RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 PIK3R6Q5UE93 754 aa16.82■□□□□ 0.28
USP48-210ENST00000489108 CEP135Q66GS9 1140 aa16.82■□□□□ 0.28
USP48-210ENST00000489108 OXR1Q8N573 874 aa16.82■□□□□ 0.28
USP48-210ENST00000489108 LINC00301Q8NCQ3 95 aa16.82■□□□□ 0.28
USP48-210ENST00000489108 OR14C36Q8NHC7 312 aa16.82■□□□□ 0.28
USP48-210ENST00000489108 TAS1R2Q8TE23 839 aa16.82■□□□□ 0.28
USP48-210ENST00000489108 EDEM1Q92611 657 aa16.82■□□□□ 0.28
USP48-210ENST00000489108 HIC2Q96JB3 615 aa16.82■□□□□ 0.28
USP48-210ENST00000489108 LMLNQ96KR4 655 aa16.82■□□□□ 0.28
USP48-210ENST00000489108 MRGPRX3Q96LB0 322 aa16.82■□□□□ 0.28
USP48-210ENST00000489108 ZNF578Q96N58 590 aaPredicted RBP16.82■□□□□ 0.28
USP48-210ENST00000489108 IMPG2Q9BZV3 1241 aa16.82■□□□□ 0.28
USP48-210ENST00000489108 DNAI2Q9GZS0 605 aa16.82■□□□□ 0.28
USP48-210ENST00000489108 NIF3L1Q9GZT8 377 aa16.82■□□□□ 0.28
USP48-210ENST00000489108 OLA1Q9NTK5 396 aaKnown RBP16.82■□□□□ 0.28
USP48-210ENST00000489108 STIM2Q9P246 746 aa16.82■□□□□ 0.28
USP48-210ENST00000489108 FZD4Q9ULV1 537 aa16.82■□□□□ 0.28
USP48-210ENST00000489108 DOCK9Q9BZ29 2069 aa16.82■□□□□ 0.28
USP48-210ENST00000489108 TULP2O00295 520 aa16.81■□□□□ 0.28
USP48-210ENST00000489108 TRIM38O00635 465 aa16.81■□□□□ 0.28
USP48-210ENST00000489108 SPTLC2O15270 562 aa16.81■□□□□ 0.28
USP48-210ENST00000489108 POLR2DO15514 142 aaKnown RBP16.81■□□□□ 0.28
USP48-210ENST00000489108 MSI1O43347 362 aaKnown RBP16.81■□□□□ 0.28
USP48-210ENST00000489108 SIGLEC6O43699 453 aa16.81■□□□□ 0.28
USP48-210ENST00000489108 SDC3O75056 442 aa16.81■□□□□ 0.28
USP48-210ENST00000489108 LATS1O95835 1130 aa16.81■□□□□ 0.28
USP48-210ENST00000489108 NR3C1P04150 777 aa16.81■□□□□ 0.28
USP48-210ENST00000489108 MPOP05164 745 aa16.81■□□□□ 0.28
USP48-210ENST00000489108 GOT1P17174 413 aa16.81■□□□□ 0.28
USP48-210ENST00000489108 CSKP41240 450 aa16.81■□□□□ 0.28
USP48-210ENST00000489108 AFMP43652 599 aa16.81■□□□□ 0.28
USP48-210ENST00000489108 GCLMP48507 274 aa16.81■□□□□ 0.28
USP48-210ENST00000489108 UCNP55089 124 aa16.81■□□□□ 0.28
USP48-210ENST00000489108 STK4Q13043 487 aa16.81■□□□□ 0.28
USP48-210ENST00000489108 CUL4AQ13619 759 aa16.81■□□□□ 0.28
USP48-210ENST00000489108 SHC4Q6S5L8 630 aa16.81■□□□□ 0.28
USP48-210ENST00000489108 SND1Q7KZF4 910 aaKnown RBP eCLIP16.81■□□□□ 0.28
USP48-210ENST00000489108 AADATQ8N5Z0 425 aa16.81■□□□□ 0.28
USP48-210ENST00000489108 MFSD2AQ8NA29 543 aa16.81■□□□□ 0.28
USP48-210ENST00000489108 SLC4A11Q8NBS3 891 aa16.81■□□□□ 0.28
USP48-210ENST00000489108 RNF139Q8WU17 664 aa16.81■□□□□ 0.28
USP48-210ENST00000489108 TMEM174Q8WUU8 243 aa16.81■□□□□ 0.28
USP48-210ENST00000489108 TTC9Q92623 222 aa16.81■□□□□ 0.28
USP48-210ENST00000489108 FAM129BQ96TA1 746 aa16.81■□□□□ 0.28
USP48-210ENST00000489108 INTS6Q9UL03 887 aaKnown RBP16.81■□□□□ 0.28
USP48-210ENST00000489108 TBC1D3DA0A087WVF3 549 aa16.8■□□□□ 0.28
USP48-210ENST00000489108 TBC1D3IA0A087WXS9 549 aa16.8■□□□□ 0.28
USP48-210ENST00000489108 TBC1D3EA0A087X179 549 aa16.8■□□□□ 0.28
USP48-210ENST00000489108 TBC1D3KA0A087X1G2 549 aa16.8■□□□□ 0.28
USP48-210ENST00000489108 TBC1D3FA6NER0 549 aaPredicted RBP16.8■□□□□ 0.28
USP48-210ENST00000489108 TTC34A8MYJ7 566 aa16.8■□□□□ 0.28
USP48-210ENST00000489108 TBC1D3LB9A6J9 549 aa16.8■□□□□ 0.28
USP48-210ENST00000489108 TBC1D3HP0C7X1 549 aa16.8■□□□□ 0.28
USP48-210ENST00000489108 KRT10P13645 584 aa16.8■□□□□ 0.28
USP48-210ENST00000489108 SLC6A4P31645 630 aa16.8■□□□□ 0.28
USP48-210ENST00000489108 PSMD8P48556 350 aa16.8■□□□□ 0.28
USP48-210ENST00000489108 VAMP7P51809 220 aa16.8■□□□□ 0.28
USP48-210ENST00000489108 ADPRHP54922 357 aa16.8■□□□□ 0.28
USP48-210ENST00000489108 PPP2CBP62714 309 aa16.8■□□□□ 0.28
USP48-210ENST00000489108 PPP2CAP67775 309 aa16.8■□□□□ 0.28
USP48-210ENST00000489108 MPP7Q5T2T1 576 aa16.8■□□□□ 0.28
USP48-210ENST00000489108 BSPRYQ5W0U4 402 aa16.8■□□□□ 0.28
USP48-210ENST00000489108 TBC1D3GQ6DHY5 549 aa16.8■□□□□ 0.28
USP48-210ENST00000489108 TBC1D3CQ6IPX1 549 aa16.8■□□□□ 0.28
USP48-210ENST00000489108 TBC1D3Q8IZP1 549 aaPredicted RBP16.8■□□□□ 0.28
USP48-210ENST00000489108 ANKRD52Q8NB46 1076 aa16.8■□□□□ 0.28
USP48-210ENST00000489108 FIBINQ8TAL6 211 aa16.8■□□□□ 0.28
USP48-210ENST00000489108 KCTD10Q9H3F6 313 aa16.8■□□□□ 0.28
USP48-210ENST00000489108 TARSL2A2RTX5 802 aaKnown RBP16.79■□□□□ 0.28
USP48-210ENST00000489108 KLK10O43240 276 aa16.79■□□□□ 0.28
USP48-210ENST00000489108 LATO43561 262 aa16.79■□□□□ 0.28
USP48-210ENST00000489108 PPP6R2O75170 966 aa16.79■□□□□ 0.28
USP48-210ENST00000489108 WISP1O95388 367 aa16.79■□□□□ 0.28
USP48-210ENST00000489108 ASLP04424 464 aa16.79■□□□□ 0.28
USP48-210ENST00000489108 TRIM49P0CI25 452 aa16.79■□□□□ 0.28
USP48-210ENST00000489108 TRIM49CP0CI26 452 aa16.79■□□□□ 0.28
USP48-210ENST00000489108 CTSOP43234 321 aaPredicted RBP16.79■□□□□ 0.28
USP48-210ENST00000489108 RAD23BP54727 409 aa16.79■□□□□ 0.28
USP48-210ENST00000489108 GABREP78334 506 aa16.79■□□□□ 0.28
USP48-210ENST00000489108 PPP3CAQ08209 521 aa16.79■□□□□ 0.28
USP48-210ENST00000489108 ZNF211Q13398 564 aaPredicted RBP16.79■□□□□ 0.28
USP48-210ENST00000489108 ARID5BQ14865 1188 aa16.79■□□□□ 0.28
USP48-210ENST00000489108 NAPEPLDQ6IQ20 393 aa16.79■□□□□ 0.28
USP48-210ENST00000489108 PRPF39Q86UA1 669 aaKnown RBP16.79■□□□□ 0.28
USP48-210ENST00000489108 MFN1Q8IWA4 741 aa16.79■□□□□ 0.28
USP48-210ENST00000489108 GRAMD1CQ8IYS0 662 aa16.79■□□□□ 0.28
USP48-210ENST00000489108 STK40Q8N2I9 435 aa16.79■□□□□ 0.28
USP48-210ENST00000489108 SLC25A45Q8N413 288 aa16.79■□□□□ 0.28
USP48-210ENST00000489108 KIAA0895Q8NCT3 520 aa16.79■□□□□ 0.28
USP48-210ENST00000489108 MMRN2Q9H8L6 949 aa16.79■□□□□ 0.28
USP48-210ENST00000489108 MAGEF1Q9HAY2 307 aa16.79■□□□□ 0.28
USP48-210ENST00000489108 ARHGAP20Q9P2F6 1191 aa16.79■□□□□ 0.28
USP48-210ENST00000489108 SLCO3A1Q9UIG8 710 aa16.79■□□□□ 0.28
USP48-210ENST00000489108 ERVW-1Q9UQF0 538 aa16.79■□□□□ 0.28
USP48-210ENST00000489108 MTMR6Q9Y217 621 aa16.79■□□□□ 0.28
USP48-210ENST00000489108 FRMD4BQ9Y2L6 1034 aa16.79■□□□□ 0.28
USP48-210ENST00000489108 TDRD6O60522 2096 aaKnown RBP16.79■□□□□ 0.28
USP48-210ENST00000489108 SPTA1P02549 2419 aa16.78■□□□□ 0.28
USP48-210ENST00000489108 YJEFN3A6XGL0 299 aa16.78■□□□□ 0.28
USP48-210ENST00000489108 E7ENQ6 273 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms