RNA–Protein interactions for RNA: ENST00000506960.5

SSBP2-206, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-206ENST00000506960 SLC22A23A1A5C7 686 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 HMX3A6NHT5 357 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 B4DGG1 531 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 TULP3O75386 442 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 NTSR2O95665 410 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 ANXA6P08133 673 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 ITGA5P08648 1049 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 ALADP13716 330 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 GYS1P13807 737 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 HOXA7P31268 230 aaPredicted RBP4□□□□□ -1.77
SSBP2-206ENST00000506960 SERPINF1P36955 418 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 GRK6P43250 576 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 RNASELQ05823 741 aaKnown RBP4□□□□□ -1.77
SSBP2-206ENST00000506960 PRKG1Q13976 671 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 GRM4Q14833 912 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 BTBD16Q32M84 506 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 EARS2Q5JPH6 523 aaKnown RBP4□□□□□ -1.77
SSBP2-206ENST00000506960 ATPAF1Q5TC12 328 aaPredicted RBP4□□□□□ -1.77
SSBP2-206ENST00000506960 ANKRD40Q6AI12 368 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 SULT6B1Q6IMI4 303 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 MEPCEQ7L2J0 689 aaKnown RBP4□□□□□ -1.77
SSBP2-206ENST00000506960 CCDC117Q8IWD4 279 aaPredicted RBP4□□□□□ -1.77
SSBP2-206ENST00000506960 MMP21Q8N119 569 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 PELI3Q8N2H9 469 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 CLASRPQ8N2M8 674 aaKnown RBP4□□□□□ -1.77
SSBP2-206ENST00000506960 MPLKIPQ8TAP9 179 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 RTKNQ9BST9 563 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 GATA5Q9BWX5 397 aaPredicted RBP4□□□□□ -1.77
SSBP2-206ENST00000506960 FAM234AQ9H0X4 552 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 MYLK2Q9H1R3 596 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 MYH16Q9H6N6 1097 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 FSCN3Q9NQT6 498 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 ABHD10Q9NUJ1 306 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 TMEM45AQ9NWC5 275 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 LAMC3Q9Y6N6 1575 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 HMGXB3Q12766 1538 aa4□□□□□ -1.77
SSBP2-206ENST00000506960 SMARCA4P51532 1647 aa3.99□□□□□ -1.77
SSBP2-206ENST00000506960 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.99□□□□□ -1.77
SSBP2-206ENST00000506960 PPP6R2O75170 966 aa3.99□□□□□ -1.77
SSBP2-206ENST00000506960 TAF5LO75529 589 aa3.99□□□□□ -1.77
SSBP2-206ENST00000506960 RPP40O75818 363 aaKnown RBP3.99□□□□□ -1.77
SSBP2-206ENST00000506960 ACTL6BO94805 426 aa3.99□□□□□ -1.77
SSBP2-206ENST00000506960 MMP8P22894 467 aa3.99□□□□□ -1.77
SSBP2-206ENST00000506960 RPS6KB1P23443 525 aa3.99□□□□□ -1.77
SSBP2-206ENST00000506960 IDUAP35475 653 aa3.99□□□□□ -1.77
SSBP2-206ENST00000506960 IGHMBP2P38935 993 aaKnown RBP3.99□□□□□ -1.77
SSBP2-206ENST00000506960 B4GALNT1Q00973 533 aa3.99□□□□□ -1.77
SSBP2-206ENST00000506960 RPS6KA2Q15349 733 aa3.99□□□□□ -1.77
SSBP2-206ENST00000506960 ZRSR2Q15696 482 aaKnown RBP3.99□□□□□ -1.77
SSBP2-206ENST00000506960 LIN54Q6MZP7 749 aa3.99□□□□□ -1.77
SSBP2-206ENST00000506960 RBM44Q6ZP01 1051 aaKnown RBP3.99□□□□□ -1.77
SSBP2-206ENST00000506960 PIK3AP1Q6ZUJ8 805 aa3.99□□□□□ -1.77
SSBP2-206ENST00000506960 PIM3Q86V86 326 aa3.99□□□□□ -1.77
SSBP2-206ENST00000506960 SPATA5Q8NB90 893 aa3.99□□□□□ -1.77
SSBP2-206ENST00000506960 TRAPPC12Q8WVT3 735 aa3.99□□□□□ -1.77
SSBP2-206ENST00000506960 PIGKQ92643 395 aa3.99□□□□□ -1.77
SSBP2-206ENST00000506960 P2RY11Q96G91 374 aa3.99□□□□□ -1.77
SSBP2-206ENST00000506960 FAR2Q96K12 515 aa3.99□□□□□ -1.77
SSBP2-206ENST00000506960 SCLT1Q96NL6 688 aa3.99□□□□□ -1.77
SSBP2-206ENST00000506960 SORBS1Q9BX66 1292 aaKnown RBP3.99□□□□□ -1.77
SSBP2-206ENST00000506960 TP63Q9H3D4 680 aaPredicted RBP3.99□□□□□ -1.77
SSBP2-206ENST00000506960 SEMA4BQ9NPR2 832 aaPredicted RBP3.99□□□□□ -1.77
SSBP2-206ENST00000506960 HERC5Q9UII4 1024 aaKnown RBP3.99□□□□□ -1.77
SSBP2-206ENST00000506960 NFU1Q9UMS0 254 aa3.99□□□□□ -1.77
SSBP2-206ENST00000506960 UBE2J1Q9Y385 318 aaPredicted RBP3.99□□□□□ -1.77
SSBP2-206ENST00000506960 KIF28PB7ZC32 967 aa3.98□□□□□ -1.77
SSBP2-206ENST00000506960 PRYO14603 147 aa3.98□□□□□ -1.77
SSBP2-206ENST00000506960 CTIFO43310 598 aaKnown RBP3.98□□□□□ -1.77
SSBP2-206ENST00000506960 SMAD6O43541 496 aaKnown RBP3.98□□□□□ -1.77
SSBP2-206ENST00000506960 CER1O95813 267 aa3.98□□□□□ -1.77
SSBP2-206ENST00000506960 CD63P08962 238 aa3.98□□□□□ -1.77
SSBP2-206ENST00000506960 ST6GAL1P15907 406 aa3.98□□□□□ -1.77
SSBP2-206ENST00000506960 HALP42357 657 aa3.98□□□□□ -1.77
SSBP2-206ENST00000506960 POLE2P56282 527 aa3.98□□□□□ -1.77
SSBP2-206ENST00000506960 AP2B1P63010 937 aa3.98□□□□□ -1.77
SSBP2-206ENST00000506960 SF3A3Q12874 501 aaKnown RBP eCLIP3.98□□□□□ -1.77
SSBP2-206ENST00000506960 GAB1Q13480 694 aa3.98□□□□□ -1.77
SSBP2-206ENST00000506960 KCNJ12Q14500 433 aa3.98□□□□□ -1.77
SSBP2-206ENST00000506960 DHX8Q14562 1220 aaKnown RBP3.98□□□□□ -1.77
SSBP2-206ENST00000506960 CNGA3Q16281 694 aa3.98□□□□□ -1.77
SSBP2-206ENST00000506960 ZNF569Q5MCW4 686 aa3.98□□□□□ -1.77
SSBP2-206ENST00000506960 FAM90A2PQ658T7 463 aa3.98□□□□□ -1.77
SSBP2-206ENST00000506960 MSANTD2Q6P1R3 559 aa3.98□□□□□ -1.77
SSBP2-206ENST00000506960 FAM57BQ71RH2 274 aa3.98□□□□□ -1.77
SSBP2-206ENST00000506960 RAB11FIP2Q7L804 512 aa3.98□□□□□ -1.77
SSBP2-206ENST00000506960 SLC22A17Q8WUG5 538 aa3.98□□□□□ -1.77
SSBP2-206ENST00000506960 HMGB4Q8WW32 186 aa3.98□□□□□ -1.77
SSBP2-206ENST00000506960 OVCA2Q8WZ82 227 aa3.98□□□□□ -1.77
SSBP2-206ENST00000506960 C3orf49Q96BT1 292 aa3.98□□□□□ -1.77
SSBP2-206ENST00000506960 HERPUD2Q9BSE4 406 aa3.98□□□□□ -1.77
SSBP2-206ENST00000506960 CCDC134Q9H6E4 229 aa3.98□□□□□ -1.77
SSBP2-206ENST00000506960 ELAC1Q9H777 363 aaKnown RBP3.98□□□□□ -1.77
SSBP2-206ENST00000506960 MSRB1Q9NZV6 116 aa3.98□□□□□ -1.77
SSBP2-206ENST00000506960 RIPOR2Q9Y4F9 1068 aa3.98□□□□□ -1.77
SSBP2-206ENST00000506960 PCDHB7Q9Y5E2 793 aa3.98□□□□□ -1.77
SSBP2-206ENST00000506960 HEMK1Q9Y5R4 338 aaPredicted RBP3.98□□□□□ -1.77
SSBP2-206ENST00000506960 ARAP1Q96P48 1450 aa3.98□□□□□ -1.77
SSBP2-206ENST00000506960 IGLV5-39A0A0G2JS06 123 aa3.97□□□□□ -1.77
SSBP2-206ENST00000506960 PLEKHD1A6NEE1 506 aa3.97□□□□□ -1.77
SSBP2-206ENST00000506960 FAM90A8PA6NJQ4 464 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms