RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 TMPRSS4Q9NRS4 437 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 CNTN3Q9P232 1028 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 PCDHGC3Q9UN70 934 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 AFG3L2Q9Y4W6 797 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 RNF103-CHMP3A0A140T963 221 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 AKAP10O43572 662 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 FAM58BPP0C7Q3 252 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 ETFBP38117 255 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 TMEM259Q4ZIN3 620 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 MAP1SQ66K74 1059 aaPredicted RBP16.29■□□□□ 0.2
MCF2L-232ENST00000535094 B3GNT6Q6ZMB0 384 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 FLAD1Q8NFF5 587 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 FAM96AQ9H5X1 160 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 PDE4DIPQ5VU43 2346 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 PCNTO95613 3336 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 BIRC5O15392 142 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 PLA2G6O60733 806 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 HOXC6P09630 235 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 XRRA1Q6P2D8 792 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 C16orf89Q6UX73 402 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 SIGLEC10Q96LC7 697 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 DPP3Q9NY33 737 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 C2CD4BA6NLJ0 364 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 SPATA31C2B4DYI2 1134 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 KLF11O14901 512 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 TRIM13O60858 407 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 ALDOAP04075 364 aaKnown RBP16.28■□□□□ 0.2
MCF2L-232ENST00000535094 TSHRP16473 764 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 PIK3R1P27986 724 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 GP5P40197 560 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 RGS2P41220 211 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 GPD2P43304 727 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 THOP1P52888 689 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 SNX16P57768 344 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 IRF9Q00978 393 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 PTK2BQ14289 1009 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 TLR1Q15399 786 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 HSDL1Q3SXM5 330 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 KCTD21Q4G0X4 260 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 GJC2Q5T442 439 aaPredicted RBP16.28■□□□□ 0.2
MCF2L-232ENST00000535094 LENG1Q96BZ8 264 aaPredicted RBP16.28■□□□□ 0.2
MCF2L-232ENST00000535094 C2orf40Q9H1Z8 148 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 RUVBL2Q9Y230 463 aaKnown RBP16.28■□□□□ 0.2
MCF2L-232ENST00000535094 ADAMTSL1Q8N6G6 1762 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 ARHGEF37A1IGU5 675 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 SPDYE16A6NNV3 312 aaPredicted RBP16.28■□□□□ 0.2
MCF2L-232ENST00000535094 HCRTO43612 131 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 MSCO60682 206 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 ADARP55265 1226 aaKnown RBP16.28■□□□□ 0.2
MCF2L-232ENST00000535094 PDAP1Q13442 181 aaKnown RBP16.28■□□□□ 0.2
MCF2L-232ENST00000535094 DGKDQ16760 1214 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 TSHZ1Q6ZSZ6 1077 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 PQLC3Q8N755 202 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 WDR41Q9HAD4 459 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 LRRC4Q9HBW1 653 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 CPSF3Q9UKF6 684 aaKnown RBP16.28■□□□□ 0.2
MCF2L-232ENST00000535094 HES2Q9Y543 173 aa16.28■□□□□ 0.2
MCF2L-232ENST00000535094 GPR25O00155 361 aa16.27■□□□□ 0.2
MCF2L-232ENST00000535094 FGF3P11487 239 aaPredicted RBP16.27■□□□□ 0.2
MCF2L-232ENST00000535094 CCDC130P13994 396 aa16.27■□□□□ 0.2
MCF2L-232ENST00000535094 AOC1P19801 751 aa16.27■□□□□ 0.2
MCF2L-232ENST00000535094 RBP5P82980 135 aa16.27■□□□□ 0.2
MCF2L-232ENST00000535094 PLOD1Q02809 727 aaPredicted RBP16.27■□□□□ 0.2
MCF2L-232ENST00000535094 CMPK2Q5EBM0 449 aa16.27■□□□□ 0.2
MCF2L-232ENST00000535094 TRIM67Q6ZTA4 783 aa16.27■□□□□ 0.2
MCF2L-232ENST00000535094 PLD6Q8N2A8 252 aaKnown RBP16.27■□□□□ 0.2
MCF2L-232ENST00000535094 FNIP1Q8TF40 1166 aa16.27■□□□□ 0.2
MCF2L-232ENST00000535094 TMEM79Q9BSE2 394 aa16.27■□□□□ 0.2
MCF2L-232ENST00000535094 SLC4A5Q9BY07 1137 aa16.27■□□□□ 0.2
MCF2L-232ENST00000535094 SNX25Q9H3E2 840 aa16.27■□□□□ 0.2
MCF2L-232ENST00000535094 STK32BQ9NY57 414 aa16.27■□□□□ 0.2
MCF2L-232ENST00000535094 CCDC167Q9P0B6 97 aa16.27■□□□□ 0.2
MCF2L-232ENST00000535094 ZNF180Q9UJW8 692 aa16.27■□□□□ 0.2
MCF2L-232ENST00000535094 CDYLQ9Y232 598 aa16.27■□□□□ 0.2
MCF2L-232ENST00000535094 TK2O00142 265 aa16.27■□□□□ 0.2
MCF2L-232ENST00000535094 EEF1B2P24534 225 aaKnown RBP16.27■□□□□ 0.2
MCF2L-232ENST00000535094 MBLAC2Q68D91 279 aa16.27■□□□□ 0.2
MCF2L-232ENST00000535094 RWDD4Q6NW29 188 aaKnown RBP16.27■□□□□ 0.2
MCF2L-232ENST00000535094 DSELQ8IZU8 1212 aa16.27■□□□□ 0.2
MCF2L-232ENST00000535094 SIK2Q9H0K1 926 aa16.27■□□□□ 0.2
MCF2L-232ENST00000535094 NMRAL1Q9HBL8 299 aa16.27■□□□□ 0.2
MCF2L-232ENST00000535094 HOXC10Q9NYD6 342 aa16.27■□□□□ 0.2
MCF2L-232ENST00000535094 KLK14Q9P0G3 267 aa16.27■□□□□ 0.2
MCF2L-232ENST00000535094 BARX2Q9UMQ3 279 aaPredicted RBP16.27■□□□□ 0.2
MCF2L-232ENST00000535094 CNTNAP1P78357 1384 aa16.27■□□□□ 0.19
MCF2L-232ENST00000535094 SAC3D1A6NKF1 404 aa16.27■□□□□ 0.19
MCF2L-232ENST00000535094 GNL1P36915 607 aaPredicted RBP16.27■□□□□ 0.19
MCF2L-232ENST00000535094 ESRRGP62508 458 aa16.27■□□□□ 0.19
MCF2L-232ENST00000535094 RPS6KA2Q15349 733 aa16.27■□□□□ 0.19
MCF2L-232ENST00000535094 TMC7Q7Z402 723 aa16.27■□□□□ 0.19
MCF2L-232ENST00000535094 MICALL2Q8IY33 904 aa16.27■□□□□ 0.19
MCF2L-232ENST00000535094 ZNF786Q8N393 782 aa16.27■□□□□ 0.19
MCF2L-232ENST00000535094 MFSD3Q96ES6 412 aa16.27■□□□□ 0.19
MCF2L-232ENST00000535094 APBA2Q99767 749 aa16.27■□□□□ 0.19
MCF2L-232ENST00000535094 XYLT2Q9H1B5 865 aa16.27■□□□□ 0.19
MCF2L-232ENST00000535094 LHX5Q9H2C1 402 aa16.27■□□□□ 0.19
MCF2L-232ENST00000535094 TMEM165Q9HC07 324 aa16.27■□□□□ 0.19
MCF2L-232ENST00000535094 MAP3K20Q9NYL2 800 aaKnown RBP16.27■□□□□ 0.19
MCF2L-232ENST00000535094 ITGA11Q9UKX5 1188 aa16.27■□□□□ 0.19
MCF2L-232ENST00000535094 ZBTB14O43829 449 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms