RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 RAP1GAP2Q684P5 730 aa17.78■□□□□ 0.44
CLN6-202ENST00000538696 TRIM68Q6AZZ1 485 aa17.78■□□□□ 0.44
CLN6-202ENST00000538696 C8orf74Q6P047 294 aa17.78■□□□□ 0.44
CLN6-202ENST00000538696 YAF2Q8IY57 180 aa17.78■□□□□ 0.44
CLN6-202ENST00000538696 ANKRD7Q92527 254 aa17.78■□□□□ 0.44
CLN6-202ENST00000538696 NXPE3Q969Y0 559 aa17.78■□□□□ 0.44
CLN6-202ENST00000538696 MYEOVQ96EZ4 313 aa17.78■□□□□ 0.44
CLN6-202ENST00000538696 HAPLN3Q96S86 360 aa17.78■□□□□ 0.44
CLN6-202ENST00000538696 PRMT1Q99873 361 aaKnown RBP17.78■□□□□ 0.44
CLN6-202ENST00000538696 LINC00597Q9H2U6 94 aa17.78■□□□□ 0.44
CLN6-202ENST00000538696 DUS2Q9NX74 493 aaKnown RBP17.78■□□□□ 0.44
CLN6-202ENST00000538696 TBC1D14Q9P2M4 693 aa17.78■□□□□ 0.44
CLN6-202ENST00000538696 AP4E1Q9UPM8 1137 aa17.78■□□□□ 0.44
CLN6-202ENST00000538696 KIAA1549LQ6ZVL6 1849 aa17.77■□□□□ 0.44
CLN6-202ENST00000538696 hCG_1818297A0A087WSY0 165 aa17.77■□□□□ 0.44
CLN6-202ENST00000538696 GFRA2O00451 464 aa17.77■□□□□ 0.44
CLN6-202ENST00000538696 SLC9A3R1O14745 358 aaPredicted RBP17.77■□□□□ 0.44
CLN6-202ENST00000538696 RAD51CO43502 376 aa17.77■□□□□ 0.44
CLN6-202ENST00000538696 PHF2O75151 1096 aa17.77■□□□□ 0.44
CLN6-202ENST00000538696 CD48P09326 243 aa17.77■□□□□ 0.44
CLN6-202ENST00000538696 KRT10P13645 584 aa17.77■□□□□ 0.44
CLN6-202ENST00000538696 ARSAP15289 507 aa17.77■□□□□ 0.44
CLN6-202ENST00000538696 TACR2P21452 398 aa17.77■□□□□ 0.44
CLN6-202ENST00000538696 KDELR1P24390 212 aa17.77■□□□□ 0.44
CLN6-202ENST00000538696 GDI1P31150 447 aa17.77■□□□□ 0.44
CLN6-202ENST00000538696 CDKN2BP42772 138 aa17.77■□□□□ 0.44
CLN6-202ENST00000538696 ARSEP51690 589 aa17.77■□□□□ 0.44
CLN6-202ENST00000538696 MTA1Q13330 715 aa17.77■□□□□ 0.44
CLN6-202ENST00000538696 KLF1Q13351 362 aaPredicted RBP17.77■□□□□ 0.44
CLN6-202ENST00000538696 EML3Q32P44 896 aa17.77■□□□□ 0.44
CLN6-202ENST00000538696 ARTNQ5T4W7 220 aa17.77■□□□□ 0.44
CLN6-202ENST00000538696 ADGRF1Q5T601 910 aa17.77■□□□□ 0.44
CLN6-202ENST00000538696 ERMARDQ5T6L9 678 aa17.77■□□□□ 0.44
CLN6-202ENST00000538696 CHSY1Q86X52 802 aa17.77■□□□□ 0.44
CLN6-202ENST00000538696 PYROXD2Q8N2H3 581 aa17.77■□□□□ 0.44
CLN6-202ENST00000538696 CPXM2Q8N436 756 aa17.77■□□□□ 0.44
CLN6-202ENST00000538696 TEKT4Q8WW24 435 aa17.77■□□□□ 0.44
CLN6-202ENST00000538696 OTUB2Q96DC9 234 aa17.77■□□□□ 0.44
CLN6-202ENST00000538696 PRICKLE1Q96MT3 831 aaPredicted RBP17.77■□□□□ 0.44
CLN6-202ENST00000538696 FAM83CQ9BQN1 747 aa17.77■□□□□ 0.44
CLN6-202ENST00000538696 TRMT61BQ9BVS5 477 aaKnown RBP17.77■□□□□ 0.44
CLN6-202ENST00000538696 PARD6BQ9BYG5 372 aa17.77■□□□□ 0.44
CLN6-202ENST00000538696 HPS4Q9NQG7 708 aa17.77■□□□□ 0.44
CLN6-202ENST00000538696 THG1LQ9NWX6 298 aaKnown RBP17.77■□□□□ 0.44
CLN6-202ENST00000538696 ARNTLO00327 626 aa17.76■□□□□ 0.43
CLN6-202ENST00000538696 TRDMT1O14717 391 aaKnown RBP17.76■□□□□ 0.43
CLN6-202ENST00000538696 CHADO15335 359 aa17.76■□□□□ 0.43
CLN6-202ENST00000538696 CETN2P41208 172 aa17.76■□□□□ 0.43
CLN6-202ENST00000538696 COPS2P61201 443 aa17.76■□□□□ 0.43
CLN6-202ENST00000538696 SLC7A5Q01650 507 aa17.76■□□□□ 0.43
CLN6-202ENST00000538696 ADCY2Q08462 1091 aa17.76■□□□□ 0.43
CLN6-202ENST00000538696 PDGFRLQ15198 375 aa17.76■□□□□ 0.43
CLN6-202ENST00000538696 PPP2R5EQ16537 467 aa17.76■□□□□ 0.43
CLN6-202ENST00000538696 TAZQ16635 292 aa17.76■□□□□ 0.43
CLN6-202ENST00000538696 ODF2Q5BJF6 829 aa17.76■□□□□ 0.43
CLN6-202ENST00000538696 KAZNQ674X7 775 aa17.76■□□□□ 0.43
CLN6-202ENST00000538696 CCDC70Q6NSX1 233 aa17.76■□□□□ 0.43
CLN6-202ENST00000538696 RFWD3Q6PCD5 774 aa17.76■□□□□ 0.43
CLN6-202ENST00000538696 C14orf80Q86SX3 495 aa17.76■□□□□ 0.43
CLN6-202ENST00000538696 PSTKQ8IV42 348 aaKnown RBP17.76■□□□□ 0.43
CLN6-202ENST00000538696 ZNF683Q8IZ20 524 aa17.76■□□□□ 0.43
CLN6-202ENST00000538696 SLC44A3Q8N4M1 653 aa17.76■□□□□ 0.43
CLN6-202ENST00000538696 P2RY11Q96G91 374 aa17.76■□□□□ 0.43
CLN6-202ENST00000538696 KCTD15Q96SI1 283 aaPredicted RBP17.76■□□□□ 0.43
CLN6-202ENST00000538696 SIK2Q9H0K1 926 aa17.76■□□□□ 0.43
CLN6-202ENST00000538696 OSBPL2Q9H1P3 480 aa17.76■□□□□ 0.43
CLN6-202ENST00000538696 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.76■□□□□ 0.43
CLN6-202ENST00000538696 R3HDM2Q9Y2K5 976 aaKnown RBP17.76■□□□□ 0.43
CLN6-202ENST00000538696 TARSL2A2RTX5 802 aaKnown RBP17.75■□□□□ 0.43
CLN6-202ENST00000538696 FAM72CH0Y354 149 aa17.75■□□□□ 0.43
CLN6-202ENST00000538696 CYP17A1P05093 508 aa17.75■□□□□ 0.43
CLN6-202ENST00000538696 SGSHP51688 502 aa17.75■□□□□ 0.43
CLN6-202ENST00000538696 MLLT6P55198 1093 aaPredicted RBP17.75■□□□□ 0.43
CLN6-202ENST00000538696 CDH6P55285 790 aa17.75■□□□□ 0.43
CLN6-202ENST00000538696 NRG1Q02297 640 aaPredicted RBP17.75■□□□□ 0.43
CLN6-202ENST00000538696 TNK2Q07912 1038 aa17.75■□□□□ 0.43
CLN6-202ENST00000538696 SEMA3BQ13214 749 aa17.75■□□□□ 0.43
CLN6-202ENST00000538696 AUHQ13825 339 aaKnown RBP17.75■□□□□ 0.43
CLN6-202ENST00000538696 CYP1B1Q16678 543 aa17.75■□□□□ 0.43
CLN6-202ENST00000538696 BOLA3Q53S33 107 aa17.75■□□□□ 0.43
CLN6-202ENST00000538696 FAM72AQ5TYM5 149 aa17.75■□□□□ 0.43
CLN6-202ENST00000538696 MANEALQ5VSG8 457 aa17.75■□□□□ 0.43
CLN6-202ENST00000538696 FAM72DQ6L9T8 149 aa17.75■□□□□ 0.43
CLN6-202ENST00000538696 TTC27Q6P3X3 843 aa17.75■□□□□ 0.43
CLN6-202ENST00000538696 FAM72BQ86X60 149 aa17.75■□□□□ 0.43
CLN6-202ENST00000538696 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.75■□□□□ 0.43
CLN6-202ENST00000538696 LGI2Q8N0V4 545 aa17.75■□□□□ 0.43
CLN6-202ENST00000538696 C12orf50Q8NA57 414 aaPredicted RBP17.75■□□□□ 0.43
CLN6-202ENST00000538696 KCTD6Q8NC69 237 aa17.75■□□□□ 0.43
CLN6-202ENST00000538696 MAIP1Q8WWC4 291 aa17.75■□□□□ 0.43
CLN6-202ENST00000538696 MAGOHBQ96A72 148 aaKnown RBP17.75■□□□□ 0.43
CLN6-202ENST00000538696 C1orf74Q96LT6 269 aa17.75■□□□□ 0.43
CLN6-202ENST00000538696 DDX50Q9BQ39 737 aaKnown RBP17.75■□□□□ 0.43
CLN6-202ENST00000538696 EBF3Q9H4W6 596 aa17.75■□□□□ 0.43
CLN6-202ENST00000538696 DHX35Q9H5Z1 703 aaKnown RBP17.75■□□□□ 0.43
CLN6-202ENST00000538696 DMGDHQ9UI17 866 aaKnown RBP17.75■□□□□ 0.43
CLN6-202ENST00000538696 NEU3Q9UQ49 428 aa17.75■□□□□ 0.43
CLN6-202ENST00000538696 E9PAM4 449 aa17.74■□□□□ 0.43
CLN6-202ENST00000538696 F5H5T6 163 aa17.74■□□□□ 0.43
CLN6-202ENST00000538696 NARSO43776 548 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms