RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 PLA2G4BP0C869 781 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 MYCLP1P12525 358 aaPredicted RBP5.05□□□□□ -1.6
CSTF1-205ENST00000490539 CR2P20023 1033 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 PTX3P26022 381 aaPredicted RBP5.05□□□□□ -1.6
CSTF1-205ENST00000490539 MARCKSP29966 332 aaPredicted RBP5.05□□□□□ -1.6
CSTF1-205ENST00000490539 CTNNB1P35222 781 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 PPM1AP35813 382 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 MATR3P43243 847 aaKnown RBP eCLIP5.05□□□□□ -1.6
CSTF1-205ENST00000490539 SYKP43405 635 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 UBASH3AP57075 661 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 PTENP60484 403 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 DEFB103AP81534 67 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 MYL5Q02045 173 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 PRPF4BQ13523 1007 aaKnown RBP5.05□□□□□ -1.6
CSTF1-205ENST00000490539 PCOLCEQ15113 449 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 KYAT1Q16773 422 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 AAK1Q2M2I8 961 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 TRIM68Q6AZZ1 485 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 SLC27A1Q6PCB7 646 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 KLHDC10Q6PID8 442 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 SYT10Q6XYQ8 523 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.05□□□□□ -1.6
CSTF1-205ENST00000490539 ZNF662Q6ZS27 426 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 TAX1BP1Q86VP1 789 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 FAM228AQ86W67 206 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 VSTM4Q8IW00 320 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 CMTR2Q8IYT2 770 aaKnown RBP5.05□□□□□ -1.6
CSTF1-205ENST00000490539 LRRC43Q8N309 656 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 NXPE1Q8N323 547 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 C4orf32Q8N8J7 132 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 IQUBQ8NA54 791 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 CCDC47Q96A33 483 aaKnown RBP5.05□□□□□ -1.6
CSTF1-205ENST00000490539 ZBTB10Q96DT7 871 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 BICD1Q96G01 975 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 ZNF668Q96K58 619 aaPredicted RBP5.05□□□□□ -1.6
CSTF1-205ENST00000490539 C16orf92Q96LL3 132 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 RPS6KC1Q96S38 1066 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 TCHPQ9BT92 498 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 CCSER1Q9C0I3 900 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 SEMA4AQ9H3S1 761 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 CUEDC2Q9H467 287 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 AGO3Q9H9G7 860 aaKnown RBP5.05□□□□□ -1.6
CSTF1-205ENST00000490539 ERVK-5Q9HDB9 667 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 KMT5AQ9NQR1 393 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 ARGLU1Q9NWB6 273 aaPredicted RBP5.05□□□□□ -1.6
CSTF1-205ENST00000490539 USP36Q9P275 1121 aaKnown RBP5.05□□□□□ -1.6
CSTF1-205ENST00000490539 WRAP73Q9P2S5 460 aaPredicted RBP5.05□□□□□ -1.6
CSTF1-205ENST00000490539 DNAI1Q9UI46 699 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 HOOK1Q9UJC3 728 aaKnown RBP5.05□□□□□ -1.6
CSTF1-205ENST00000490539 ODF2LQ9ULJ1 636 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 MAPRE3Q9UPY8 281 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 CACNA1HO95180 2353 aa5.05□□□□□ -1.6
CSTF1-205ENST00000490539 CNTNAP2Q9UHC6 1331 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 LOXHD1Q8IVV2 1947 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 GOLGA6L9A6NEM1 432 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 TBKBP1A7MCY6 615 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 EFCAB8A8MWE9 144 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 E9PMD0 336 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 DAPK3O43293 454 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 ZSCAN12O43309 604 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 NCK2O43639 380 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 CDC14BO60729 498 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 KRT38O76015 456 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 STBD1O95210 358 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 SRGAP2BP0DMP2 458 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 GAP43P17677 238 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 LAG3P18627 525 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 CDC25AP30304 524 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 LSP1P33241 339 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 ARL2P36404 184 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 RPS19P39019 145 aaKnown RBP5.04□□□□□ -1.6
CSTF1-205ENST00000490539 GYS2P54840 703 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 PEX3P56589 373 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 HTRA4P83105 476 aaPredicted RBP5.04□□□□□ -1.6
CSTF1-205ENST00000490539 DSG1Q02413 1049 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 TAP1Q03518 808 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 ADCY2Q08462 1091 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 CAPSQ13938 189 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 NFYCQ13952 458 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 LRRC32Q14392 662 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 GPNMBQ14956 572 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 PTPAQ15257 358 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 ERCC6LQ2NKX8 1250 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 DCAF4L1Q3SXM0 396 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 HYIQ5T013 277 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 RNF187Q5TA31 235 aaPredicted RBP5.04□□□□□ -1.6
CSTF1-205ENST00000490539 RESP18Q5W5W9 173 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 TRIM65Q6PJ69 517 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 GPBP1Q86WP2 473 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 ECHDC2Q86YB7 292 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 CCDC65Q8IXS2 484 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 THNSL1Q8IYQ7 743 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 MYCT1Q8N699 235 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 LINC01465Q8N7H1 131 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 SYT2Q8N9I0 419 aaPredicted RBP5.04□□□□□ -1.6
CSTF1-205ENST00000490539 CHTF18Q8WVB6 975 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 PPM1EQ8WY54 764 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 LARP4BQ92615 738 aaKnown RBP5.04□□□□□ -1.6
CSTF1-205ENST00000490539 RAD54LQ92698 747 aa5.04□□□□□ -1.6
CSTF1-205ENST00000490539 GCDHQ92947 438 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms