RNA–Protein interactions for RNA: ENST00000497072.1

PPM1F-209, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 3

Gene PPM1F, Length 159 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-209ENST00000497072 DNAJC12Q9UKB3 198 aa13.14□□□□□ -0.31
PPM1F-209ENST00000497072 SCML1Q9UN30 329 aa13.14□□□□□ -0.31
PPM1F-209ENST00000497072 CKAP5Q14008 2032 aa13.13□□□□□ -0.31
PPM1F-209ENST00000497072 SYNJ2BP-COX16A0A087WUM0 186 aa13.13□□□□□ -0.31
PPM1F-209ENST00000497072 HSF2BPO75031 334 aa13.13□□□□□ -0.31
PPM1F-209ENST00000497072 TRIM16O95361 564 aa13.13□□□□□ -0.31
PPM1F-209ENST00000497072 SEMA4FO95754 770 aa13.13□□□□□ -0.31
PPM1F-209ENST00000497072 CER1O95813 267 aa13.13□□□□□ -0.31
PPM1F-209ENST00000497072 TACR2P21452 398 aa13.13□□□□□ -0.31
PPM1F-209ENST00000497072 CCR1P32246 355 aa13.13□□□□□ -0.31
PPM1F-209ENST00000497072 CSKP41240 450 aa13.13□□□□□ -0.31
PPM1F-209ENST00000497072 OXCT1P55809 520 aa13.13□□□□□ -0.31
PPM1F-209ENST00000497072 SIM1P81133 766 aaPredicted RBP13.13□□□□□ -0.31
PPM1F-209ENST00000497072 GRIK2Q13002 908 aa13.13□□□□□ -0.31
PPM1F-209ENST00000497072 TEAD4Q15561 434 aa13.13□□□□□ -0.31
PPM1F-209ENST00000497072 PTPRNQ16849 979 aa13.13□□□□□ -0.31
PPM1F-209ENST00000497072 RABGAP1LQ5R372 815 aa13.13□□□□□ -0.31
PPM1F-209ENST00000497072 TTC39BQ5VTQ0 682 aaPredicted RBP13.13□□□□□ -0.31
PPM1F-209ENST00000497072 OR6B2Q6IFH4 312 aa13.13□□□□□ -0.31
PPM1F-209ENST00000497072 C11orf57Q6ZUT1 292 aaPredicted RBP13.13□□□□□ -0.31
PPM1F-209ENST00000497072 PASD1Q8IV76 773 aa13.13□□□□□ -0.31
PPM1F-209ENST00000497072 KDM1BQ8NB78 822 aa13.13□□□□□ -0.31
PPM1F-209ENST00000497072 WFDC5Q8TCV5 224 aa13.13□□□□□ -0.31
PPM1F-209ENST00000497072 TTC17Q96AE7 1141 aa13.13□□□□□ -0.31
PPM1F-209ENST00000497072 PRICKLE1Q96MT3 831 aaPredicted RBP13.13□□□□□ -0.31
PPM1F-209ENST00000497072 NUP62CLQ9H1M0 184 aa13.13□□□□□ -0.31
PPM1F-209ENST00000497072 SGK2Q9HBY8 427 aa13.13□□□□□ -0.31
PPM1F-209ENST00000497072 ACP6Q9NPH0 428 aa13.13□□□□□ -0.31
PPM1F-209ENST00000497072 ASNSD1Q9NWL6 643 aa13.13□□□□□ -0.31
PPM1F-209ENST00000497072 DDIT4Q9NX09 232 aa13.13□□□□□ -0.31
PPM1F-209ENST00000497072 COX16Q9P0S2 106 aa13.13□□□□□ -0.31
PPM1F-209ENST00000497072 EIF2B4Q9UI10 523 aaKnown RBP13.13□□□□□ -0.31
PPM1F-209ENST00000497072 PCDHGC3Q9UN70 934 aa13.13□□□□□ -0.31
PPM1F-209ENST00000497072 ADAMTS9Q9P2N4 1935 aa13.13□□□□□ -0.31
PPM1F-209ENST00000497072 BECN2A8MW95 431 aa13.12□□□□□ -0.31
PPM1F-209ENST00000497072 KCNU1A8MYU2 1149 aa13.12□□□□□ -0.31
PPM1F-209ENST00000497072 TPM2P07951 284 aa13.12□□□□□ -0.31
PPM1F-209ENST00000497072 SRPRAP08240 638 aaKnown RBP13.12□□□□□ -0.31
PPM1F-209ENST00000497072 ERCC5P28715 1186 aaPredicted RBP13.12□□□□□ -0.31
PPM1F-209ENST00000497072 MATKP42679 507 aa13.12□□□□□ -0.31
PPM1F-209ENST00000497072 AFF3P51826 1226 aaKnown RBP13.12□□□□□ -0.31
PPM1F-209ENST00000497072 RPS14P62263 151 aaKnown RBP13.12□□□□□ -0.31
PPM1F-209ENST00000497072 ECT2LQ008S8 904 aa13.12□□□□□ -0.31
PPM1F-209ENST00000497072 SLC12A1Q13621 1099 aa13.12□□□□□ -0.31
PPM1F-209ENST00000497072 VWA3BQ502W6 1294 aa13.12□□□□□ -0.31
PPM1F-209ENST00000497072 PITRM1Q5JRX3 1037 aa13.12□□□□□ -0.31
PPM1F-209ENST00000497072 PIP4P1Q86T03 277 aa13.12□□□□□ -0.31
PPM1F-209ENST00000497072 DEFB106AQ8N104 65 aa13.12□□□□□ -0.31
PPM1F-209ENST00000497072 TUBGCP2Q9BSJ2 902 aa13.12□□□□□ -0.31
PPM1F-209ENST00000497072 NDST4Q9H3R1 872 aa13.12□□□□□ -0.31
PPM1F-209ENST00000497072 CYTH4Q9UIA0 394 aa13.12□□□□□ -0.31
PPM1F-209ENST00000497072 ERVW-1Q9UQF0 538 aa13.12□□□□□ -0.31
PPM1F-209ENST00000497072 ASCC3Q8N3C0 2202 aaKnown RBP13.11□□□□□ -0.31
PPM1F-209ENST00000497072 EDDM13A0A1B0GTR0 161 aa13.11□□□□□ -0.31
PPM1F-209ENST00000497072 SPAARA0A1B0GVQ0 90 aa13.11□□□□□ -0.31
PPM1F-209ENST00000497072 TARSL2A2RTX5 802 aaKnown RBP13.11□□□□□ -0.31
PPM1F-209ENST00000497072 FSBPO95073 299 aa13.11□□□□□ -0.31
PPM1F-209ENST00000497072 ACSL1P33121 698 aa13.11□□□□□ -0.31
PPM1F-209ENST00000497072 ANP32AP39687 249 aaKnown RBP13.11□□□□□ -0.31
PPM1F-209ENST00000497072 APBA1Q02410 837 aa13.11□□□□□ -0.31
PPM1F-209ENST00000497072 SULT2A1Q06520 285 aa13.11□□□□□ -0.31
PPM1F-209ENST00000497072 RAPGEF1Q13905 1077 aa13.11□□□□□ -0.31
PPM1F-209ENST00000497072 HNRNPA1L2Q32P51 320 aaKnown RBP13.11□□□□□ -0.31
PPM1F-209ENST00000497072 USP30Q70CQ3 517 aa13.11□□□□□ -0.31
PPM1F-209ENST00000497072 SND1Q7KZF4 910 aaKnown RBP eCLIP13.11□□□□□ -0.31
PPM1F-209ENST00000497072 ADAT2Q7Z6V5 191 aaKnown RBP13.11□□□□□ -0.31
PPM1F-209ENST00000497072 IRF2BP1Q8IU81 584 aa13.11□□□□□ -0.31
PPM1F-209ENST00000497072 ZDHHC17Q8IUH5 632 aa13.11□□□□□ -0.31
PPM1F-209ENST00000497072 DHX40Q8IX18 779 aaKnown RBP13.11□□□□□ -0.31
PPM1F-209ENST00000497072 TMEM35BQ8NCS4 154 aa13.11□□□□□ -0.31
PPM1F-209ENST00000497072 MSANTD4Q8NCY6 345 aa13.11□□□□□ -0.31
PPM1F-209ENST00000497072 C1orf131Q8NDD1 294 aaKnown RBP13.11□□□□□ -0.31
PPM1F-209ENST00000497072 OR2I1PQ8NGU4 316 aa13.11□□□□□ -0.31
PPM1F-209ENST00000497072 SKA1Q96BD8 255 aa13.11□□□□□ -0.31
PPM1F-209ENST00000497072 RPRD1AQ96P16 312 aaPredicted RBP13.11□□□□□ -0.31
PPM1F-209ENST00000497072 CPXM1Q96SM3 734 aa13.11□□□□□ -0.31
PPM1F-209ENST00000497072 OMDQ99983 421 aa13.11□□□□□ -0.31
PPM1F-209ENST00000497072 RSPH9Q9H1X1 276 aaPredicted RBP13.11□□□□□ -0.31
PPM1F-209ENST00000497072 C6orf106Q9H6K1 298 aaPredicted RBP13.11□□□□□ -0.31
PPM1F-209ENST00000497072 GAREM1Q9H706 876 aa13.11□□□□□ -0.31
PPM1F-209ENST00000497072 TMEM51Q9NW97 253 aa13.11□□□□□ -0.31
PPM1F-209ENST00000497072 RRN3Q9NYV6 651 aa13.11□□□□□ -0.31
PPM1F-209ENST00000497072 XPO7Q9UIA9 1087 aaKnown RBP13.11□□□□□ -0.31
PPM1F-209ENST00000497072 STAP1Q9ULZ2 295 aa13.11□□□□□ -0.31
PPM1F-209ENST00000497072 PAXBP1Q9Y5B6 917 aa13.11□□□□□ -0.31
PPM1F-209ENST00000497072 TPRP12270 2363 aaKnown RBP13.1□□□□□ -0.31
PPM1F-209ENST00000497072 A0A1B0GVM2 712 aa13.1□□□□□ -0.31
PPM1F-209ENST00000497072 TCAF2A6NFQ2 919 aa13.1□□□□□ -0.31
PPM1F-209ENST00000497072 FAM47DPA6NHR8 397 aa13.1□□□□□ -0.31
PPM1F-209ENST00000497072 LRRC72A6NJI9 287 aa13.1□□□□□ -0.31
PPM1F-209ENST00000497072 FOXN3O00409 490 aaPredicted RBP13.1□□□□□ -0.31
PPM1F-209ENST00000497072 SH3BP5O60239 455 aa13.1□□□□□ -0.31
PPM1F-209ENST00000497072 SIN3BO75182 1162 aa13.1□□□□□ -0.31
PPM1F-209ENST00000497072 GRAP2O75791 330 aa13.1□□□□□ -0.31
PPM1F-209ENST00000497072 IGLV3-25P01717 112 aa13.1□□□□□ -0.31
PPM1F-209ENST00000497072 CD59P13987 128 aa13.1□□□□□ -0.31
PPM1F-209ENST00000497072 NOS2P35228 1153 aa13.1□□□□□ -0.31
PPM1F-209ENST00000497072 SLC6A3Q01959 620 aa13.1□□□□□ -0.31
PPM1F-209ENST00000497072 NME3Q13232 169 aa13.1□□□□□ -0.31
PPM1F-209ENST00000497072 SUZ12Q15022 739 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms