RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 CD274Q9NZQ7 290 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 CNTN3Q9P232 1028 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 CACNA1SQ13698 1873 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 VPS26AO75436 327 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 LUC7L3O95232 432 aaKnown RBP15.44■□□□□ 0.06
USP47-207ENST00000527733 ZNF865P0CJ78 1059 aaPredicted RBP15.44■□□□□ 0.06
USP47-207ENST00000527733 TPGS1Q6ZTW0 290 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 SNX19Q92543 992 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 AJAP1Q9UKB5 411 aaPredicted RBP15.44■□□□□ 0.06
USP47-207ENST00000527733 A0A1W2PQ45 241 aaPredicted RBP15.43■□□□□ 0.06
USP47-207ENST00000527733 A0A1W2PQY0 241 aa15.43■□□□□ 0.06
USP47-207ENST00000527733 KCNE1P15382 129 aa15.43■□□□□ 0.06
USP47-207ENST00000527733 HMOX2P30519 316 aa15.43■□□□□ 0.06
USP47-207ENST00000527733 SSTR1P30872 391 aa15.43■□□□□ 0.06
USP47-207ENST00000527733 RPL22P35268 128 aaKnown RBP15.43■□□□□ 0.06
USP47-207ENST00000527733 CES5AQ6NT32 575 aa15.43■□□□□ 0.06
USP47-207ENST00000527733 MDM1Q8TC05 714 aa15.43■□□□□ 0.06
USP47-207ENST00000527733 FAM111AQ96PZ2 611 aa15.43■□□□□ 0.06
USP47-207ENST00000527733 NINJ2Q9NZG7 142 aa15.43■□□□□ 0.06
USP47-207ENST00000527733 DCDC2Q9UHG0 476 aa15.43■□□□□ 0.06
USP47-207ENST00000527733 HEATR9A2RTY3 570 aa15.43■□□□□ 0.06
USP47-207ENST00000527733 SUPT3HB4E1H0 165 aa15.43■□□□□ 0.06
USP47-207ENST00000527733 SUPT3HO75486 399 aa15.43■□□□□ 0.06
USP47-207ENST00000527733 TMCC1O94876 653 aa15.43■□□□□ 0.06
USP47-207ENST00000527733 IGSF6O95976 241 aa15.43■□□□□ 0.06
USP47-207ENST00000527733 SLC8A1P32418 973 aa15.43■□□□□ 0.06
USP47-207ENST00000527733 TBCCQ15814 346 aa15.43■□□□□ 0.06
USP47-207ENST00000527733 ZNF284Q2VY69 593 aa15.43■□□□□ 0.06
USP47-207ENST00000527733 CTU1Q7Z7A3 348 aaKnown RBP15.43■□□□□ 0.06
USP47-207ENST00000527733 ZC3H3Q8IXZ2 948 aaKnown RBP15.43■□□□□ 0.06
USP47-207ENST00000527733 SDCCAG3Q96C92 435 aa15.43■□□□□ 0.06
USP47-207ENST00000527733 C11orf49Q9H6J7 331 aa15.43■□□□□ 0.06
USP47-207ENST00000527733 CHADO15335 359 aa15.43■□□□□ 0.06
USP47-207ENST00000527733 UNGP13051 313 aaPredicted RBP15.43■□□□□ 0.06
USP47-207ENST00000527733 PTPN9P43378 593 aa15.43■□□□□ 0.06
USP47-207ENST00000527733 IRAK1P51617 712 aa15.43■□□□□ 0.06
USP47-207ENST00000527733 PSTKQ8IV42 348 aaKnown RBP15.43■□□□□ 0.06
USP47-207ENST00000527733 PLEKHO2Q8TD55 490 aa15.43■□□□□ 0.06
USP47-207ENST00000527733 PPWD1Q96BP3 646 aaKnown RBP15.43■□□□□ 0.06
USP47-207ENST00000527733 CLPBQ9H078 707 aa15.43■□□□□ 0.06
USP47-207ENST00000527733 A0A1W2PQH9 124 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 GSTA4O15217 222 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 COL6A1P12109 1028 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 PGAM1P18669 254 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 GABRR2P28476 465 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 HADHAP40939 763 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 KDM7AQ6ZMT4 941 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 SPATA24Q86W54 205 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 MANSC1Q9H8J5 431 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 ETNK1Q9HBU6 452 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 MARCOQ9UEW3 520 aaPredicted RBP15.42■□□□□ 0.06
USP47-207ENST00000527733 SALL4Q9UJQ4 1053 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 USP15Q9Y4E8 981 aaPredicted RBP15.42■□□□□ 0.06
USP47-207ENST00000527733 USP12O75317 370 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 MYO1DO94832 1006 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 CDC25CP30307 473 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 LRRC57Q8N9N7 239 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 RCOR3Q9P2K3 495 aaPredicted RBP15.42■□□□□ 0.06
USP47-207ENST00000527733 USH1CQ9Y6N9 552 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 WDR27A2RRH5 827 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 KIF3CO14782 793 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 SYNCRIPO60506 623 aaKnown RBP15.42■□□□□ 0.06
USP47-207ENST00000527733 CLTBP09497 229 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 FAM163BP0C2L3 166 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 ETS1P14921 441 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 HNRNPH2P55795 449 aaKnown RBP15.42■□□□□ 0.06
USP47-207ENST00000527733 DMTNQ08495 405 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 SNCBQ16143 134 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 B3GNT9Q6UX72 402 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 PXYLP1Q8TE99 480 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 SGF29Q96ES7 293 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 TBL1YQ9BQ87 522 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 UNC93B1Q9H1C4 597 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 NPHS2Q9NP85 383 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 PIH1D1Q9NWS0 290 aaKnown RBP15.42■□□□□ 0.06
USP47-207ENST00000527733 ACOT9Q9Y305 439 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 PDE4DIPQ5VU43 2346 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 DDX3YO15523 660 aaKnown RBP15.42■□□□□ 0.06
USP47-207ENST00000527733 MTA2O94776 668 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 ESRRBO95718 433 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 ATP5BP06576 529 aaKnown RBP15.42■□□□□ 0.06
USP47-207ENST00000527733 PSMB4P28070 264 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 GP5P40197 560 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 HADHBP55084 474 aaKnown RBP15.42■□□□□ 0.06
USP47-207ENST00000527733 PLPP4Q5VZY2 271 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 GMIPQ9P107 970 aa15.42■□□□□ 0.06
USP47-207ENST00000527733 SCAMP3O14828 347 aaKnown RBP15.41■□□□□ 0.06
USP47-207ENST00000527733 PAGE1O75459 146 aa15.41■□□□□ 0.06
USP47-207ENST00000527733 CCNB1P14635 433 aa15.41■□□□□ 0.06
USP47-207ENST00000527733 ASTE1Q2TB18 679 aaPredicted RBP15.41■□□□□ 0.06
USP47-207ENST00000527733 MORN1Q5T089 497 aa15.41■□□□□ 0.06
USP47-207ENST00000527733 TAS1R3Q7RTX0 852 aa15.41■□□□□ 0.06
USP47-207ENST00000527733 PTAR1Q7Z6K3 402 aaPredicted RBP15.41■□□□□ 0.06
USP47-207ENST00000527733 RASGEF1CQ8N431 466 aa15.41■□□□□ 0.06
USP47-207ENST00000527733 DQX1Q8TE96 717 aaKnown RBP15.41■□□□□ 0.06
USP47-207ENST00000527733 ZNF473Q8WTR7 871 aaKnown RBP15.41■□□□□ 0.06
USP47-207ENST00000527733 NDRG1Q92597 394 aaKnown RBP15.41■□□□□ 0.06
USP47-207ENST00000527733 FUBP3Q96I24 572 aaKnown RBP eCLIP15.41■□□□□ 0.06
USP47-207ENST00000527733 IGKV6-21A0A0C4DH24 114 aa15.41■□□□□ 0.06
USP47-207ENST00000527733 SOAT2O75908 522 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms