RNA–Protein interactions for RNA: ENST00000478914.1

XRCC6-208, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2

Gene XRCC6, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-208ENST00000478914 CYTH4Q9UIA0 394 aa9.05□□□□□ -0.96
XRCC6-208ENST00000478914 DNAJC12Q9UKB3 198 aa9.05□□□□□ -0.96
XRCC6-208ENST00000478914 PCDHGC3Q9UN70 934 aa9.05□□□□□ -0.96
XRCC6-208ENST00000478914 NCKAP1Q9Y2A7 1128 aa9.05□□□□□ -0.96
XRCC6-208ENST00000478914 NFE2L3Q9Y4A8 694 aa9.05□□□□□ -0.96
XRCC6-208ENST00000478914 CACNA1EQ15878 2313 aa9.05□□□□□ -0.96
XRCC6-208ENST00000478914 KMT2BQ9UMN6 2715 aaPredicted RBP9.04□□□□□ -0.96
XRCC6-208ENST00000478914 SYNJ2BP-COX16A0A087WUM0 186 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 METTL12A8MUP2 240 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 BCAT2O15382 392 aaPredicted RBP9.04□□□□□ -0.96
XRCC6-208ENST00000478914 HSF2BPO75031 334 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 LUC7L3O95232 432 aaKnown RBP9.04□□□□□ -0.96
XRCC6-208ENST00000478914 IGLV3-19P01714 112 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 TPM2P07951 284 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 ERCC5P28715 1186 aaPredicted RBP9.04□□□□□ -0.96
XRCC6-208ENST00000478914 CCR1P32246 355 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 NNMTP40261 264 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 CSKP41240 450 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 SHC2P98077 582 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 APBA1Q02410 837 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 FOXC1Q12948 553 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 MTA1Q13330 715 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 RAPGEF1Q13905 1077 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 HNRNPDQ14103 355 aaKnown RBP9.04□□□□□ -0.96
XRCC6-208ENST00000478914 ST3GAL2Q16842 350 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 PTPRNQ16849 979 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 VWA3BQ502W6 1294 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 HSP90AA4PQ58FG1 418 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 ZC3H12AQ5D1E8 599 aaKnown RBP9.04□□□□□ -0.96
XRCC6-208ENST00000478914 RABGAP1LQ5R372 815 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 TTC39BQ5VTQ0 682 aaPredicted RBP9.04□□□□□ -0.96
XRCC6-208ENST00000478914 LRSAM1Q6UWE0 723 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 C11orf57Q6ZUT1 292 aaPredicted RBP9.04□□□□□ -0.96
XRCC6-208ENST00000478914 IRF2BP1Q8IU81 584 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 CFAP52Q8N1V2 620 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 ZCCHC9Q8N567 271 aaKnown RBP9.04□□□□□ -0.96
XRCC6-208ENST00000478914 C1orf131Q8NDD1 294 aaKnown RBP9.04□□□□□ -0.96
XRCC6-208ENST00000478914 GANCQ8TET4 914 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 DNASE2BQ8WZ79 361 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 TTC17Q96AE7 1141 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 CPXM1Q96SM3 734 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 TUBGCP2Q9BSJ2 902 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 BTBD1Q9H0C5 482 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 NDST4Q9H3R1 872 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 PRSS16Q9NQE7 514 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 ASNSD1Q9NWL6 643 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 DDIT4Q9NX09 232 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 COX16Q9P0S2 106 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 KIAA1522Q9P206 1035 aaPredicted RBP9.04□□□□□ -0.96
XRCC6-208ENST00000478914 EIF2B4Q9UI10 523 aaKnown RBP9.04□□□□□ -0.96
XRCC6-208ENST00000478914 SCML1Q9UN30 329 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 PCDHB9Q9Y5E1 797 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 PLXNA2O75051 1894 aa9.04□□□□□ -0.96
XRCC6-208ENST00000478914 DOCK4Q8N1I0 1966 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 CHD8Q9HCK8 2581 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 KCNU1A8MYU2 1149 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 UPK3BL1B0FP48 263 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 UPK3BL2E5RIL1 263 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 GRAP2O75791 330 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 SEMA4FO95754 770 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 CER1O95813 267 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 SRPRAP08240 638 aaKnown RBP9.03□□□□□ -0.96
XRCC6-208ENST00000478914 OXCT1P55809 520 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 RPS14P62263 151 aaKnown RBP9.03□□□□□ -0.96
XRCC6-208ENST00000478914 GRIK2Q13002 908 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 SEMA3BQ13214 749 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 SLC14A1Q13336 389 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 SLC12A1Q13621 1099 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 KCNJ12Q14500 433 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 TEAD4Q15561 434 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 DPCR1Q3MIW9 517 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 PITRM1Q5JRX3 1037 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 IL27RAQ6UWB1 636 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 FAM183BPQ6ZVS7 135 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 SND1Q7KZF4 910 aaKnown RBP eCLIP9.03□□□□□ -0.965e-7■□□□□ 10.8
XRCC6-208ENST00000478914 ZDHHC17Q8IUH5 632 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 DHX40Q8IX18 779 aaKnown RBP9.03□□□□□ -0.96
XRCC6-208ENST00000478914 DEFB106AQ8N104 65 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 KDM1BQ8NB78 822 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 TMEM35BQ8NCS4 154 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 MSANTD4Q8NCY6 345 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 OR2I1PQ8NGU4 316 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 SLC2A13Q96QE2 648 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 PPP1R9BQ96SB3 815 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 SGK2Q9HBY8 427 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 SIX2Q9NPC8 291 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 DNAAF2Q9NVR5 837 aaKnown RBP9.03□□□□□ -0.96
XRCC6-208ENST00000478914 RRN3Q9NYV6 651 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 XPO7Q9UIA9 1087 aaKnown RBP9.03□□□□□ -0.96
XRCC6-208ENST00000478914 ERVW-1Q9UQF0 538 aa9.03□□□□□ -0.96
XRCC6-208ENST00000478914 EDDM13A0A1B0GTR0 161 aa9.02□□□□□ -0.97
XRCC6-208ENST00000478914 A0A1B0GVM2 712 aa9.02□□□□□ -0.97
XRCC6-208ENST00000478914 TARSL2A2RTX5 802 aaKnown RBP9.02□□□□□ -0.97
XRCC6-208ENST00000478914 TCAF2A6NFQ2 919 aa9.02□□□□□ -0.97
XRCC6-208ENST00000478914 FOXN3O00409 490 aaPredicted RBP9.02□□□□□ -0.97
XRCC6-208ENST00000478914 SIN3BO75182 1162 aa9.02□□□□□ -0.97
XRCC6-208ENST00000478914 DAB1O75553 588 aa9.02□□□□□ -0.97
XRCC6-208ENST00000478914 FSBPO95073 299 aa9.02□□□□□ -0.97
XRCC6-208ENST00000478914 IGLV3-25P01717 112 aa9.02□□□□□ -0.97
XRCC6-208ENST00000478914 ERBB2P04626 1255 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms