RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 NUCB2P80303 420 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 DAB2P98082 770 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 PDE4CQ08493 712 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 ADIGQ0VDE8 80 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 ADAM9Q13443 819 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 SHBQ15464 509 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 CST6Q15828 149 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 ARHGAP40Q5TG30 622 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 RNF219Q5W0B1 726 aaPredicted RBP9.6□□□□□ -0.87
NEDD8-206ENST00000531430 MMS22LQ6ZRQ5 1243 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 USP30Q70CQ3 517 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 INTS8Q75QN2 995 aaKnown RBP9.6□□□□□ -0.87
NEDD8-206ENST00000531430 SND1Q7KZF4 910 aaKnown RBP eCLIP9.6□□□□□ -0.87
NEDD8-206ENST00000531430 PRPF39Q86UA1 669 aaKnown RBP9.6□□□□□ -0.87
NEDD8-206ENST00000531430 CFAP52Q8N1V2 620 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 OR2T34Q8NGX1 318 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 WFDC5Q8TCV5 224 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 CCDC47Q96A33 483 aaKnown RBP9.6□□□□□ -0.87
NEDD8-206ENST00000531430 ORAI3Q9BRQ5 295 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 BACH2Q9BYV9 841 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 NRSN2Q9GZP1 204 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 KCTD10Q9H3F6 313 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 ABCC13Q9NSE7 274 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 SCML1Q9UN30 329 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 PCDHA7Q9UN72 937 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 MORC2Q9Y6X9 1032 aaPredicted RBP9.6□□□□□ -0.87
NEDD8-206ENST00000531430 CKAP5Q14008 2032 aa9.6□□□□□ -0.87
NEDD8-206ENST00000531430 KALRNO60229 2985 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 TEX51A0A1B0GUA7 166 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 TYW5A2RUC4 315 aaKnown RBP9.59□□□□□ -0.87
NEDD8-206ENST00000531430 KLRC4O43908 158 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 ACSL4O60488 711 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 MOCS3O95396 460 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 YEATS4O95619 227 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 CKMT2P17540 419 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 RPL13P26373 211 aaKnown RBP9.59□□□□□ -0.87
NEDD8-206ENST00000531430 PSMC2P35998 433 aaKnown RBP9.59□□□□□ -0.87
NEDD8-206ENST00000531430 CTSOP43234 321 aaPredicted RBP9.59□□□□□ -0.87
NEDD8-206ENST00000531430 TBX4P57082 545 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 ZNF445P59923 1031 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 KCNH2Q12809 1159 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 LRMPQ12912 555 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 KCNJ12Q14500 433 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 STAT4Q14765 748 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 RTP5Q14D33 572 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 POM121L1PQ3SYA9 428 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 HS1BP3Q53T59 392 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 SGO2Q562F6 1265 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 RAB41Q5JT25 222 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 PIK3R6Q5UE93 754 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 BROXQ5VW32 411 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 KRT39Q6A163 491 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 PM20D1Q6GTS8 502 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 FBXL19Q6PCT2 694 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 TMC6Q7Z403 805 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 UNC45BQ8IWX7 931 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 FAM217AQ8IXS0 508 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 STK40Q8N2I9 435 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 TTC39CQ8N584 583 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 SEMA4DQ92854 862 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 EEF2KMTQ96G04 330 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 RPL10LQ96L21 214 aaKnown RBP9.59□□□□□ -0.87
NEDD8-206ENST00000531430 TMEM8AQ9HCN3 771 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 RAB20Q9NX57 234 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 SLCO3A1Q9UIG8 710 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 TSPAN16Q9UKR8 245 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 ERVW-1Q9UQF0 538 aa9.59□□□□□ -0.87
NEDD8-206ENST00000531430 A0A1B0GVL5 298 aa9.58□□□□□ -0.88
NEDD8-206ENST00000531430 XPO1O14980 1071 aaKnown RBP9.58□□□□□ -0.88
NEDD8-206ENST00000531430 YKT6O15498 198 aa9.58□□□□□ -0.88
NEDD8-206ENST00000531430 PAPSS1O43252 624 aaPredicted RBP9.58□□□□□ -0.88
NEDD8-206ENST00000531430 BNIP3LO60238 219 aa9.58□□□□□ -0.88
NEDD8-206ENST00000531430 MOCS2O96007 188 aaPredicted RBP9.58□□□□□ -0.88
NEDD8-206ENST00000531430 MT-CO3P00414 261 aa9.58□□□□□ -0.88
NEDD8-206ENST00000531430 ASLP04424 464 aa9.58□□□□□ -0.88
NEDD8-206ENST00000531430 MPOP05164 745 aa9.58□□□□□ -0.88
NEDD8-206ENST00000531430 KRT10P13645 584 aa9.58□□□□□ -0.88
NEDD8-206ENST00000531430 ZNF18P17022 549 aa9.58□□□□□ -0.88
NEDD8-206ENST00000531430 GOT1P17174 413 aa9.58□□□□□ -0.88
NEDD8-206ENST00000531430 EPHA8P29322 1005 aaPredicted RBP9.58□□□□□ -0.88
NEDD8-206ENST00000531430 SLC6A4P31645 630 aa9.58□□□□□ -0.88
NEDD8-206ENST00000531430 NNMTP40261 264 aa9.58□□□□□ -0.88
NEDD8-206ENST00000531430 NXPH1P58417 271 aa9.58□□□□□ -0.88
NEDD8-206ENST00000531430 RPS24P62847 133 aaKnown RBP9.58□□□□□ -0.88
NEDD8-206ENST00000531430 CDH18Q13634 790 aa9.58□□□□□ -0.88
NEDD8-206ENST00000531430 HNRNPA1L2Q32P51 320 aaKnown RBP9.58□□□□□ -0.88
NEDD8-206ENST00000531430 ACCSLQ4AC99 568 aa9.58□□□□□ -0.88
NEDD8-206ENST00000531430 C9orf64Q5T6V5 341 aa9.58□□□□□ -0.88
NEDD8-206ENST00000531430 TCERG1LQ5VWI1 586 aa9.58□□□□□ -0.88
NEDD8-206ENST00000531430 RESP18Q5W5W9 173 aa9.58□□□□□ -0.88
NEDD8-206ENST00000531430 ARHGAP17Q68EM7 881 aa9.58□□□□□ -0.88
NEDD8-206ENST00000531430 KIAA0907Q7Z7F0 614 aaPredicted RBP9.58□□□□□ -0.88
NEDD8-206ENST00000531430 SPACA3Q8IXA5 215 aa9.58□□□□□ -0.88
NEDD8-206ENST00000531430 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.58□□□□□ -0.88
NEDD8-206ENST00000531430 LSM14AQ8ND56 463 aaKnown RBP9.58□□□□□ -0.88
NEDD8-206ENST00000531430 FIBINQ8TAL6 211 aa9.58□□□□□ -0.88
NEDD8-206ENST00000531430 TSC1Q92574 1164 aa9.58□□□□□ -0.88
NEDD8-206ENST00000531430 TTC17Q96AE7 1141 aa9.58□□□□□ -0.88
NEDD8-206ENST00000531430 DDX50Q9BQ39 737 aaKnown RBP9.58□□□□□ -0.88
NEDD8-206ENST00000531430 MIS12Q9H081 205 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms