RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 CHST9Q7L1S5 443 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 TMTC1Q8IUR5 882 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 C1orf210Q8IVY1 113 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 CCDC170Q8IYT3 715 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 CCAR2Q8N163 923 aaKnown RBP12.22□□□□□ -0.45
HPS4-214ENST00000485842 PYROXD2Q8N2H3 581 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 ALLCQ8N6M5 410 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 CCDC26Q8TAB7 109 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 USP33Q8TEY7 942 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 NTAN1Q96AB6 310 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 ACDQ96AP0 544 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 IER2Q9BTL4 223 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 MAGEB5Q9BZ81 275 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 GPATCH2LQ9NWQ4 482 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 C2orf42Q9NWW7 574 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 MPP6Q9NZW5 540 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 PCSK1NQ9UHG2 260 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 HCN4Q9Y3Q4 1203 aa12.22□□□□□ -0.45
HPS4-214ENST00000485842 A0A0A0MRY4 1105 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.21□□□□□ -0.45
HPS4-214ENST00000485842 TMEM110-MUSTN1A8MSY1 372 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 PRPSAP2O60256 369 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 ATG13O75143 517 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 LRCH4O75427 683 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 CNTN5O94779 1100 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 FECHP22830 423 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 MIPP30301 263 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 WASP42768 502 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 SSR1P43307 286 aaKnown RBP12.21□□□□□ -0.45
HPS4-214ENST00000485842 MAGEA1P43355 309 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 KIR2DL1P43626 348 aaPredicted RBP12.21□□□□□ -0.45
HPS4-214ENST00000485842 CXCL12P48061 93 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 CCR3P51677 355 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 NUBP1P53384 320 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 MRPS21P82921 87 aaKnown RBP12.21□□□□□ -0.45
HPS4-214ENST00000485842 SCAPQ12770 1279 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 ZNF177Q13360 481 aaPredicted RBP12.21□□□□□ -0.45
HPS4-214ENST00000485842 SPA17Q15506 151 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 ALFQ53S48 1182 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 FSCBQ5H9T9 825 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 ACBD5Q5T8D3 534 aaPredicted RBP12.21□□□□□ -0.45
HPS4-214ENST00000485842 RWDD4Q6NW29 188 aaKnown RBP12.21□□□□□ -0.45
HPS4-214ENST00000485842 TFAP2DQ7Z6R9 452 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 ZNF683Q8IZ20 524 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 AHI1Q8N157 1196 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 ARFGAP1Q8N6T3 406 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.21□□□□□ -0.45
HPS4-214ENST00000485842 ZNF557Q8N988 423 aaPredicted RBP12.21□□□□□ -0.45
HPS4-214ENST00000485842 IL17RCQ8NAC3 791 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 TXNDC5Q8NBS9 432 aaKnown RBP12.21□□□□□ -0.45
HPS4-214ENST00000485842 PRSS33Q8NF86 280 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 FIBINQ8TAL6 211 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 WFIKKN2Q8TEU8 576 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 UCMAQ8WVF2 138 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 SORCS1Q8WY21 1168 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 C1orf74Q96LT6 269 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 PEBP4Q96S96 227 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 BAG1Q99933 345 aaPredicted RBP12.21□□□□□ -0.45
HPS4-214ENST00000485842 POLR3BQ9NW08 1133 aaPredicted RBP12.21□□□□□ -0.45
HPS4-214ENST00000485842 UVRAGQ9P2Y5 699 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 OR12D3Q9UGF7 316 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 IP6K2Q9UHH9 426 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 RAPGEFL1Q9UHV5 662 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 FZD10Q9ULW2 581 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 AP4E1Q9UPM8 1137 aa12.21□□□□□ -0.45
HPS4-214ENST00000485842 CACNA1IQ9P0X4 2223 aa12.21□□□□□ -0.46
HPS4-214ENST00000485842 MYO18AQ92614 2054 aaKnown RBP12.2□□□□□ -0.46
HPS4-214ENST00000485842 DOCK4Q8N1I0 1966 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 CHURC1-FNTBB4DL54 471 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 FAM72CH0Y354 149 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 H0Y858 1186 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 MYO1FO00160 1098 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 CREB3O43889 395 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 CLDN11O75508 207 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 NDUFA10O95299 355 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 IPO7O95373 1038 aaKnown RBP12.2□□□□□ -0.46
HPS4-214ENST00000485842 CHRM1P11229 460 aaPredicted RBP12.2□□□□□ -0.46
HPS4-214ENST00000485842 COL9A1P20849 921 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 GJC1P36383 396 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 CSKP41240 450 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 CDH4P55283 916 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 GSDMDP57764 484 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 CSTF1Q05048 431 aaKnown RBP12.2□□□□□ -0.46
HPS4-214ENST00000485842 PIGHQ14442 188 aaPredicted RBP12.2□□□□□ -0.46
HPS4-214ENST00000485842 DMC1Q14565 340 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 EIF4HQ15056 248 aaKnown RBP12.2□□□□□ -0.46
HPS4-214ENST00000485842 FUT11Q495W5 492 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 FAM72AQ5TYM5 149 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 TMEM215Q68D42 235 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 MBLAC2Q68D91 279 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 FAM72DQ6L9T8 149 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 TSSK4Q6SA08 328 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 RAD9BQ6WBX8 426 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 FAM72BQ86X60 149 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 CHPFQ8IZ52 775 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 CYB5D2Q8WUJ1 264 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 RFFLQ8WZ73 363 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 TBC1D31Q96DN5 1066 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 ERLEC1Q96DZ1 483 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 ACOX2Q99424 681 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms