RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 NPC1O15118 1278 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 LUC7L3O95232 432 aaKnown RBP13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 PLEKP08567 350 aaPredicted RBP13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 CD70P32970 193 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 PXNP49023 591 aaPredicted RBP13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 ZNF143P52747 638 aaPredicted RBP13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 MAMLD1Q13495 774 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 ENPP2Q13822 863 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 ARID5BQ14865 1188 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 E2F5Q15329 346 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 CDO1Q16878 200 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 FSCBQ5H9T9 825 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 RABGAP1LQ5R372 815 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 TTC39BQ5VTQ0 682 aaPredicted RBP13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 SDE2Q6IQ49 451 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 DCUN1D2Q6PH85 259 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 CHST9Q7L1S5 443 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 VPS36Q86VN1 386 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 FAM131BQ86XD5 332 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 CCDC117Q8IWD4 279 aaPredicted RBP13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 ZNF683Q8IZ20 524 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 CHPFQ8IZ52 775 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 AHI1Q8N157 1196 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 TSTD1Q8NFU3 115 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 NKD2Q969F2 451 aaPredicted RBP13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 RPRD1AQ96P16 312 aaPredicted RBP13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 MCEEQ96PE7 176 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 DNAJC7Q99615 494 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 GABRG3Q99928 467 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 TRIM5Q9C035 493 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 CIPCQ9C0C6 399 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 SIK2Q9H0K1 926 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 TMPRSS4Q9NRS4 437 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 ARHGAP20Q9P2F6 1191 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 VANGL2Q9ULK5 521 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 SNX10Q9Y5X0 201 aa13.09□□□□□ -0.31
CCDC90B-216ENST00000529856 VPS13AQ96RL7 3174 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 A0A087X0T9 212 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 A0A1B0GVM2 712 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 A0A1W2PQF6 199 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 ANKRD62A6NC57 917 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 TCAF2A6NFQ2 919 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 WASH3PC4AMC7 463 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 H0Y626 953 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 HRO43593 1189 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 TPM1P09493 284 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 FAM228BP0C875 321 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 CNR2P34972 360 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 ADRA1BP35368 520 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 GGCXP38435 758 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 WASP42768 502 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 HDAC4P56524 1084 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 LMAN2Q12907 356 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 TBX2Q13207 712 aaPredicted RBP13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 CDH18Q13634 790 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 ARTNQ5T4W7 220 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 MBLAC2Q68D91 279 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 RASSF3Q86WH2 238 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 CCAR2Q8N163 923 aaKnown RBP13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 FAM172AQ8WUF8 416 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 SORCS1Q8WY21 1168 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 TTC17Q96AE7 1141 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 TRIM11Q96F44 468 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 CNPY3Q9BT09 278 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 POLMQ9NP87 494 aaPredicted RBP13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 CACNA2D2Q9NY47 1150 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 KIAA1522Q9P206 1035 aaPredicted RBP13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 CNOT8Q9UFF9 292 aaKnown RBP13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 INTS6Q9UL03 887 aaKnown RBP13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 STON1Q9Y6Q2 735 aa13.08□□□□□ -0.32
CCDC90B-216ENST00000529856 TMEM191CA6NGB0 347 aa13.07□□□□□ -0.32
CCDC90B-216ENST00000529856 DRGXA6NNA5 263 aa13.07□□□□□ -0.32
CCDC90B-216ENST00000529856 AXIN1O15169 862 aa13.07□□□□□ -0.32
CCDC90B-216ENST00000529856 CCP110O43303 1012 aa13.07□□□□□ -0.32
CCDC90B-216ENST00000529856 ATMINO43313 823 aaPredicted RBP13.07□□□□□ -0.32
CCDC90B-216ENST00000529856 ALDH1A2O94788 518 aa13.07□□□□□ -0.32
CCDC90B-216ENST00000529856 MYBL1P10243 752 aa13.07□□□□□ -0.32
CCDC90B-216ENST00000529856 HOXB2P14652 356 aa13.07□□□□□ -0.32
CCDC90B-216ENST00000529856 POLR2EP19388 210 aaKnown RBP13.07□□□□□ -0.32
CCDC90B-216ENST00000529856 EIF4A3P38919 411 aaKnown RBP13.07□□□□□ -0.32
CCDC90B-216ENST00000529856 IL12RB1P42701 662 aa13.07□□□□□ -0.32
CCDC90B-216ENST00000529856 IRAK1P51617 712 aa13.07□□□□□ -0.32
CCDC90B-216ENST00000529856 OGDHQ02218 1023 aa13.07□□□□□ -0.32
CCDC90B-216ENST00000529856 SLC12A1Q13621 1099 aa13.07□□□□□ -0.32
CCDC90B-216ENST00000529856 ZNF234Q14588 700 aa13.07□□□□□ -0.32
CCDC90B-216ENST00000529856 ARL13BQ3SXY8 428 aa13.07□□□□□ -0.32
CCDC90B-216ENST00000529856 KIAA1211LQ6NV74 962 aa13.07□□□□□ -0.32
CCDC90B-216ENST00000529856 LRRC31Q6UY01 552 aa13.07□□□□□ -0.32
CCDC90B-216ENST00000529856 CIR1Q86X95 450 aaPredicted RBP13.07□□□□□ -0.32
CCDC90B-216ENST00000529856 SUMF1Q8NBK3 374 aa13.07□□□□□ -0.32
CCDC90B-216ENST00000529856 ZNF653Q96CK0 615 aa13.07□□□□□ -0.32
CCDC90B-216ENST00000529856 OSBPL2Q9H1P3 480 aa13.07□□□□□ -0.32
CCDC90B-216ENST00000529856 EPC1Q9H2F5 836 aa13.07□□□□□ -0.32
CCDC90B-216ENST00000529856 CD248Q9HCU0 757 aa13.07□□□□□ -0.32
CCDC90B-216ENST00000529856 PLA2G4CQ9UP65 541 aa13.07□□□□□ -0.32
CCDC90B-216ENST00000529856 IGLV3-10A0A075B6K4 115 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 TCRBV21S2A2A0A5A6 115 aa13.06□□□□□ -0.32
CCDC90B-216ENST00000529856 PRR23AA6NEV1 266 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms