RNA–Protein interactions for RNA: ENST00000521678.1

IGHV3-60-201, Transcript of immunoglobulin heavy variable 3-60 (pseudogene), humanhuman

BASIC

Gene IGHV3-60, Length 354 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-60-201ENST00000521678 RNF139Q8WU17 664 aa11.96□□□□□ -0.49
IGHV3-60-201ENST00000521678 EDEM1Q92611 657 aa11.96□□□□□ -0.49
IGHV3-60-201ENST00000521678 SKA1Q96BD8 255 aa11.96□□□□□ -0.49
IGHV3-60-201ENST00000521678 CNDP2Q96KP4 475 aaKnown RBP11.96□□□□□ -0.49
IGHV3-60-201ENST00000521678 SLC6A18Q96N87 628 aa11.96□□□□□ -0.49
IGHV3-60-201ENST00000521678 DCBLD2Q96PD2 775 aa11.96□□□□□ -0.49
IGHV3-60-201ENST00000521678 FAM129BQ96TA1 746 aa11.96□□□□□ -0.49
IGHV3-60-201ENST00000521678 LRRC4Q9HBW1 653 aa11.96□□□□□ -0.49
IGHV3-60-201ENST00000521678 CNGB3Q9NQW8 809 aa11.96□□□□□ -0.49
IGHV3-60-201ENST00000521678 KIAA1257Q9ULG3 409 aa11.96□□□□□ -0.49
IGHV3-60-201ENST00000521678 FZD4Q9ULV1 537 aa11.96□□□□□ -0.49
IGHV3-60-201ENST00000521678 HPSEQ9Y251 543 aa11.96□□□□□ -0.49
IGHV3-60-201ENST00000521678 COQ4Q9Y3A0 265 aa11.96□□□□□ -0.49
IGHV3-60-201ENST00000521678 GOLGA6L7A0A1B0GV03 622 aa11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 LRRC72A6NJI9 287 aa11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 TLR4O00206 839 aa11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 CBX4O00257 560 aa11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 YKT6O15498 198 aa11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 ACSL4O60488 711 aa11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 TBL1XO60907 577 aa11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 RFPL3O75679 317 aa11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 ASLP04424 464 aa11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 ITGAVP06756 1048 aa11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 ZSCAN22P10073 491 aaPredicted RBP11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 SLC6A4P31645 630 aa11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 HNF1BP35680 557 aa11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 CLDN6P56747 220 aa11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 DAOAP59103 153 aa11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 SEMG2Q02383 582 aa11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 ADIGQ0VDE8 80 aa11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 BST2Q10589 180 aaKnown RBP11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 ILKQ13418 452 aa11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 CST6Q15828 149 aa11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 C6orf118Q5T5N4 469 aa11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 SFMBT2Q5VUG0 894 aa11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 RFWD3Q6PCD5 774 aa11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 UNC45BQ8IWX7 931 aa11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 SLC35F5Q8WV83 523 aa11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 RFFLQ8WZ73 363 aa11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 IPO9Q96P70 1041 aaKnown RBP11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 TSPAN16Q9UKR8 245 aa11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 CFAP45Q9UL16 551 aa11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 TPX2Q9ULW0 747 aaKnown RBP11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 COL5A1P20908 1838 aaPredicted RBP11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 MUC22E2RYF6 1773 aaPredicted RBP11.95□□□□□ -0.5
IGHV3-60-201ENST00000521678 FAM237AA0A1B0GTK4 181 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 O00370 1275 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 MID1O15344 667 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 MSI1O43347 362 aaKnown RBP11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 LATO43561 262 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 RNASEH1O60930 286 aaKnown RBP11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 F13A1P00488 732 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 ABCB4P21439 1286 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 EPHA8P29322 1005 aaPredicted RBP11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 SLC8A1P32418 973 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 CSKP41240 450 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 SLC11A2P49281 568 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 NXPH1P58417 271 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 GOLGA7BQ2TAP0 167 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 FOXD4L6Q3SYB3 417 aaPredicted RBP11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 SGO2Q562F6 1265 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 NUGGCQ68CJ6 796 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 NADSYN1Q6IA69 706 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 FOXD4L3Q6VB84 417 aaPredicted RBP11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 LRRC69Q6ZNQ3 347 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 EID2Q8N6I1 236 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 UBR7Q8N806 425 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 UBA3Q8TBC4 463 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 GANCQ8TET4 914 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 IRGQQ8WZA9 623 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 FGF11Q92914 225 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 FAM131CQ96AQ9 280 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 MYEOVQ96EZ4 313 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 EEF2KMTQ96G04 330 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 MMRN2Q9H8L6 949 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 GDF3Q9NR23 364 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 HESX1Q9UBX0 185 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 MAPK8IP1Q9UQF2 711 aa11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 ARID1BQ8NFD5 2236 aaPredicted RBP11.94□□□□□ -0.5
IGHV3-60-201ENST00000521678 ITIH6Q6UXX5 1313 aa11.93□□□□□ -0.5
IGHV3-60-201ENST00000521678 A0A1B0GVL5 298 aa11.93□□□□□ -0.5
IGHV3-60-201ENST00000521678 A0A1W2PP55 124 aa11.93□□□□□ -0.5
IGHV3-60-201ENST00000521678 FAM47DPA6NHR8 397 aa11.93□□□□□ -0.5
IGHV3-60-201ENST00000521678 RRP8O43159 456 aaKnown RBP11.93□□□□□ -0.5
IGHV3-60-201ENST00000521678 STX10O60499 249 aa11.93□□□□□ -0.5
IGHV3-60-201ENST00000521678 FYNP06241 537 aa11.93□□□□□ -0.5
IGHV3-60-201ENST00000521678 SRPRAP08240 638 aaKnown RBP11.93□□□□□ -0.5
IGHV3-60-201ENST00000521678 SETSIPP0DME0 302 aa11.93□□□□□ -0.5
IGHV3-60-201ENST00000521678 VDRP11473 427 aa11.93□□□□□ -0.5
IGHV3-60-201ENST00000521678 PFKFB1P16118 471 aa11.93□□□□□ -0.5
IGHV3-60-201ENST00000521678 GOT1P17174 413 aa11.93□□□□□ -0.5
IGHV3-60-201ENST00000521678 CKMT2P17540 419 aa11.93□□□□□ -0.5
IGHV3-60-201ENST00000521678 ARRB1P49407 418 aaPredicted RBP11.93□□□□□ -0.5
IGHV3-60-201ENST00000521678 MXI1P50539 228 aa11.93□□□□□ -0.5
IGHV3-60-201ENST00000521678 ST8SIA6P61647 398 aa11.93□□□□□ -0.5
IGHV3-60-201ENST00000521678 RPS24P62847 133 aaKnown RBP11.93□□□□□ -0.5
IGHV3-60-201ENST00000521678 DPYDQ12882 1025 aa11.93□□□□□ -0.5
IGHV3-60-201ENST00000521678 BNIP3Q12983 259 aa11.93□□□□□ -0.5
IGHV3-60-201ENST00000521678 CUL2Q13617 745 aa11.93□□□□□ -0.5
IGHV3-60-201ENST00000521678 EDRF1Q3B7T1 1238 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms