RNA–Protein interactions for RNA: ENST00000507901.5

DDR1-261, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-261ENST00000507901 RNF34Q969K3 372 aa16.92■□□□□ 0.3
DDR1-261ENST00000507901 NHEJ1Q9H9Q4 299 aaPredicted RBP16.92■□□□□ 0.3
DDR1-261ENST00000507901 CD248Q9HCU0 757 aa16.92■□□□□ 0.3
DDR1-261ENST00000507901 POLR3BQ9NW08 1133 aaPredicted RBP16.92■□□□□ 0.3
DDR1-261ENST00000507901 ZNF212Q9UDV6 495 aa16.92■□□□□ 0.3
DDR1-261ENST00000507901 PAXBP1Q9Y5B6 917 aa16.92■□□□□ 0.3
DDR1-261ENST00000507901 DMDP11532 3685 aa16.92■□□□□ 0.3
DDR1-261ENST00000507901 MYO15AQ9UKN7 3530 aa16.91■□□□□ 0.3
DDR1-261ENST00000507901 F5H5T6 163 aa16.91■□□□□ 0.3
DDR1-261ENST00000507901 ATG13O75143 517 aa16.91■□□□□ 0.3
DDR1-261ENST00000507901 ADRA1BP35368 520 aa16.91■□□□□ 0.3
DDR1-261ENST00000507901 GGCXP38435 758 aa16.91■□□□□ 0.3
DDR1-261ENST00000507901 GALCP54803 685 aa16.91■□□□□ 0.3
DDR1-261ENST00000507901 SEC13P55735 322 aa16.91■□□□□ 0.3
DDR1-261ENST00000507901 CDO1Q16878 200 aa16.91■□□□□ 0.3
DDR1-261ENST00000507901 FSCBQ5H9T9 825 aa16.91■□□□□ 0.3
DDR1-261ENST00000507901 CCDC122Q5T0U0 273 aa16.91■□□□□ 0.3
DDR1-261ENST00000507901 TTC39BQ5VTQ0 682 aaPredicted RBP16.91■□□□□ 0.3
DDR1-261ENST00000507901 CXorf57Q6NSI4 855 aaKnown RBP16.91■□□□□ 0.3
DDR1-261ENST00000507901 CYP4V2Q6ZWL3 525 aaPredicted RBP16.91■□□□□ 0.3
DDR1-261ENST00000507901 SND1Q7KZF4 910 aaKnown RBP eCLIP16.91■□□□□ 0.3
DDR1-261ENST00000507901 CCDC185Q8N715 623 aa16.91■□□□□ 0.3
DDR1-261ENST00000507901 ARHGEF26Q96DR7 871 aa16.91■□□□□ 0.3
DDR1-261ENST00000507901 SEMA4AQ9H3S1 761 aa16.91■□□□□ 0.3
DDR1-261ENST00000507901 INTS6Q9UL03 887 aaKnown RBP16.91■□□□□ 0.3
DDR1-261ENST00000507901 MMP17Q9ULZ9 603 aa16.91■□□□□ 0.3
DDR1-261ENST00000507901 SNX10Q9Y5X0 201 aa16.91■□□□□ 0.3
DDR1-261ENST00000507901 SCINQ9Y6U3 715 aa16.91■□□□□ 0.3
DDR1-261ENST00000507901 ANKRD62A6NC57 917 aa16.9■□□□□ 0.3
DDR1-261ENST00000507901 LAMTOR5O43504 91 aa16.9■□□□□ 0.3
DDR1-261ENST00000507901 CD70P32970 193 aa16.9■□□□□ 0.3
DDR1-261ENST00000507901 CXCL12P48061 93 aa16.9■□□□□ 0.3
DDR1-261ENST00000507901 LMAN2Q12907 356 aa16.9■□□□□ 0.3
DDR1-261ENST00000507901 EIF4HQ15056 248 aaKnown RBP16.9■□□□□ 0.3
DDR1-261ENST00000507901 C2orf27AQ580R0 203 aa16.9■□□□□ 0.3
DDR1-261ENST00000507901 EGFLAMQ63HQ2 1017 aa16.9■□□□□ 0.3
DDR1-261ENST00000507901 DCUN1D2Q6PH85 259 aa16.9■□□□□ 0.3
DDR1-261ENST00000507901 MFN1Q8IWA4 741 aa16.9■□□□□ 0.3
DDR1-261ENST00000507901 ALLCQ8N6M5 410 aa16.9■□□□□ 0.3
DDR1-261ENST00000507901 ZNF557Q8N988 423 aaPredicted RBP16.9■□□□□ 0.3
DDR1-261ENST00000507901 WFIKKN2Q8TEU8 576 aa16.9■□□□□ 0.3
DDR1-261ENST00000507901 ACDQ96AP0 544 aa16.9■□□□□ 0.3
DDR1-261ENST00000507901 GABRG3Q99928 467 aa16.9■□□□□ 0.3
DDR1-261ENST00000507901 PACSIN1Q9BY11 444 aa16.9■□□□□ 0.3
DDR1-261ENST00000507901 MAGEB5Q9BZ81 275 aa16.9■□□□□ 0.3
DDR1-261ENST00000507901 OSBPL2Q9H1P3 480 aa16.9■□□□□ 0.3
DDR1-261ENST00000507901 ABCB8Q9NUT2 735 aa16.9■□□□□ 0.3
DDR1-261ENST00000507901 ZNHIT6Q9NWK9 470 aaKnown RBP16.9■□□□□ 0.3
DDR1-261ENST00000507901 THAP10Q9P2Z0 257 aaPredicted RBP16.9■□□□□ 0.3
DDR1-261ENST00000507901 GGA2Q9UJY4 613 aa16.9■□□□□ 0.3
DDR1-261ENST00000507901 VANGL2Q9ULK5 521 aa16.9■□□□□ 0.3
DDR1-261ENST00000507901 VPS13AQ96RL7 3174 aa16.9■□□□□ 0.3
DDR1-261ENST00000507901 A0A1B0GVM2 712 aa16.89■□□□□ 0.29
DDR1-261ENST00000507901 PRR23AA6NEV1 266 aa16.89■□□□□ 0.29
DDR1-261ENST00000507901 TCAF2A6NFQ2 919 aa16.89■□□□□ 0.29
DDR1-261ENST00000507901 SGK1O00141 431 aa16.89■□□□□ 0.29
DDR1-261ENST00000507901 LCA5LO95447 670 aa16.89■□□□□ 0.29
DDR1-261ENST00000507901 PABPC1P11940 636 aaKnown RBP16.89■□□□□ 0.29
DDR1-261ENST00000507901 TIE1P35590 1138 aa16.89■□□□□ 0.29
DDR1-261ENST00000507901 SEMA3BQ13214 749 aa16.89■□□□□ 0.29
DDR1-261ENST00000507901 FUT11Q495W5 492 aa16.89■□□□□ 0.29
DDR1-261ENST00000507901 ALFQ53S48 1182 aa16.89■□□□□ 0.29
DDR1-261ENST00000507901 RABGAP1LQ5R372 815 aa16.89■□□□□ 0.29
DDR1-261ENST00000507901 ZC3H14Q6PJT7 736 aaKnown RBP16.89■□□□□ 0.29
DDR1-261ENST00000507901 TSSK4Q6SA08 328 aa16.89■□□□□ 0.29
DDR1-261ENST00000507901 CHST9Q7L1S5 443 aa16.89■□□□□ 0.29
DDR1-261ENST00000507901 CIR1Q86X95 450 aaPredicted RBP16.89■□□□□ 0.29
DDR1-261ENST00000507901 CCAR2Q8N163 923 aaKnown RBP16.89■□□□□ 0.29
DDR1-261ENST00000507901 ZNF513Q8N8E2 541 aaPredicted RBP16.89■□□□□ 0.29
DDR1-261ENST00000507901 NIPA2Q8N8Q9 360 aa16.89■□□□□ 0.29
DDR1-261ENST00000507901 ZBTB44Q8NCP5 570 aa16.89■□□□□ 0.29
DDR1-261ENST00000507901 OR52K2Q8NGK3 314 aa16.89■□□□□ 0.29
DDR1-261ENST00000507901 TTC17Q96AE7 1141 aa16.89■□□□□ 0.29
DDR1-261ENST00000507901 ALG14Q96F25 216 aa16.89■□□□□ 0.29
DDR1-261ENST00000507901 PANX2Q96RD6 677 aa16.89■□□□□ 0.29
DDR1-261ENST00000507901 ACOX2Q99424 681 aa16.89■□□□□ 0.29
DDR1-261ENST00000507901 SIK2Q9H0K1 926 aa16.89■□□□□ 0.29
DDR1-261ENST00000507901 MRPL47Q9HD33 250 aaKnown RBP16.89■□□□□ 0.29
DDR1-261ENST00000507901 ZDHHC4Q9NPG8 344 aa16.89■□□□□ 0.29
DDR1-261ENST00000507901 ELOVL2Q9NXB9 296 aa16.89■□□□□ 0.29
DDR1-261ENST00000507901 STIM2Q9P246 746 aa16.89■□□□□ 0.29
DDR1-261ENST00000507901 PPARGC1AQ9UBK2 798 aaKnown RBP16.89■□□□□ 0.29
DDR1-261ENST00000507901 TBC1D30Q9Y2I9 924 aa16.89■□□□□ 0.29
DDR1-261ENST00000507901 TYW5A2RUC4 315 aaKnown RBP16.88■□□□□ 0.29
DDR1-261ENST00000507901 E9PAM4 449 aa16.88■□□□□ 0.29
DDR1-261ENST00000507901 FAM72CH0Y354 149 aa16.88■□□□□ 0.29
DDR1-261ENST00000507901 LILRB5O75023 590 aa16.88■□□□□ 0.29
DDR1-261ENST00000507901 CNTN5O94779 1100 aa16.88■□□□□ 0.29
DDR1-261ENST00000507901 KLF8O95600 359 aaPredicted RBP16.88■□□□□ 0.29
DDR1-261ENST00000507901 C7P10643 843 aa16.88■□□□□ 0.29
DDR1-261ENST00000507901 PLK1P53350 603 aa16.88■□□□□ 0.29
DDR1-261ENST00000507901 AIF1P55008 147 aa16.88■□□□□ 0.29
DDR1-261ENST00000507901 CSTF1Q05048 431 aaKnown RBP16.88■□□□□ 0.29
DDR1-261ENST00000507901 DMWDQ09019 674 aa16.88■□□□□ 0.29
DDR1-261ENST00000507901 DMC1Q14565 340 aa16.88■□□□□ 0.29
DDR1-261ENST00000507901 PTPRNQ16849 979 aa16.88■□□□□ 0.29
DDR1-261ENST00000507901 TSR1Q2NL82 804 aaKnown RBP16.88■□□□□ 0.29
DDR1-261ENST00000507901 FAM72AQ5TYM5 149 aa16.88■□□□□ 0.29
DDR1-261ENST00000507901 FAM72DQ6L9T8 149 aa16.88■□□□□ 0.29
DDR1-261ENST00000507901 TMEM92Q6UXU6 159 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 216.1 ms