQLN1Q9UMX0 589 aaKnown RBP14.94□□□□□ -0.02
CDCA3-207ENST00000538862 CCDC189A1A4V9 331 aa14.93□□□□□ -0.02
CDCA3-207ENST00000538862 WDR27A2RRH5 827 aa14.93□□□□□ -0.02
CDCA3-207ENST00000538862 SOX1O00570 391 aaPredicted RBP14.93□□□□□ -0.02
CDCA3-207ENST00000538862 PIRO00625 290 aa14.93□□□□□ -0.02
CDCA3-207ENST00000538862 NVLO15381 856 aaKnown RBP14.93□□□□□ -0.02
CDCA3-207ENST00000538862 OPHN1O60890 802 aa14.93□□□□□ -0.02
CDCA3-207ENST00000538862 GLRA3O75311 464 aa14.93□□□□□ -0.02
CDCA3-207ENST00000538862 TIMP1P01033 207 aa14.93□□□□□ -0.02
CDCA3-207ENST00000538862 HOXD8P13378 290 aaPredicted RBP14.93□□□□□ -0.02
CDCA3-207ENST00000538862 LCP1P13796 627 aa14.93□□□□□ -0.02
CDCA3-207ENST00000538862 ADORA2BP29275 332 aa14.93□□□□□ -0.02
CDCA3-207ENST00000538862 GNL1P36915 607 aaPredicted RBP14.93□□□□□ -0.02
CDCA3-207ENST00000538862 MATKP42679 507 aa14.93□□□□□ -0.02
CDCA3-207ENST00000538862 GLUD2P49448 558 aa14.93□□□□□ -0.02
CDCA3-207ENST00000538862 C9orf50Q5SZB4 431 aa14.93□□□□□ -0.02
CDCA3-207ENST00000538862 TREML1Q86YW5 311 aa14.93□□□□□ -0.02
CDCA3-207ENST00000538862 STMN2Q93045 179 aa14.93□□□□□ -0.02
CDCA3-207ENST00000538862 ATP2A3Q93084 1043 aa14.93□□□□□ -0.02
CDCA3-207ENST00000538862 TRIM56Q9BRZ2 755 aaKnown RBP14.93□□□□□ -0.02
CDCA3-207ENST00000538862 CCDC106Q9BWC9 280 aa14.93□□□□□ -0.02
CDCA3-207ENST00000538862 MAGEB5Q9BZ81 275 aa14.93□□□□□ -0.02
CDCA3-207ENST00000538862 TRIM6Q9C030 488 aaPredicted RBP14.93□□□□□ -0.02
CDCA3-207ENST00000538862 STN1Q9H668 368 aaKnown RBP14.93□□□□□ -0.02
CDCA3-207ENST00000538862 GDAP2Q9NXN4 497 aa14.93□□□□□ -0.02
CDCA3-207ENST00000538862 DCDC2Q9UHG0 476 aa14.93□□□□□ -0.02
CDCA3-207ENST00000538862 FZD10Q9ULW2 581 aa14.93□□□□□ -0.02
CDCA3-207ENST00000538862 CCDC195A0A1B0GUA6 201 aa14.92□□□□□ -0.02
CDCA3-207ENST00000538862 A6NHS1 94 aa14.92□□□□□ -0.02
CDCA3-207ENST00000538862 RRN3P2A6NIE6 340 aa14.92□□□□□ -0.02
CDCA3-207ENST00000538862 ZNF189O75820 626 aaPredicted RBP14.92□□□□□ -0.02
CDCA3-207ENST00000538862 CCDC130P13994 396 aa14.92□□□□□ -0.02
CDCA3-207ENST00000538862 VAV1P15498 845 aa14.92□□□□□ -0.02
CDCA3-207ENST00000538862 GOT1P17174 413 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms