RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 BROXQ5VW32 411 aa11.95□□□□□ -0.5
MRPS28-206ENST00000520946 TCERG1LQ5VWI1 586 aa11.95□□□□□ -0.5
MRPS28-206ENST00000520946 TBC1D3GQ6DHY5 549 aa11.95□□□□□ -0.5
MRPS28-206ENST00000520946 PM20D1Q6GTS8 502 aa11.95□□□□□ -0.5
MRPS28-206ENST00000520946 TBC1D3CQ6IPX1 549 aa11.95□□□□□ -0.5
MRPS28-206ENST00000520946 SND1Q7KZF4 910 aaKnown RBP eCLIP11.95□□□□□ -0.53e-8■■■■■ 30.4
MRPS28-206ENST00000520946 PRPF39Q86UA1 669 aaKnown RBP11.95□□□□□ -0.5
MRPS28-206ENST00000520946 TBC1D3Q8IZP1 549 aaPredicted RBP11.95□□□□□ -0.5
MRPS28-206ENST00000520946 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.95□□□□□ -0.5
MRPS28-206ENST00000520946 HJURPQ8NCD3 748 aaPredicted RBP11.95□□□□□ -0.5
MRPS28-206ENST00000520946 UBA3Q8TBC4 463 aa11.95□□□□□ -0.5
MRPS28-206ENST00000520946 FGF11Q92914 225 aa11.95□□□□□ -0.5
MRPS28-206ENST00000520946 MTG2Q9H4K7 406 aa11.95□□□□□ -0.5
MRPS28-206ENST00000520946 RAB20Q9NX57 234 aa11.95□□□□□ -0.5
MRPS28-206ENST00000520946 TSPAN16Q9UKR8 245 aa11.95□□□□□ -0.5
MRPS28-206ENST00000520946 TPX2Q9ULW0 747 aaKnown RBP11.95□□□□□ -0.5
MRPS28-206ENST00000520946 TRAF3IP3Q9Y228 551 aa11.95□□□□□ -0.5
MRPS28-206ENST00000520946 SHROOM3Q8TF72 1996 aa11.95□□□□□ -0.5
MRPS28-206ENST00000520946 TEX51A0A1B0GUA7 166 aa11.94□□□□□ -0.5
MRPS28-206ENST00000520946 GOLGA6L7A0A1B0GV03 622 aa11.94□□□□□ -0.5
MRPS28-206ENST00000520946 TLR4O00206 839 aa11.94□□□□□ -0.5
MRPS28-206ENST00000520946 SIN3BO75182 1162 aa11.94□□□□□ -0.5
MRPS28-206ENST00000520946 GLDCP23378 1020 aa11.94□□□□□ -0.5
MRPS28-206ENST00000520946 CSKP41240 450 aa11.94□□□□□ -0.5
MRPS28-206ENST00000520946 TBX4P57082 545 aa11.94□□□□□ -0.5
MRPS28-206ENST00000520946 CXADRP78310 365 aa11.94□□□□□ -0.5
MRPS28-206ENST00000520946 DAB2P98082 770 aa11.94□□□□□ -0.5
MRPS28-206ENST00000520946 CCDC173Q0VFZ6 552 aa11.94□□□□□ -0.5
MRPS28-206ENST00000520946 ILKQ13418 452 aa11.94□□□□□ -0.5
MRPS28-206ENST00000520946 HNRNPA1L2Q32P51 320 aaKnown RBP11.94□□□□□ -0.5
MRPS28-206ENST00000520946 PIK3R6Q5UE93 754 aa11.94□□□□□ -0.5
MRPS28-206ENST00000520946 ATL3Q6DD88 541 aa11.94□□□□□ -0.5
MRPS28-206ENST00000520946 LSM14AQ8ND56 463 aaKnown RBP11.94□□□□□ -0.5
MRPS28-206ENST00000520946 SAP25Q8TEE9 199 aa11.94□□□□□ -0.5
MRPS28-206ENST00000520946 TATDN2Q93075 761 aa11.94□□□□□ -0.5
MRPS28-206ENST00000520946 LGMNQ99538 433 aa11.94□□□□□ -0.5
MRPS28-206ENST00000520946 IRX2Q9BZI1 471 aaPredicted RBP11.94□□□□□ -0.5
MRPS28-206ENST00000520946 PRORYQ9H606 182 aa11.94□□□□□ -0.5
MRPS28-206ENST00000520946 CNGB3Q9NQW8 809 aa11.94□□□□□ -0.5
MRPS28-206ENST00000520946 STOML2Q9UJZ1 356 aa11.94□□□□□ -0.5
MRPS28-206ENST00000520946 FZD4Q9ULV1 537 aa11.94□□□□□ -0.5
MRPS28-206ENST00000520946 CLCA2Q9UQC9 943 aa11.94□□□□□ -0.5
MRPS28-206ENST00000520946 RAI2Q9Y5P3 530 aa11.94□□□□□ -0.5
MRPS28-206ENST00000520946 TMEM131Q92545 1883 aa11.93□□□□□ -0.5
MRPS28-206ENST00000520946 EDDM13A0A1B0GTR0 161 aa11.93□□□□□ -0.5
MRPS28-206ENST00000520946 TARSL2A2RTX5 802 aaKnown RBP11.93□□□□□ -0.5
MRPS28-206ENST00000520946 YJEFN3A6XGL0 299 aa11.93□□□□□ -0.5
MRPS28-206ENST00000520946 E7ENQ6 273 aa11.93□□□□□ -0.5
MRPS28-206ENST00000520946 CETN3O15182 167 aa11.93□□□□□ -0.5
MRPS28-206ENST00000520946 ACTN4O43707 911 aaKnown RBP11.93□□□□□ -0.5
MRPS28-206ENST00000520946 ACSL4O60488 711 aa11.93□□□□□ -0.5
MRPS28-206ENST00000520946 ADH1BP00325 375 aa11.93□□□□□ -0.5
MRPS28-206ENST00000520946 IL1BP01584 269 aa11.93□□□□□ -0.5
MRPS28-206ENST00000520946 SETSIPP0DME0 302 aa11.93□□□□□ -0.5
MRPS28-206ENST00000520946 GOT1P17174 413 aa11.93□□□□□ -0.5
MRPS28-206ENST00000520946 CKMT2P17540 419 aa11.93□□□□□ -0.5
MRPS28-206ENST00000520946 C5AR1P21730 350 aa11.93□□□□□ -0.5
MRPS28-206ENST00000520946 ACADVLP49748 655 aa11.93□□□□□ -0.5
MRPS28-206ENST00000520946 CCR5P51681 352 aa11.93□□□□□ -0.5
MRPS28-206ENST00000520946 E2F1Q01094 437 aa11.93□□□□□ -0.5
MRPS28-206ENST00000520946 ENPEPQ07075 957 aa11.93□□□□□ -0.5
MRPS28-206ENST00000520946 STAT4Q14765 748 aa11.93□□□□□ -0.5
MRPS28-206ENST00000520946 DCAF17Q5H9S7 520 aaPredicted RBP11.93□□□□□ -0.5
MRPS28-206ENST00000520946 KIAA0907Q7Z7F0 614 aaPredicted RBP11.93□□□□□ -0.5
MRPS28-206ENST00000520946 FIBINQ8TAL6 211 aa11.93□□□□□ -0.5
MRPS28-206ENST00000520946 CCDC34Q96HJ3 373 aa11.93□□□□□ -0.5
MRPS28-206ENST00000520946 ERVW-1Q9UQF0 538 aa11.93□□□□□ -0.5
MRPS28-206ENST00000520946 A0A1B0GVL5 298 aa11.92□□□□□ -0.5
MRPS28-206ENST00000520946 TTC34A8MYJ7 566 aa11.92□□□□□ -0.5
MRPS28-206ENST00000520946 TULP2O00295 520 aa11.92□□□□□ -0.5
MRPS28-206ENST00000520946 PIK3R2O00459 728 aa11.92□□□□□ -0.5
MRPS28-206ENST00000520946 TLX3O43711 291 aaPredicted RBP11.92□□□□□ -0.5
MRPS28-206ENST00000520946 BRINP1O60477 761 aa11.92□□□□□ -0.5
MRPS28-206ENST00000520946 F13A1P00488 732 aa11.92□□□□□ -0.5
MRPS28-206ENST00000520946 WNT1P04628 370 aa11.92□□□□□ -0.5
MRPS28-206ENST00000520946 SRPRAP08240 638 aaKnown RBP11.92□□□□□ -0.5
MRPS28-206ENST00000520946 ZSCAN22P10073 491 aaPredicted RBP11.92□□□□□ -0.5
MRPS28-206ENST00000520946 VDRP11473 427 aa11.92□□□□□ -0.5
MRPS28-206ENST00000520946 EPHA8P29322 1005 aaPredicted RBP11.92□□□□□ -0.5
MRPS28-206ENST00000520946 RGS7P49802 495 aa11.92□□□□□ -0.5
MRPS28-206ENST00000520946 SGSHP51688 502 aa11.92□□□□□ -0.5
MRPS28-206ENST00000520946 ECT2LQ008S8 904 aa11.92□□□□□ -0.5
MRPS28-206ENST00000520946 BNIP3Q12983 259 aa11.92□□□□□ -0.5
MRPS28-206ENST00000520946 RTP5Q14D33 572 aa11.92□□□□□ -0.5
MRPS28-206ENST00000520946 NFIL3Q16649 462 aa11.92□□□□□ -0.5
MRPS28-206ENST00000520946 ACCSLQ4AC99 568 aa11.92□□□□□ -0.5
MRPS28-206ENST00000520946 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.92□□□□□ -0.5
MRPS28-206ENST00000520946 KDM7AQ6ZMT4 941 aa11.92□□□□□ -0.5
MRPS28-206ENST00000520946 DSG4Q86SJ6 1040 aa11.92□□□□□ -0.5
MRPS28-206ENST00000520946 WFDC5Q8TCV5 224 aa11.92□□□□□ -0.5
MRPS28-206ENST00000520946 SEMA4DQ92854 862 aa11.92□□□□□ -0.5
MRPS28-206ENST00000520946 TTC17Q96AE7 1141 aa11.92□□□□□ -0.5
MRPS28-206ENST00000520946 NAF1Q96HR8 494 aaKnown RBP11.92□□□□□ -0.5
MRPS28-206ENST00000520946 TJP2Q9UDY2 1190 aa11.92□□□□□ -0.5
MRPS28-206ENST00000520946 SERGEFQ9UGK8 458 aa11.92□□□□□ -0.5
MRPS28-206ENST00000520946 ADAMTS1Q9UHI8 967 aa11.92□□□□□ -0.5
MRPS28-206ENST00000520946 KIAA1257Q9ULG3 409 aa11.92□□□□□ -0.5
MRPS28-206ENST00000520946 MOCS2O96007 188 aaPredicted RBP11.91□□□□□ -0.5
MRPS28-206ENST00000520946 APOEP02649 317 aa11.91□□□□□ -0.5
MRPS28-206ENST00000520946 LTFP02788 710 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms