RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 DRD1P21728 446 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 SOX9P48436 509 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 PPP3CCP48454 512 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 FNTBP49356 437 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 PDE6CP51160 858 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 LIMK1P53667 647 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 RBP5P82980 135 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 TFAMQ00059 246 aaKnown RBP6.9□□□□□ -1.3
LRCH3-216ENST00000481048 CLCQ05315 142 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 MYO1EQ12965 1108 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 RUNX3Q13761 415 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 TMEM196Q5HYL7 178 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 FAM171BQ6P995 826 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 VSTM1Q6UX27 236 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 RPTNQ6XPR3 784 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 C4orf50Q6ZRC1 276 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 STXBP4Q6ZWJ1 553 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 CACNA2D4Q7Z3S7 1137 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 TMEM150AQ86TG1 271 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 SYCP3Q8IZU3 236 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 PDCL2Q8N4E4 241 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 CSGALNACT2Q8N6G5 542 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 MAB21L3Q8N8X9 362 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 FSIP1Q8NA03 581 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 GIPC2Q8TF65 315 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 ANKRD36BP1Q96IX9 119 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 FAM213AQ9BRX8 229 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 ZSCAN16Q9H4T2 348 aaPredicted RBP6.9□□□□□ -1.3
LRCH3-216ENST00000481048 KIAA1586Q9HCI6 787 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 SEMA4GQ9NTN9 838 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 RBM12Q9NTZ6 932 aaKnown RBP6.9□□□□□ -1.3
LRCH3-216ENST00000481048 DDX43Q9NXZ2 648 aaKnown RBP6.9□□□□□ -1.3
LRCH3-216ENST00000481048 EHD2Q9NZN4 543 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 IMPACTQ9P2X3 320 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 FBXO2Q9UK22 296 aaPredicted RBP6.9□□□□□ -1.3
LRCH3-216ENST00000481048 AGAP1Q9UPQ3 857 aa6.9□□□□□ -1.3
LRCH3-216ENST00000481048 KNL1Q8NG31 2342 aa6.9□□□□□ -1.31
LRCH3-216ENST00000481048 KIAA1549LQ6ZVL6 1849 aa6.9□□□□□ -1.31
LRCH3-216ENST00000481048 KNTC1P50748 2209 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 CACNA1EQ15878 2313 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 ZC3H12DA2A288 527 aaKnown RBP6.89□□□□□ -1.31
LRCH3-216ENST00000481048 ZNF233A6NK53 670 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 TISP43B9A030 160 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 NOL4O94818 638 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 GCNT3O95395 438 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 ITGB3P05106 788 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 IDEP14735 1019 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 MAGEA11P43364 429 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 SNRPFP62306 86 aaKnown RBP6.89□□□□□ -1.31
LRCH3-216ENST00000481048 NFKB2Q00653 900 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 AMPD3Q01432 767 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 SLC39A14Q15043 492 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 TXNDC8Q6A555 127 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 CRTC3Q6UUV7 619 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 Q6ZS52 159 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 USP49Q70CQ1 688 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 CEP68Q76N32 757 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 LIMS2Q7Z4I7 341 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.89□□□□□ -1.31
LRCH3-216ENST00000481048 GGNQ86UU5 652 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 CCDC65Q8IXS2 484 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 GPD1LQ8N335 351 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 TP53I13Q8NBR0 393 aaPredicted RBP6.89□□□□□ -1.31
LRCH3-216ENST00000481048 GAB3Q8WWW8 586 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 USP13Q92995 863 aaPredicted RBP6.89□□□□□ -1.31
LRCH3-216ENST00000481048 ATP2A3Q93084 1043 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 ZFYVE19Q96K21 471 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 ZC3H10Q96K80 434 aaKnown RBP6.89□□□□□ -1.31
LRCH3-216ENST00000481048 SPATA17Q96L03 361 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 SLC6A18Q96N87 628 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 JMJD8Q96S16 334 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 PKMYT1Q99640 499 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 PI4K2AQ9BTU6 479 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 CUEDC2Q9H467 287 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 HPS4Q9NQG7 708 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 PANK4Q9NVE7 773 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 RBAKQ9NYW8 714 aaPredicted RBP6.89□□□□□ -1.31
LRCH3-216ENST00000481048 CDH9Q9ULB4 789 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 L1RE1Q9UN81 338 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 SLC8A2Q9UPR5 921 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 PCDHGA5Q9Y5G8 931 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 CLIC4Q9Y696 253 aa6.89□□□□□ -1.31
LRCH3-216ENST00000481048 CHD8Q9HCK8 2581 aa6.88□□□□□ -1.31
LRCH3-216ENST00000481048 CABIN1Q9Y6J0 2220 aa6.88□□□□□ -1.31
LRCH3-216ENST00000481048 PLXND1Q9Y4D7 1925 aa6.88□□□□□ -1.31
LRCH3-216ENST00000481048 TRAV19A0A0A6YYK7 116 aa6.88□□□□□ -1.31
LRCH3-216ENST00000481048 A0A1W2PQ27 194 aa6.88□□□□□ -1.31
LRCH3-216ENST00000481048 A0A1W2PQ64 194 aa6.88□□□□□ -1.31
LRCH3-216ENST00000481048 A0A1W2PQC6 194 aa6.88□□□□□ -1.31
LRCH3-216ENST00000481048 A0A1W2PQD8 194 aa6.88□□□□□ -1.31
LRCH3-216ENST00000481048 VPS37CA5D8V6 355 aaPredicted RBP6.88□□□□□ -1.31
LRCH3-216ENST00000481048 EIF3DO15371 548 aaKnown RBP eCLIP6.88□□□□□ -1.31
LRCH3-216ENST00000481048 RPP40O75818 363 aaKnown RBP6.88□□□□□ -1.31
LRCH3-216ENST00000481048 TNNC2P02585 160 aa6.88□□□□□ -1.31
LRCH3-216ENST00000481048 ADRB1P08588 477 aa6.88□□□□□ -1.31
LRCH3-216ENST00000481048 KRT19P08727 400 aa6.88□□□□□ -1.31
LRCH3-216ENST00000481048 TMEM191BP0C7N4 346 aa6.88□□□□□ -1.31
LRCH3-216ENST00000481048 ZNF806P0C7X5 589 aa6.88□□□□□ -1.31
LRCH3-216ENST00000481048 NME1P15531 152 aaKnown RBP6.88□□□□□ -1.31
LRCH3-216ENST00000481048 SYT1P21579 422 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms