RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 PSMD4P55036 377 aaKnown RBP9.74□□□□□ -0.85
VEGFA-212ENST00000480614 MZT2BQ6NZ67 158 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 TMEM176AQ96HP8 235 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 REEP1Q9H902 201 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 DNAJC16Q9Y2G8 782 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 RASA1P20936 1047 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 DSG3P32926 999 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 LRRC34Q8IZ02 419 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 FBXO39Q8N4B4 442 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 PPP1R16AQ96I34 528 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 RPS6KA6Q9UK32 745 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 PPP2R3BQ9Y5P8 575 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 H2AFXP16104 143 aaPredicted RBP9.74□□□□□ -0.85
VEGFA-212ENST00000480614 DGKKQ5KSL6 1271 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 TYW3Q6IPR3 259 aaKnown RBP9.74□□□□□ -0.85
VEGFA-212ENST00000480614 LIN54Q6MZP7 749 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 GMCL1P1Q8NEA9 526 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 OR52L1Q8NGH7 329 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 EPS8L3Q8TE67 593 aaKnown RBP9.74□□□□□ -0.85
VEGFA-212ENST00000480614 CNGB3Q9NQW8 809 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 BARX2Q9UMQ3 279 aaPredicted RBP9.74□□□□□ -0.85
VEGFA-212ENST00000480614 DLG5Q8TDM6 1919 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 ENO2P09104 434 aaPredicted RBP9.74□□□□□ -0.85
VEGFA-212ENST00000480614 OR56A5P0C7T3 313 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 PBLDP30039 288 aaPredicted RBP9.74□□□□□ -0.85
VEGFA-212ENST00000480614 PKN1Q16512 942 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 ZC2HC1CQ53FD0 456 aaPredicted RBP9.74□□□□□ -0.85
VEGFA-212ENST00000480614 CENPIQ92674 756 aaPredicted RBP9.74□□□□□ -0.85
VEGFA-212ENST00000480614 GYS1P13807 737 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 ACO1P21399 889 aaKnown RBP9.74□□□□□ -0.85
VEGFA-212ENST00000480614 CSNK2BP67870 215 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 KCNMA1Q12791 1236 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 FASTKQ14296 549 aaKnown RBP9.74□□□□□ -0.85
VEGFA-212ENST00000480614 SPATA5L1Q9BVQ7 753 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 DPY30Q9C005 99 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 THAP2Q9H0W7 228 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 SLIT1O75093 1534 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 ATXN2Q99700 1313 aaKnown RBP9.74□□□□□ -0.85
VEGFA-212ENST00000480614 PHGDHO43175 533 aaKnown RBP9.74□□□□□ -0.85
VEGFA-212ENST00000480614 RGS14O43566 566 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 RAMP2O60895 175 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 BAIAP3O94812 1187 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 GP5P40197 560 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 LYPLAL1Q5VWZ2 237 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 MZT2AQ6P582 158 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 METTL3Q86U44 580 aaKnown RBP9.74□□□□□ -0.85
VEGFA-212ENST00000480614 MIB1Q86YT6 1006 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 CCDC33Q8N5R6 958 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 TRPC4APQ8TEL6 797 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 SERPINB11Q96P15 392 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 TBL1YQ9BQ87 522 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 C1orf50Q9BV19 199 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 TUBA8Q9NY65 449 aaPredicted RBP9.74□□□□□ -0.85
VEGFA-212ENST00000480614 DNAJC5BQ9UF47 199 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 ERI2A8K979 691 aaKnown RBP9.74□□□□□ -0.85
VEGFA-212ENST00000480614 SLC9A3R1O14745 358 aaPredicted RBP9.74□□□□□ -0.85
VEGFA-212ENST00000480614 TSPAN19P0C672 248 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 CYP2F1P24903 491 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 PSMB9P28065 219 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 SMAD5Q99717 465 aaKnown RBP9.74□□□□□ -0.85
VEGFA-212ENST00000480614 NRDE2Q9H7Z3 1164 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 RHBDL2Q9NX52 303 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 ZDHHC9Q9Y397 364 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 DIP2AQ14689 1571 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 F8VZ95 297 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 CYP2B6P20813 491 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 AXLP30530 894 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 SLC1A6P48664 564 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 AQP5P55064 265 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 PCBP1Q15365 356 aaKnown RBP eCLIP9.74□□□□□ -0.854e-7■■□□□ 11.7
VEGFA-212ENST00000480614 FAM182BQ5T319 152 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 EXOC3L1Q86VI1 746 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 CROCCP3Q8IVE0 287 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.74□□□□□ -0.85
VEGFA-212ENST00000480614 ZFP28Q8NHY6 868 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 ATXN2LQ8WWM7 1075 aaKnown RBP9.74□□□□□ -0.85
VEGFA-212ENST00000480614 VAT1Q99536 393 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 ING3Q9NXR8 418 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 GGA3Q9NZ52 723 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 GNRH1P01148 92 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 PTPN11Q06124 597 aaPredicted RBP9.74□□□□□ -0.85
VEGFA-212ENST00000480614 ACAP1Q15027 740 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 ERMARDQ5T6L9 678 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 ENGASEQ8NFI3 743 aa9.74□□□□□ -0.85
VEGFA-212ENST00000480614 CAPN1P07384 714 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 PAEPP09466 180 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 NECAB2Q7Z6G3 386 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 ASZ1Q8WWH4 475 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 DNAJC1Q96KC8 554 aaKnown RBP9.73□□□□□ -0.85
VEGFA-212ENST00000480614 ROGDIQ9GZN7 287 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 SLC12A8A0AV02 714 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 TRIM43BA6NCK2 446 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 TBX4P57082 545 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 PDPK2PQ6A1A2 396 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 KCNMB4Q86W47 210 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 APOPT1Q96IL0 206 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 DNPEPQ9ULA0 475 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 ZNF232Q9UNY5 417 aa9.73□□□□□ -0.85
VEGFA-212ENST00000480614 ARIH1Q9Y4X5 557 aaPredicted RBP9.73□□□□□ -0.85
VEGFA-212ENST00000480614 PPP1R3GB7ZBB8 358 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms