RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 BOLA2Q9H3K6 86 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 MTG2Q9H4K7 406 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 SOX17Q9H6I2 414 aaPredicted RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 LIN28AQ9H9Z2 209 aaKnown RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 ABCB6Q9NP58 842 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 GPATCH2Q9NW75 528 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 FLVCR2Q9UPI3 526 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 N6AMT1Q9Y5N5 214 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 A0A0D9SFI3 127 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 FAM234BA2RU67 622 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 URADA6NGE7 173 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 LRRC53A6NM62 1247 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 GOLGA8JA6NMD2 632 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 C16orf96A6NNT2 1141 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 WWP2O00308 870 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 SLC33A1O00400 549 aaPredicted RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 ANGPT2O15123 496 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 NMT2O60551 498 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 ZWINTO95229 277 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 CBX7O95931 251 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 RAB6AP20340 208 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 HDAC4P56524 1084 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 SLC26A5P58743 744 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 GCNT1Q02742 428 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 NAE1Q13564 534 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 GRAPQ13588 217 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 CCINQ13939 588 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 KIZQ2M2Z5 673 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 RARS2Q5T160 578 aaKnown RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 FAM171A1Q5VUB5 890 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 TICAM1Q8IUC6 712 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 ZNF619Q8N2I2 560 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 RCBTB1Q8NDN9 531 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 PIP4K2CQ8TBX8 421 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 GRAPLQ8TC17 118 aaPredicted RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 EZH1Q92800 747 aaPredicted RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 ZNF274Q96GC6 653 aaPredicted RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 FAM89AQ96GI7 184 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 TPD52L3Q96J77 140 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 ZNF560Q96MR9 790 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 RPRD1AQ96P16 312 aaPredicted RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 NUDCD1Q96RS6 583 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 KCNS3Q9BQ31 491 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 UBAC1Q9BSL1 405 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 TTLL2Q9BWV7 592 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 GHITMQ9H3K2 345 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 VCPKMTQ9H867 229 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 SPON1Q9HCB6 807 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 RABGEF1Q9UJ41 708 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 PCDHGC5Q9Y5F6 944 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 MYH6P13533 1939 aa4.03□□□□□ -1.77
NEDD4-209ENST00000508871 PRRG1O14668 218 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 SLC7A4O43246 635 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 CD2BP2O95400 341 aaKnown RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 BCL10O95999 233 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 VIPP01282 170 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 RARBP10826 455 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 ALAS1P13196 640 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 PTNP21246 168 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 TM4SF1P30408 202 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 RGS2P41220 211 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 PSEN2P49810 448 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 RPL11P62913 178 aaKnown RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 PPATQ06203 517 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 GRSF1Q12849 480 aaKnown RBP eCLIP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 SCARB2Q14108 478 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 DOC2AQ14183 400 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 ZNF423Q2M1K9 1284 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 CRY2Q49AN0 593 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 PTPN20Q4JDL3 420 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 CAVIN4Q5BKX8 364 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 ZMAT1Q5H9K5 638 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 GPATCH4Q5T3I0 446 aaKnown RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 TBC1D9BQ66K14 1250 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 SLC25A24Q6NUK1 477 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 THSD4Q6ZMP0 1018 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 TMTC3Q6ZXV5 915 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 BATF2Q8N1L9 274 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 NKAPQ8N5F7 415 aaKnown RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 C12orf50Q8NA57 414 aaPredicted RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 BBS1Q8NFJ9 593 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 OR56B2PQ8NGI1 322 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 NCOA7Q8NI08 942 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 NUDT8Q8WV74 236 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 NRG4Q8WWG1 115 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 MARK4Q96L34 752 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 BBS4Q96RK4 519 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 P2RX7Q99572 595 aaKnown RBP4.02□□□□□ -1.77
NEDD4-209ENST00000508871 LZTS2Q9BRK4 669 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 C17orf80Q9BSJ5 609 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 FAM107BQ9H098 131 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 NRDE2Q9H7Z3 1164 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 PSTPIP2Q9H939 334 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 CYP4F12Q9HCS2 524 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 HOMER3Q9NSC5 361 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 GFOD1Q9NXC2 390 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 TAS2R10Q9NYW0 307 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 ANKMY1Q9P2S6 941 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 AMACRQ9UHK6 382 aa4.02□□□□□ -1.77
NEDD4-209ENST00000508871 HSF4Q9ULV5 492 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms