RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 PARNO95453 639 aaKnown RBP10.87□□□□□ -0.67
CLIP1-209ENST00000537178 ZNF24P17028 368 aa10.87□□□□□ -0.67
CLIP1-209ENST00000537178 TRIM32Q13049 653 aa10.87□□□□□ -0.67
CLIP1-209ENST00000537178 TRAF3Q13114 568 aa10.87□□□□□ -0.67
CLIP1-209ENST00000537178 ANGEL2Q5VTE6 544 aaKnown RBP10.87□□□□□ -0.67
CLIP1-209ENST00000537178 PAPD7Q5XG87 772 aaKnown RBP10.87□□□□□ -0.67
CLIP1-209ENST00000537178 ZNF280DQ6N043 979 aa10.87□□□□□ -0.67
CLIP1-209ENST00000537178 EXOC3L1Q86VI1 746 aa10.87□□□□□ -0.67
CLIP1-209ENST00000537178 ANKRD13AQ8IZ07 590 aa10.87□□□□□ -0.67
CLIP1-209ENST00000537178 MCOLN3Q8TDD5 553 aa10.87□□□□□ -0.67
CLIP1-209ENST00000537178 TAAR1Q96RJ0 339 aa10.87□□□□□ -0.67
CLIP1-209ENST00000537178 CDK5RAP1Q96SZ6 601 aaKnown RBP10.87□□□□□ -0.67
CLIP1-209ENST00000537178 C9orf16Q9BUW7 83 aa10.87□□□□□ -0.67
CLIP1-209ENST00000537178 NMRAL1Q9HBL8 299 aa10.87□□□□□ -0.67
CLIP1-209ENST00000537178 BTBD7Q9P203 1132 aa10.87□□□□□ -0.67
CLIP1-209ENST00000537178 L1RE1Q9UN81 338 aa10.87□□□□□ -0.67
CLIP1-209ENST00000537178 LRRC14BA6NHZ5 514 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 CBX4O00257 560 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 PIK3CDO00329 1044 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 MRASO14807 208 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 ENDOD1O94919 500 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 PLEKP08567 350 aaPredicted RBP10.86□□□□□ -0.67
CLIP1-209ENST00000537178 ME2P23368 584 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 CRABP2P29373 138 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 PIK3CGP48736 1102 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 SLC34A1Q06495 639 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 ATP1A4Q13733 1029 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 PTAR1Q7Z6K3 402 aaPredicted RBP10.86□□□□□ -0.67
CLIP1-209ENST00000537178 CAMKK1Q8N5S9 505 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 COLGALT1Q8NBJ5 622 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 RXFP2Q8WXD0 754 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 REPS1Q96D71 796 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 NLNQ9BYT8 704 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 A1CFQ9NQ94 594 aaKnown RBP10.86□□□□□ -0.67
CLIP1-209ENST00000537178 GGA3Q9NZ52 723 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 MKL2Q9ULH7 1088 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 SIK3Q9Y2K2 1263 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 A0A087WXM4 84 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 TSPAN19P0C672 248 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 AKAP5P24588 427 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 SCNN1BP51168 640 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 PSMD4P55036 377 aaKnown RBP10.86□□□□□ -0.67
CLIP1-209ENST00000537178 PMF1Q6P1K2 205 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 BRINP3Q76B58 766 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 OR56A4Q8NGH8 313 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 ATAD3AQ9NVI7 634 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 TAS2R13Q9NYV9 303 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 PRKAG3Q9UGI9 489 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 LIMD1Q9UGP4 676 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 CHKBQ9Y259 395 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 TIAM2Q8IVF5 1701 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 CCDC189A1A4V9 331 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 STAU1O95793 577 aaKnown RBP10.86□□□□□ -0.67
CLIP1-209ENST00000537178 MT-CO1P00395 513 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 ALOX12P18054 663 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 GPR15P49685 360 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 PTPN11Q06124 597 aaPredicted RBP10.86□□□□□ -0.67
CLIP1-209ENST00000537178 BST2Q10589 180 aaKnown RBP10.86□□□□□ -0.67
CLIP1-209ENST00000537178 NDUFAF6Q330K2 333 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 KLHL12Q53G59 568 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 FGD3Q5JSP0 725 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 SAMD4BQ5PRF9 694 aaKnown RBP10.86□□□□□ -0.67
CLIP1-209ENST00000537178 ZNF605Q86T29 641 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 FNDC5Q8NAU1 212 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 ASB2Q96Q27 587 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 THAP1Q9NVV9 213 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 SASH3O75995 380 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 EPHB3P54753 998 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 RHAGQ02094 409 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 BMPR2Q13873 1038 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 MYBPC2Q14324 1141 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 VPS72Q15906 364 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 FOXR1Q6PIV2 292 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 CLVS1Q8IUQ0 354 aaPredicted RBP10.86□□□□□ -0.67
CLIP1-209ENST00000537178 SAMD3Q8N6K7 520 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 METTL6Q8TCB7 284 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 NARS2Q96I59 477 aaKnown RBP10.86□□□□□ -0.67
CLIP1-209ENST00000537178 SLC25A23Q9BV35 468 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 RUSC1Q9BVN2 902 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 NRDE2Q9H7Z3 1164 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 ZFYVE1Q9HBF4 777 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 CYLDQ9NQC7 956 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 ZNF624Q9P2J8 865 aaPredicted RBP10.86□□□□□ -0.67
CLIP1-209ENST00000537178 GSTK1Q9Y2Q3 226 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 CAPN6Q9Y6Q1 641 aa10.86□□□□□ -0.67
CLIP1-209ENST00000537178 FCHO1O14526 889 aa10.85□□□□□ -0.67
CLIP1-209ENST00000537178 HS6ST1O60243 411 aa10.85□□□□□ -0.67
CLIP1-209ENST00000537178 THP07101 528 aa10.85□□□□□ -0.67
CLIP1-209ENST00000537178 ETS1P14921 441 aa10.85□□□□□ -0.67
CLIP1-209ENST00000537178 DNAJB2P25686 324 aa10.85□□□□□ -0.67
CLIP1-209ENST00000537178 CCR1P32246 355 aa10.85□□□□□ -0.67
CLIP1-209ENST00000537178 ANTXR2P58335 489 aa10.85□□□□□ -0.67
CLIP1-209ENST00000537178 FASTKQ14296 549 aaKnown RBP10.85□□□□□ -0.67
CLIP1-209ENST00000537178 N4BP2L1Q5TBK1 243 aaPredicted RBP10.85□□□□□ -0.67
CLIP1-209ENST00000537178 GRTP1Q5TC63 336 aa10.85□□□□□ -0.67
CLIP1-209ENST00000537178 ZDHHC13Q8IUH4 622 aa10.85□□□□□ -0.67
CLIP1-209ENST00000537178 PROX1Q92786 737 aa10.85□□□□□ -0.67
CLIP1-209ENST00000537178 RNF145Q96MT1 663 aa10.85□□□□□ -0.67
CLIP1-209ENST00000537178 PIF1Q9H611 641 aa10.85□□□□□ -0.67
CLIP1-209ENST00000537178 NOL6Q9H6R4 1146 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms