RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 NCOA5Q9HCD5 579 aaKnown RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 ABCB9Q9NP78 766 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 MED11Q9P086 117 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 IFT80Q9P2H3 777 aaPredicted RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 RUVBL1Q9Y265 456 aaKnown RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 SENP3-EIF4A1A0A087X0R7 540 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 HAT1O14929 419 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 MAGEB2O15479 319 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 ALPPL2P10696 532 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 PRELPP51888 382 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 HK2P52789 917 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 GTF2IP78347 998 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 ARF5P84085 180 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 UAP1L1Q3KQV9 507 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 PRR23CQ6ZRP0 262 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 OR10H5Q8NGA6 315 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 CCDC115Q96NT0 180 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 TRMT13Q9NUP7 481 aaKnown RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 C14orf105Q9NVL8 296 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 MTRRQ9UBK8 725 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 CRLS1Q9UJA2 301 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.53□□□□□ -1.52
USF3-202ENST00000478658 H3BQF6 201 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 RIPK2O43353 540 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 ANGPTL7O43827 346 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 BNIP3LO60238 219 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 MAPK8P45983 427 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 MXI1P50539 228 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 ARPP19P56211 112 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 C21orf59P57076 290 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 PPP3R1P63098 170 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 OCLNQ16625 522 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 ZNF792Q3KQV3 632 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 INTS6LQ5JSJ4 861 aaKnown RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 KCNT1Q5JUK3 1230 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 TDRD10Q5VZ19 366 aaKnown RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 ARL6IP4Q66PJ3 421 aaKnown RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 FAM171BQ6P995 826 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 R3HCC1LQ7Z5L2 792 aaKnown RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 SDR16C5Q8N3Y7 309 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 C12orf50Q8NA57 414 aaPredicted RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 POC5Q8NA72 575 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 XAGE3Q8WTP9 111 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 MASTLQ96GX5 879 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 SERAC1Q96JX3 654 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 TRNT1Q96Q11 434 aaKnown RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 MSTO1Q9BUK6 570 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 TLR7Q9NYK1 1049 aaKnown RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 PRKAG3Q9UGI9 489 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 AFF4Q9UHB7 1163 aaKnown RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 NR2E3Q9Y5X4 410 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 AIPO00170 330 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 RGL2O15211 777 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 PDE8BO95263 885 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 HEXAP06865 529 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 CCNG1P51959 295 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 AP2S1P53680 142 aaPredicted RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 CACNB3P54284 484 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 PDIA2Q13087 525 aaKnown RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 CPXCR1Q8N123 301 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 TXNDC5Q8NBS9 432 aaKnown RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 TMEM161BQ8NDZ6 487 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 OR2L5Q8NG80 312 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 NXNL1Q96CM4 212 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 MIPEPQ99797 713 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 AGPAT1Q99943 283 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 METTL8Q9H825 291 aaKnown RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 TRPV4Q9HBA0 871 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 YTHDC2Q9H6S0 1430 aaKnown RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 CHD4Q14839 1912 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 TUBAL3A6NHL2 446 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 TTC34A8MYJ7 566 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 EEF2KO00418 725 aaKnown RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 TADA2AO75478 443 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 ITGA10O75578 1167 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 DHFRP00374 187 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 GH1P01241 217 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 ITGA3P26006 1051 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 ERP29P30040 261 aaKnown RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 EIF3EP60228 445 aaKnown RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 PIGHQ14442 188 aaPredicted RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 MAPK14Q16539 360 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 LDLRAP1Q5SW96 308 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 SLC30A8Q8IWU4 369 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 TRPC4APQ8TEL6 797 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 MKL1Q969V6 931 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 NECAB3Q96P71 396 aaPredicted RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 BLZF1Q9H2G9 400 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 XKR8Q9H6D3 395 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 CLN6Q9NWW5 311 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 EIF3KQ9UBQ5 218 aaKnown RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 EXOC6BQ9Y2D4 811 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 CACNA1FO60840 1977 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 ADAMTS3O15072 1205 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 TRIM3O75382 744 aaPredicted RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 ALOX5P09917 674 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 KCNA5P22460 613 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 PRPH2P23942 346 aa5.53□□□□□ -1.52
USF3-202ENST00000478658 VARSP26640 1264 aaKnown RBP5.53□□□□□ -1.52
USF3-202ENST00000478658 EIF4A3P38919 411 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms