RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 PICALMQ13492 652 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 BMPR2Q13873 1038 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 SLC39A14Q15043 492 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 IQCB1Q15051 598 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 MINDY4Q4G0A6 757 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 ARHGAP29Q52LW3 1261 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 COBLL1Q53SF7 1204 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 RILPL1Q5EBL4 403 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 ISM2Q6H9L7 571 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 CXorf57Q6NSI4 855 aaKnown RBP3.17□□□□□ -1.9
CALD1-221ENST00000489019 NPNTQ6UXI9 565 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 ZNF788Q6ZQV5 615 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 C11orf57Q6ZUT1 292 aaPredicted RBP3.17□□□□□ -1.9
CALD1-221ENST00000489019 KRT27Q7Z3Y8 459 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.17□□□□□ -1.9
CALD1-221ENST00000489019 ADGRA1Q86SQ6 560 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 DAAM2Q86T65 1068 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 ZNF280BQ86YH2 543 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 RASAL3Q86YV0 1011 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 DIS3L2Q8IYB7 885 aaKnown RBP3.17□□□□□ -1.9
CALD1-221ENST00000489019 ZNF444Q8N0Y2 327 aaPredicted RBP3.17□□□□□ -1.9
CALD1-221ENST00000489019 CNNM3Q8NE01 707 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 VPS37AQ8NEZ2 397 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 PIBF1Q8WXW3 757 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 NELL1Q92832 810 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 NSUN4Q96CB9 384 aaKnown RBP3.17□□□□□ -1.9
CALD1-221ENST00000489019 CCDC34Q96HJ3 373 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 HAPLN3Q96S86 360 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 RIOK1Q9BRS2 568 aaKnown RBP3.17□□□□□ -1.9
CALD1-221ENST00000489019 B3GNT5Q9BYG0 378 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 TRIM54Q9BYV2 358 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 ZNF700Q9H0M5 742 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 ZNF287Q9HBT7 754 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 PTPRHQ9HD43 1115 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 ADARB2Q9NS39 739 aaKnown RBP3.17□□□□□ -1.9
CALD1-221ENST00000489019 ATP8A2Q9NTI2 1148 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 SERTAD4Q9NUC0 356 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 PIH1D1Q9NWS0 290 aaKnown RBP3.17□□□□□ -1.9
CALD1-221ENST00000489019 MCM9Q9NXL9 1143 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 XPR1Q9UBH6 696 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 CLIP2Q9UDT6 1046 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 ANAPC4Q9UJX5 808 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 KCNJ14Q9UNX9 436 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 FRMD4BQ9Y2L6 1034 aa3.17□□□□□ -1.9
CALD1-221ENST00000489019 MYO5AQ9Y4I1 1855 aaKnown RBP3.17□□□□□ -1.9
CALD1-221ENST00000489019 PDS5AQ29RF7 1337 aaKnown RBP3.17□□□□□ -1.9
CALD1-221ENST00000489019 COL1A1P02452 1464 aaPredicted RBP3.16□□□□□ -1.9
CALD1-221ENST00000489019 A0A1B0GUL6 1792 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 CASZ1Q86V15 1759 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 hCG_1642624A0A1W2PR95 340 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 CGB1A6NKQ9 187 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 A6NNZ2 444 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 HMGB1P1B2RPK0 211 aaPredicted RBP3.16□□□□□ -1.9
CALD1-221ENST00000489019 BTBD18B2RXH4 712 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 hCG_1984214I3L0E3 225 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 ORC4O43929 436 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 SMC2O95347 1197 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 PLEKHA8P1O95397 391 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 TTLL1O95922 423 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 SERPINC1P01008 464 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 TPM2P07951 284 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 ATXN1LP0C7T5 689 aaKnown RBP3.16□□□□□ -1.9
CALD1-221ENST00000489019 EBLN1P0CF75 366 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 CYP2D6P10635 497 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 GYS1P13807 737 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 GPD1P21695 349 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 DRD4P21917 467 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 U2AF2P26368 475 aaKnown RBP eCLIP3.16□□□□□ -1.9
CALD1-221ENST00000489019 TM4SF1P30408 202 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 HSPA1LP34931 641 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 LIPAP38571 399 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 VIPR2P41587 438 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 BTDP43251 543 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 GNAQP50148 359 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 CLCN2P51788 898 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 ZNF75DP51815 510 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 GPSM2P81274 684 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 TFAP4Q01664 338 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 CTBP1Q13363 440 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 GRM3Q14832 879 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 GRAMD1BQ3KR37 738 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 ZIK1Q3SY52 487 aaPredicted RBP3.16□□□□□ -1.9
CALD1-221ENST00000489019 SBK1Q52WX2 424 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 SPECC1Q5M775 1068 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 ARHGAP40Q5TG30 622 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 ICE2Q659A1 982 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 SFRP4Q6FHJ7 346 aaPredicted RBP3.16□□□□□ -1.9
CALD1-221ENST00000489019 PRR5LQ6MZQ0 368 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 LAYNQ6UX15 382 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 RBM43Q6ZSC3 357 aaKnown RBP3.16□□□□□ -1.9
CALD1-221ENST00000489019 CCDC186Q7Z3E2 898 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 DTX2Q86UW9 622 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 TEX11Q8IYF3 940 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 SPICE1Q8N0Z3 855 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 ENAHQ8N8S7 591 aaPredicted RBP3.16□□□□□ -1.9
CALD1-221ENST00000489019 ENGASEQ8NFI3 743 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 PJA1Q8NG27 643 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 TDRD7Q8NHU6 1098 aaKnown RBP3.16□□□□□ -1.9
CALD1-221ENST00000489019 ATG4AQ8WYN0 398 aa3.16□□□□□ -1.9
CALD1-221ENST00000489019 DPF1Q92782 380 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms