RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 ARID5BQ14865 1188 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 E2F5Q15329 346 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 RAB6CQ53S08 254 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 FSCBQ5H9T9 825 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 RABGAP1LQ5R372 815 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 ARTNQ5T4W7 220 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 ACBD5Q5T8D3 534 aaPredicted RBP21.12■□□□□ 0.97
CCS-208ENST00000533244 PLEKHA7Q6IQ23 1121 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 SARM1Q6SZW1 724 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 CHST9Q7L1S5 443 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 ALYREFQ86V81 257 aaKnown RBP21.12■□□□□ 0.97
CCS-208ENST00000533244 VSTM4Q8IW00 320 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 CARNMT1Q8N4J0 409 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 MDGA1Q8NFP4 955 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 IGSF8Q969P0 613 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 C1orf74Q96LT6 269 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 RAB6CQ9H0N0 254 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 POLMQ9NP87 494 aaPredicted RBP21.12■□□□□ 0.97
CCS-208ENST00000533244 RIF1Q5UIP0 2472 aaKnown RBP21.12■□□□□ 0.97
CCS-208ENST00000533244 A0A1B0GVM2 712 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 TCAF2A6NFQ2 919 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 RTN2O75298 545 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 GPD1P21695 349 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 GGCXP38435 758 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 IL12RB1P42701 662 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 WASP42768 502 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 SRSF5Q13243 272 aaKnown RBP21.12■□□□□ 0.97
CCS-208ENST00000533244 CDH18Q13634 790 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 TRIM14Q14142 442 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 ZNF234Q14588 700 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 FUT11Q495W5 492 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 TDRD12Q587J7 1177 aaKnown RBP21.12■□□□□ 0.97
CCS-208ENST00000533244 SH3PXD2AQ5TCZ1 1133 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 C14orf80Q86SX3 495 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 FAM131BQ86XD5 332 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 CCAR2Q8N163 923 aaKnown RBP21.12■□□□□ 0.97
CCS-208ENST00000533244 GAB3Q8WWW8 586 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 SORCS1Q8WY21 1168 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 TTC17Q96AE7 1141 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 RPRD1AQ96P16 312 aaPredicted RBP21.12■□□□□ 0.97
CCS-208ENST00000533244 HAPLN3Q96S86 360 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 CIPCQ9C0C6 399 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 ISCUQ9H1K1 167 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 TMPRSS4Q9NRS4 437 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 INTS6Q9UL03 887 aaKnown RBP21.12■□□□□ 0.97
CCS-208ENST00000533244 VANGL2Q9ULK5 521 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 STON1Q9Y6Q2 735 aa21.12■□□□□ 0.97
CCS-208ENST00000533244 TMCO5BA8MYB1 307 aa21.11■□□□□ 0.97
CCS-208ENST00000533244 WASH3PC4AMC7 463 aa21.11■□□□□ 0.97
CCS-208ENST00000533244 GFRA3O60609 400 aa21.11■□□□□ 0.97
CCS-208ENST00000533244 ALDH1A2O94788 518 aa21.11■□□□□ 0.97
CCS-208ENST00000533244 IRAK1P51617 712 aa21.11■□□□□ 0.97
CCS-208ENST00000533244 ZNF143P52747 638 aaPredicted RBP21.11■□□□□ 0.97
CCS-208ENST00000533244 HDAC4P56524 1084 aa21.11■□□□□ 0.97
CCS-208ENST00000533244 RPL7AP62424 266 aaKnown RBP21.11■□□□□ 0.97
CCS-208ENST00000533244 MBLAC2Q68D91 279 aa21.11■□□□□ 0.97
CCS-208ENST00000533244 SDE2Q6IQ49 451 aa21.11■□□□□ 0.97
CCS-208ENST00000533244 ANO7Q6IWH7 933 aa21.11■□□□□ 0.97
CCS-208ENST00000533244 CIR1Q86X95 450 aaPredicted RBP21.11■□□□□ 0.97
CCS-208ENST00000533244 MCEEQ96PE7 176 aa21.11■□□□□ 0.97
CCS-208ENST00000533244 SMG5Q9UPR3 1016 aaKnown RBP21.11■□□□□ 0.97
CCS-208ENST00000533244 CKAP5Q14008 2032 aa21.1■□□□□ 0.97
CCS-208ENST00000533244 IGLV3-10A0A075B6K4 115 aa21.1■□□□□ 0.97
CCS-208ENST00000533244 TCRBV21S2A2A0A5A6 115 aa21.1■□□□□ 0.97
CCS-208ENST00000533244 H0Y626 953 aa21.1■□□□□ 0.97
CCS-208ENST00000533244 AP5Z1O43299 807 aa21.1■□□□□ 0.97
CCS-208ENST00000533244 FTLP02792 175 aaPredicted RBP21.1■□□□□ 0.97
CCS-208ENST00000533244 PLEKP08567 350 aaPredicted RBP21.1■□□□□ 0.97
CCS-208ENST00000533244 MAMLD1Q13495 774 aa21.1■□□□□ 0.97
CCS-208ENST00000533244 PTPRNQ16849 979 aa21.1■□□□□ 0.97
CCS-208ENST00000533244 CDO1Q16878 200 aa21.1■□□□□ 0.97
CCS-208ENST00000533244 CXorf57Q6NSI4 855 aaKnown RBP21.1■□□□□ 0.97
CCS-208ENST00000533244 KIAA1211LQ6NV74 962 aa21.1■□□□□ 0.97
CCS-208ENST00000533244 DNAAF5Q86Y56 855 aa21.1■□□□□ 0.97
CCS-208ENST00000533244 DRC7Q8IY82 874 aa21.1■□□□□ 0.97
CCS-208ENST00000533244 FAM172AQ8WUF8 416 aa21.1■□□□□ 0.97
CCS-208ENST00000533244 DNAJC7Q99615 494 aa21.1■□□□□ 0.97
CCS-208ENST00000533244 SIK2Q9H0K1 926 aa21.1■□□□□ 0.97
CCS-208ENST00000533244 KIAA1522Q9P206 1035 aaPredicted RBP21.1■□□□□ 0.97
CCS-208ENST00000533244 ARHGAP20Q9P2F6 1191 aa21.1■□□□□ 0.97
CCS-208ENST00000533244 ADAMTS1Q9UHI8 967 aa21.1■□□□□ 0.97
CCS-208ENST00000533244 SNX10Q9Y5X0 201 aa21.1■□□□□ 0.97
CCS-208ENST00000533244 FAM186AA6NE01 2351 aa21.09■□□□□ 0.97
CCS-208ENST00000533244 DRGXA6NNA5 263 aa21.09■□□□□ 0.97
CCS-208ENST00000533244 CCP110O43303 1012 aa21.09■□□□□ 0.97
CCS-208ENST00000533244 DLDP09622 509 aaKnown RBP21.09■□□□□ 0.97
CCS-208ENST00000533244 GABRG2P18507 467 aa21.09■□□□□ 0.97
CCS-208ENST00000533244 OGDHQ02218 1023 aa21.09■□□□□ 0.97
CCS-208ENST00000533244 SLC12A1Q13621 1099 aa21.09■□□□□ 0.97
CCS-208ENST00000533244 PITRM1Q5JRX3 1037 aa21.09■□□□□ 0.97
CCS-208ENST00000533244 CCDC117Q8IWD4 279 aaPredicted RBP21.09■□□□□ 0.97
CCS-208ENST00000533244 CNPY3Q9BT09 278 aa21.09■□□□□ 0.97
CCS-208ENST00000533244 TPSD1Q9BZJ3 242 aa21.09■□□□□ 0.97
CCS-208ENST00000533244 TMEM245Q9H330 911 aa21.09■□□□□ 0.97
CCS-208ENST00000533244 PARVAQ9NVD7 372 aa21.09■□□□□ 0.97
CCS-208ENST00000533244 RAD54BQ9Y620 910 aa21.09■□□□□ 0.97
CCS-208ENST00000533244 GVINP1Q7Z2Y8 2422 aa21.08■□□□□ 0.97
CCS-208ENST00000533244 WDR87Q6ZQQ6 2873 aa21.08■□□□□ 0.97
CCS-208ENST00000533244 ATMINO43313 823 aaPredicted RBP21.08■□□□□ 0.97
CCS-208ENST00000533244 CLDN11O75508 207 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms