RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 LTN1O94822 1766 aa4.78□□□□□ -1.64
CLK4-207ENST00000520909 JCADQ9P266 1359 aa4.78□□□□□ -1.64
CLK4-207ENST00000520909 SLC22A23A1A5C7 686 aa4.78□□□□□ -1.64
CLK4-207ENST00000520909 PRPF4O43172 522 aaKnown RBP eCLIP4.78□□□□□ -1.64
CLK4-207ENST00000520909 HTATSF1O43719 755 aaKnown RBP4.78□□□□□ -1.64
CLK4-207ENST00000520909 PRAMEF2O60811 474 aa4.78□□□□□ -1.64
CLK4-207ENST00000520909 PLA2G2AP14555 144 aa4.78□□□□□ -1.64
CLK4-207ENST00000520909 RPS6KB1P23443 525 aa4.78□□□□□ -1.64
CLK4-207ENST00000520909 HOXA7P31268 230 aaPredicted RBP4.78□□□□□ -1.64
CLK4-207ENST00000520909 POLD2P49005 469 aa4.78□□□□□ -1.64
CLK4-207ENST00000520909 EIF4A1P60842 406 aaKnown RBP4.78□□□□□ -1.64
CLK4-207ENST00000520909 SLC29A2Q14542 456 aa4.78□□□□□ -1.64
CLK4-207ENST00000520909 PTGR1Q14914 329 aa4.78□□□□□ -1.64
CLK4-207ENST00000520909 C1orf141Q5JVX7 400 aa4.78□□□□□ -1.64
CLK4-207ENST00000520909 B3GNT9Q6UX72 402 aa4.78□□□□□ -1.64
CLK4-207ENST00000520909 MICU3Q86XE3 530 aa4.78□□□□□ -1.64
CLK4-207ENST00000520909 IL31RAQ8NI17 732 aa4.78□□□□□ -1.64
CLK4-207ENST00000520909 TSR2Q969E8 191 aaKnown RBP4.78□□□□□ -1.64
CLK4-207ENST00000520909 LMLNQ96KR4 655 aa4.78□□□□□ -1.64
CLK4-207ENST00000520909 HIST1H2AAQ96QV6 131 aa4.78□□□□□ -1.64
CLK4-207ENST00000520909 STK31Q9BXU1 1019 aa4.78□□□□□ -1.64
CLK4-207ENST00000520909 MYLK2Q9H1R3 596 aa4.78□□□□□ -1.64
CLK4-207ENST00000520909 MLXIPLQ9NP71 852 aa4.78□□□□□ -1.64
CLK4-207ENST00000520909 HOMER2Q9NSB8 354 aa4.78□□□□□ -1.64
CLK4-207ENST00000520909 HDAC9Q9UKV0 1011 aa4.78□□□□□ -1.64
CLK4-207ENST00000520909 HEMK1Q9Y5R4 338 aaPredicted RBP4.78□□□□□ -1.64
CLK4-207ENST00000520909 PHRF1Q9P1Y6 1649 aaKnown RBP4.78□□□□□ -1.64
CLK4-207ENST00000520909 CAMTA1Q9Y6Y1 1673 aa4.78□□□□□ -1.64
CLK4-207ENST00000520909 MAP3K5Q99683 1374 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.77□□□□□ -1.65
CLK4-207ENST00000520909 AQP7P3A6NL99 342 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 IFITM10A6NMD0 228 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 SPTLC2O15270 562 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 CA12O43570 354 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 HSPA6P17066 643 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 KLRC1P26715 233 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 ARRB2P32121 409 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 NEK2P51955 445 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 P2RX3P56373 397 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 IRX6P78412 446 aaPredicted RBP4.77□□□□□ -1.65
CLK4-207ENST00000520909 MTA1Q13330 715 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 ANO6Q4KMQ2 910 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 BRDTQ58F21 947 aaPredicted RBP4.77□□□□□ -1.65
CLK4-207ENST00000520909 C9orf50Q5SZB4 431 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 CLEC9AQ6UXN8 241 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 USP49Q70CQ1 688 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 IL17REQ8NFR9 667 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 PPP1R35Q8TAP8 253 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 NUDCD2Q8WVJ2 157 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 DNASE2BQ8WZ79 361 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 ATP2A3Q93084 1043 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 P2RY11Q96G91 374 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 FAM83DQ9H4H8 585 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 FZD3Q9NPG1 666 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 PAPOLBQ9NRJ5 636 aaKnown RBP4.77□□□□□ -1.65
CLK4-207ENST00000520909 SACM1LQ9NTJ5 587 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 MIS18AQ9NYP9 233 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 ANAPC4Q9UJX5 808 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 COL16A1Q07092 1604 aaPredicted RBP4.77□□□□□ -1.65
CLK4-207ENST00000520909 FANCIQ9NVI1 1328 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 COL5A2P05997 1499 aaPredicted RBP4.77□□□□□ -1.65
CLK4-207ENST00000520909 RGPD1P0DJD0 1748 aa4.77□□□□□ -1.65
CLK4-207ENST00000520909 TRBV5-3A0A0A0MS03 114 aa4.76□□□□□ -1.65
CLK4-207ENST00000520909 CHL1O00533 1208 aa4.76□□□□□ -1.65
CLK4-207ENST00000520909 TBX3O15119 743 aa4.76□□□□□ -1.65
CLK4-207ENST00000520909 RNMTO43148 476 aaKnown RBP4.76□□□□□ -1.65
CLK4-207ENST00000520909 ZNF853P0CG23 659 aa4.76□□□□□ -1.65
CLK4-207ENST00000520909 TMIGD3P0DMS9 266 aaPredicted RBP4.76□□□□□ -1.65
CLK4-207ENST00000520909 HOXB2P14652 356 aa4.76□□□□□ -1.65
CLK4-207ENST00000520909 GALNSP34059 522 aa4.76□□□□□ -1.65
CLK4-207ENST00000520909 AGFG1P52594 562 aaKnown RBP4.76□□□□□ -1.65
CLK4-207ENST00000520909 WDR5P61964 334 aaKnown RBP4.76□□□□□ -1.65
CLK4-207ENST00000520909 NFATC4Q14934 902 aa4.76□□□□□ -1.65
CLK4-207ENST00000520909 TAF7Q15545 349 aaPredicted RBP4.76□□□□□ -1.65
CLK4-207ENST00000520909 RBM44Q6ZP01 1051 aaKnown RBP4.76□□□□□ -1.65
CLK4-207ENST00000520909 TRAPPC11Q7Z392 1133 aa4.76□□□□□ -1.65
CLK4-207ENST00000520909 TFAP2DQ7Z6R9 452 aa4.76□□□□□ -1.65
CLK4-207ENST00000520909 UEVLDQ8IX04 471 aa4.76□□□□□ -1.65
CLK4-207ENST00000520909 ADGRF4Q8IZF3 695 aa4.76□□□□□ -1.65
CLK4-207ENST00000520909 ZCRB1Q8TBF4 217 aaKnown RBP4.76□□□□□ -1.65
CLK4-207ENST00000520909 HOOK2Q96ED9 719 aa4.76□□□□□ -1.65
CLK4-207ENST00000520909 ACO2Q99798 780 aaKnown RBP4.76□□□□□ -1.65
CLK4-207ENST00000520909 ZCWPW1Q9H0M4 648 aa4.76□□□□□ -1.65
CLK4-207ENST00000520909 RBM38Q9H0Z9 239 aaKnown RBP4.76□□□□□ -1.65
CLK4-207ENST00000520909 ATP6V0A4Q9HBG4 840 aa4.76□□□□□ -1.65
CLK4-207ENST00000520909 NMRK2Q9NPI5 230 aa4.76□□□□□ -1.65
CLK4-207ENST00000520909 VPS45Q9NRW7 570 aa4.76□□□□□ -1.65
CLK4-207ENST00000520909 PNMA8BQ9ULN7 279 aaPredicted RBP4.76□□□□□ -1.65
CLK4-207ENST00000520909 PCDHA7Q9UN72 937 aa4.76□□□□□ -1.65
CLK4-207ENST00000520909 SLC27A6Q9Y2P4 619 aa4.76□□□□□ -1.65
CLK4-207ENST00000520909 ABCC6O95255 1503 aa4.76□□□□□ -1.65
CLK4-207ENST00000520909 COL18A1P39060 1754 aa4.76□□□□□ -1.65
CLK4-207ENST00000520909 NCAPD2Q15021 1401 aa4.76□□□□□ -1.65
CLK4-207ENST00000520909 CRYBG1Q9Y4K1 1723 aa4.76□□□□□ -1.65
CLK4-207ENST00000520909 RGPD5Q99666 1765 aa4.76□□□□□ -1.65
CLK4-207ENST00000520909 A0A1W2PPC1 479 aa4.75□□□□□ -1.65
CLK4-207ENST00000520909 TRIM43BA6NCK2 446 aa4.75□□□□□ -1.65
CLK4-207ENST00000520909 RAB27BO00194 218 aa4.75□□□□□ -1.65
CLK4-207ENST00000520909 PLIN1O60240 522 aa4.75□□□□□ -1.65
CLK4-207ENST00000520909 UGDHO60701 494 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms