RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 SND1Q7KZF4 910 aaKnown RBP eCLIP13.08□□□□□ -0.32
LSM6-204ENST00000504181 TBC1D3Q8IZP1 549 aaPredicted RBP13.08□□□□□ -0.32
LSM6-204ENST00000504181 AADATQ8N5Z0 425 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 JAKMIP2Q96AA8 810 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 C8orf76Q96K31 380 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 DCLK3Q9C098 648 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 ADNPQ9H2P0 1102 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 ZNF768Q9H5H4 540 aaKnown RBP13.08□□□□□ -0.32
LSM6-204ENST00000504181 EVA1BQ9NVM1 165 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 NLGN3Q9NZ94 848 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 ARHGAP20Q9P2F6 1191 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 ANAPC2Q9UJX6 822 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 GGA2Q9UJY4 613 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 SDK2Q58EX2 2172 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 ZFHX3Q15911 3703 aa13.08□□□□□ -0.32
LSM6-204ENST00000504181 UNC13CQ8NB66 2214 aa13.07□□□□□ -0.32
LSM6-204ENST00000504181 A1L4Q6 167 aa13.07□□□□□ -0.32
LSM6-204ENST00000504181 CASC3O15234 703 aaKnown RBP13.07□□□□□ -0.32
LSM6-204ENST00000504181 LATO43561 262 aa13.07□□□□□ -0.32
LSM6-204ENST00000504181 PIAS2O75928 621 aa13.07□□□□□ -0.32
LSM6-204ENST00000504181 NEBLO76041 1014 aa13.07□□□□□ -0.32
LSM6-204ENST00000504181 AGFG2O95081 481 aa13.07□□□□□ -0.32
LSM6-204ENST00000504181 CST3P01034 146 aaPredicted RBP13.07□□□□□ -0.32
LSM6-204ENST00000504181 DLDP09622 509 aaKnown RBP13.07□□□□□ -0.32
LSM6-204ENST00000504181 CCDC130P13994 396 aa13.07□□□□□ -0.32
LSM6-204ENST00000504181 WT1P19544 449 aaPredicted RBP13.07□□□□□ -0.32
LSM6-204ENST00000504181 TNFRSF8P28908 595 aa13.07□□□□□ -0.32
LSM6-204ENST00000504181 SLC8A1P32418 973 aa13.07□□□□□ -0.32
LSM6-204ENST00000504181 PSMD8P48556 350 aa13.07□□□□□ -0.32
LSM6-204ENST00000504181 KCNAB2Q13303 367 aa13.07□□□□□ -0.32
LSM6-204ENST00000504181 MORC3Q14149 939 aa13.07□□□□□ -0.32
LSM6-204ENST00000504181 MCM6Q14566 821 aa13.07□□□□□ -0.32
LSM6-204ENST00000504181 STAT4Q14765 748 aa13.07□□□□□ -0.32
LSM6-204ENST00000504181 WDR72Q3MJ13 1102 aa13.07□□□□□ -0.32
LSM6-204ENST00000504181 GUSBP11Q6P575 273 aa13.07□□□□□ -0.32
LSM6-204ENST00000504181 ZNF720Q7Z2F6 126 aa13.07□□□□□ -0.32
LSM6-204ENST00000504181 EFL1Q7Z2Z2 1120 aaKnown RBP13.07□□□□□ -0.32
LSM6-204ENST00000504181 PRPF39Q86UA1 669 aaKnown RBP13.07□□□□□ -0.32
LSM6-204ENST00000504181 SFR1Q86XK3 245 aa13.07□□□□□ -0.32
LSM6-204ENST00000504181 FUKQ8N0W3 1084 aa13.07□□□□□ -0.32
LSM6-204ENST00000504181 AHI1Q8N157 1196 aa13.07□□□□□ -0.32
LSM6-204ENST00000504181 CPXM2Q8N436 756 aa13.07□□□□□ -0.32
LSM6-204ENST00000504181 SPATA20Q8TB22 786 aa13.07□□□□□ -0.32
LSM6-204ENST00000504181 HVCN1Q96D96 273 aa13.07□□□□□ -0.32
LSM6-204ENST00000504181 CBWD1Q9BRT8 395 aa13.07□□□□□ -0.32
LSM6-204ENST00000504181 USP29Q9HBJ7 922 aa13.07□□□□□ -0.32
LSM6-204ENST00000504181 NAGPAQ9UK23 515 aa13.07□□□□□ -0.32
LSM6-204ENST00000504181 SCML2Q9UQR0 700 aa13.07□□□□□ -0.32
LSM6-204ENST00000504181 RP1L1Q8IWN7 2480 aaPredicted RBP13.07□□□□□ -0.32
LSM6-204ENST00000504181 TRPM6Q9BX84 2022 aa13.06□□□□□ -0.32
LSM6-204ENST00000504181 NF1P21359 2839 aa13.06□□□□□ -0.32
LSM6-204ENST00000504181 F8P00451 2351 aa13.06□□□□□ -0.32
LSM6-204ENST00000504181 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.06□□□□□ -0.32
LSM6-204ENST00000504181 PPP1R37O75864 691 aa13.06□□□□□ -0.32
LSM6-204ENST00000504181 ATP5BP06576 529 aaKnown RBP13.06□□□□□ -0.32
LSM6-204ENST00000504181 LIPCP11150 499 aa13.06□□□□□ -0.32
LSM6-204ENST00000504181 PABPC1P11940 636 aaKnown RBP13.06□□□□□ -0.32
LSM6-204ENST00000504181 GARTP22102 1010 aa13.06□□□□□ -0.32
LSM6-204ENST00000504181 HARS2P49590 506 aaKnown RBP13.06□□□□□ -0.32
LSM6-204ENST00000504181 PDX1P52945 283 aa13.06□□□□□ -0.32
LSM6-204ENST00000504181 PDE4CQ08493 712 aa13.06□□□□□ -0.32
LSM6-204ENST00000504181 KCNMA1Q12791 1236 aa13.06□□□□□ -0.32
LSM6-204ENST00000504181 EFEMP1Q12805 493 aa13.06□□□□□ -0.32
LSM6-204ENST00000504181 OVGP1Q12889 678 aa13.06□□□□□ -0.32
LSM6-204ENST00000504181 ZNF177Q13360 481 aaPredicted RBP13.06□□□□□ -0.32
LSM6-204ENST00000504181 DRAP1Q14919 205 aaPredicted RBP13.06□□□□□ -0.32
LSM6-204ENST00000504181 DUOXA2Q1HG44 320 aa13.06□□□□□ -0.32
LSM6-204ENST00000504181 MIB2Q96AX9 1013 aa13.06□□□□□ -0.32
LSM6-204ENST00000504181 KLHDC7BQ96G42 594 aa13.06□□□□□ -0.32
LSM6-204ENST00000504181 MYOCQ99972 504 aa13.06□□□□□ -0.32
LSM6-204ENST00000504181 TPX2Q9ULW0 747 aaKnown RBP13.06□□□□□ -0.32
LSM6-204ENST00000504181 EXOC7Q9UPT5 735 aa13.06□□□□□ -0.32
LSM6-204ENST00000504181 UBE4BO95155 1302 aa13.06□□□□□ -0.32
LSM6-204ENST00000504181 VWA3AA6NCI4 1184 aa13.05□□□□□ -0.32
LSM6-204ENST00000504181 K7ESM1 405 aa13.05□□□□□ -0.32
LSM6-204ENST00000504181 GOT1P17174 413 aa13.05□□□□□ -0.32
LSM6-204ENST00000504181 POLR2EP19388 210 aaKnown RBP13.05□□□□□ -0.32
LSM6-204ENST00000504181 POLE2P56282 527 aa13.05□□□□□ -0.32
LSM6-204ENST00000504181 COG7P83436 770 aa13.05□□□□□ -0.32
LSM6-204ENST00000504181 MPPE1Q53F39 396 aa13.05□□□□□ -0.32
LSM6-204ENST00000504181 TRAPPC11Q7Z392 1133 aa13.05□□□□□ -0.32
LSM6-204ENST00000504181 GPD1LQ8N335 351 aa13.05□□□□□ -0.32
LSM6-204ENST00000504181 MYO19Q96H55 970 aa13.05□□□□□ -0.32
LSM6-204ENST00000504181 ACCSQ96QU6 501 aa13.05□□□□□ -0.32
LSM6-204ENST00000504181 SMYD3Q9H7B4 428 aa13.05□□□□□ -0.32
LSM6-204ENST00000504181 SYNDIG1Q9H7V2 258 aa13.05□□□□□ -0.32
LSM6-204ENST00000504181 CSNK1G1Q9HCP0 422 aa13.05□□□□□ -0.32
LSM6-204ENST00000504181 BLOC1S4Q9NUP1 217 aa13.05□□□□□ -0.32
LSM6-204ENST00000504181 TBC1D7Q9P0N9 293 aa13.05□□□□□ -0.32
LSM6-204ENST00000504181 SEPT10Q9P0V9 454 aa13.05□□□□□ -0.32
LSM6-204ENST00000504181 SEL1LQ9UBV2 794 aa13.05□□□□□ -0.32
LSM6-204ENST00000504181 CYTH4Q9UIA0 394 aa13.05□□□□□ -0.32
LSM6-204ENST00000504181 PCDHGA7Q9Y5G6 932 aa13.05□□□□□ -0.32
LSM6-204ENST00000504181 ZNF106Q9H2Y7 1883 aaKnown RBP13.05□□□□□ -0.32
LSM6-204ENST00000504181 ESPL1Q14674 2120 aa13.04□□□□□ -0.32
LSM6-204ENST00000504181 PDZD2O15018 2839 aa13.04□□□□□ -0.32
LSM6-204ENST00000504181 ADGRG4Q8IZF6 3080 aa13.04□□□□□ -0.32
LSM6-204ENST00000504181 PLD2O14939 933 aa13.04□□□□□ -0.32
LSM6-204ENST00000504181 MTSS1O43312 755 aa13.04□□□□□ -0.32
LSM6-204ENST00000504181 TCEA3O75764 348 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms