RNA–Protein interactions for RNA: ENST00000489906.5

VDAC1-206, Transcript of voltage dependent anion channel 1, humanhuman

TSL 2

Gene VDAC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC1-206ENST00000489906 CST6Q15828 149 aa13.1□□□□□ -0.31
VDAC1-206ENST00000489906 NFIL3Q16649 462 aa13.1□□□□□ -0.31
VDAC1-206ENST00000489906 INAVAQ3KP66 663 aa13.1□□□□□ -0.31
VDAC1-206ENST00000489906 ZCWPW2Q504Y3 356 aa13.1□□□□□ -0.31
VDAC1-206ENST00000489906 FSCBQ5H9T9 825 aa13.1□□□□□ -0.31
VDAC1-206ENST00000489906 SCUBE3Q8IX30 993 aa13.1□□□□□ -0.31
VDAC1-206ENST00000489906 GUF1Q8N442 669 aaKnown RBP13.1□□□□□ -0.31
VDAC1-206ENST00000489906 TTC39CQ8N584 583 aa13.1□□□□□ -0.31
VDAC1-206ENST00000489906 ENGASEQ8NFI3 743 aa13.1□□□□□ -0.31
VDAC1-206ENST00000489906 ADAM32Q8TC27 787 aa13.1□□□□□ -0.31
VDAC1-206ENST00000489906 TFAP2BQ92481 460 aa13.1□□□□□ -0.31
VDAC1-206ENST00000489906 MYO19Q96H55 970 aa13.1□□□□□ -0.31
VDAC1-206ENST00000489906 ELF4Q99607 663 aaPredicted RBP13.1□□□□□ -0.31
VDAC1-206ENST00000489906 OMDQ99983 421 aa13.1□□□□□ -0.31
VDAC1-206ENST00000489906 MIS12Q9H081 205 aa13.1□□□□□ -0.31
VDAC1-206ENST00000489906 ABCC13Q9NSE7 274 aa13.1□□□□□ -0.31
VDAC1-206ENST00000489906 STOML2Q9UJZ1 356 aa13.1□□□□□ -0.31
VDAC1-206ENST00000489906 INTS6Q9UL03 887 aaKnown RBP13.1□□□□□ -0.31
VDAC1-206ENST00000489906 CEP83Q9Y592 693 aa13.1□□□□□ -0.31
VDAC1-206ENST00000489906 ASH1LQ9NR48 2969 aaKnown RBP13.1□□□□□ -0.31
VDAC1-206ENST00000489906 SHROOM3Q8TF72 1996 aa13.09□□□□□ -0.31
VDAC1-206ENST00000489906 A0A1W2PPC4 97 aa13.09□□□□□ -0.31
VDAC1-206ENST00000489906 O00370 1275 aa13.09□□□□□ -0.31
VDAC1-206ENST00000489906 VILLO15195 856 aa13.09□□□□□ -0.31
VDAC1-206ENST00000489906 TLX3O43711 291 aaPredicted RBP13.09□□□□□ -0.31
VDAC1-206ENST00000489906 ACSL4O60488 711 aa13.09□□□□□ -0.31
VDAC1-206ENST00000489906 MOCS2O96007 188 aaPredicted RBP13.09□□□□□ -0.31
VDAC1-206ENST00000489906 CENPBP07199 599 aaPredicted RBP13.09□□□□□ -0.31
VDAC1-206ENST00000489906 EIF2S3P41091 472 aaKnown RBP13.09□□□□□ -0.31
VDAC1-206ENST00000489906 SLC11A2P49281 568 aa13.09□□□□□ -0.31
VDAC1-206ENST00000489906 BNIP3Q12983 259 aa13.09□□□□□ -0.31
VDAC1-206ENST00000489906 TARDBPQ13148 414 aaKnown RBP eCLIP13.09□□□□□ -0.31
VDAC1-206ENST00000489906 HNRNPA1L2Q32P51 320 aaKnown RBP13.09□□□□□ -0.31
VDAC1-206ENST00000489906 ATL3Q6DD88 541 aa13.09□□□□□ -0.31
VDAC1-206ENST00000489906 PMF1Q6P1K2 205 aa13.09□□□□□ -0.31
VDAC1-206ENST00000489906 HSCBQ8IWL3 235 aa13.09□□□□□ -0.31
VDAC1-206ENST00000489906 GOLGA1Q92805 767 aa13.09□□□□□ -0.31
VDAC1-206ENST00000489906 LMLNQ96KR4 655 aa13.09□□□□□ -0.31
VDAC1-206ENST00000489906 MRGPRX3Q96LB0 322 aa13.09□□□□□ -0.31
VDAC1-206ENST00000489906 SPATA32Q96LK8 384 aa13.09□□□□□ -0.31
VDAC1-206ENST00000489906 NUCKS1Q9H1E3 243 aaKnown RBP13.09□□□□□ -0.31
VDAC1-206ENST00000489906 GOLPH3LQ9H4A5 285 aa13.09□□□□□ -0.31
VDAC1-206ENST00000489906 FBRSQ9HAH7 460 aa13.09□□□□□ -0.31
VDAC1-206ENST00000489906 USP25Q9UHP3 1055 aa13.09□□□□□ -0.31
VDAC1-206ENST00000489906 SLCO3A1Q9UIG8 710 aa13.09□□□□□ -0.31
VDAC1-206ENST00000489906 RAI2Q9Y5P3 530 aa13.09□□□□□ -0.31
VDAC1-206ENST00000489906 TENM4Q6N022 2769 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 LRRC72A6NJI9 287 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 M0QYV0 167 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 CETN3O15182 167 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 RNASEH1O60930 286 aaKnown RBP13.08□□□□□ -0.32
VDAC1-206ENST00000489906 RFPL3O75679 317 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 LATS1O95835 1130 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 MYL1P05976 194 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 VAV1P15498 845 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 BRD2P25440 801 aaKnown RBP13.08□□□□□ -0.32
VDAC1-206ENST00000489906 CD38P28907 300 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 SLC8A1P32418 973 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 STK19P49842 368 aaPredicted RBP13.08□□□□□ -0.32
VDAC1-206ENST00000489906 METAP1P53582 386 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 ZNF445P59923 1031 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 PPP2CBP62714 309 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 PPP2CAP67775 309 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 CDH18Q13634 790 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 PITRM1Q5JRX3 1037 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 C9orf64Q5T6V5 341 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 HES3Q5TGS1 186 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 TMEM270Q6UE05 265 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 KRBA2Q6ZNG9 492 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 USP30Q70CQ3 517 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 TMPRSS12Q86WS5 348 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 STK40Q8N2I9 435 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 AADATQ8N5Z0 425 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 HJURPQ8NCD3 748 aaPredicted RBP13.08□□□□□ -0.32
VDAC1-206ENST00000489906 OR14C36Q8NHC7 312 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 SAP25Q8TEE9 199 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 KAT5Q92993 513 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 NXPE2Q96DL1 559 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 SERAC1Q96JX3 654 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 RPL10LQ96L21 214 aaKnown RBP13.08□□□□□ -0.32
VDAC1-206ENST00000489906 ZSWIM1Q9BR11 485 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 CNGB3Q9NQW8 809 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 GDF3Q9NR23 364 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 XPO7Q9UIA9 1087 aaKnown RBP13.08□□□□□ -0.32
VDAC1-206ENST00000489906 ERVW-1Q9UQF0 538 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 MGAQ8IWI9 3026 aa13.08□□□□□ -0.32
VDAC1-206ENST00000489906 STX10O60499 249 aa13.07□□□□□ -0.32
VDAC1-206ENST00000489906 SDC3O75056 442 aa13.07□□□□□ -0.32
VDAC1-206ENST00000489906 IGLV3-27P01718 113 aa13.07□□□□□ -0.32
VDAC1-206ENST00000489906 LTFP02788 710 aa13.07□□□□□ -0.32
VDAC1-206ENST00000489906 SETSIPP0DME0 302 aa13.07□□□□□ -0.32
VDAC1-206ENST00000489906 VDRP11473 427 aa13.07□□□□□ -0.32
VDAC1-206ENST00000489906 EPHA8P29322 1005 aaPredicted RBP13.07□□□□□ -0.32
VDAC1-206ENST00000489906 MAT2AP31153 395 aaKnown RBP13.07□□□□□ -0.32
VDAC1-206ENST00000489906 HNF1BP35680 557 aa13.07□□□□□ -0.32
VDAC1-206ENST00000489906 ACADVLP49748 655 aa13.07□□□□□ -0.32
VDAC1-206ENST00000489906 ENPEPQ07075 957 aa13.07□□□□□ -0.32
VDAC1-206ENST00000489906 POM121L1PQ3SYA9 428 aa13.07□□□□□ -0.32
VDAC1-206ENST00000489906 DCAF6Q58WW2 860 aa13.07□□□□□ -0.32
VDAC1-206ENST00000489906 C6orf118Q5T5N4 469 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms