RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	HOXA11	P31270	313 aa	Predicted RBP	4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CTNNB1	P35222	781 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	GTF2F1	P35269	517 aa	Known RBP eCLIP	4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	PSMC2	P35998	433 aa	Known RBP	4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	OR1G1	P47890	313 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CYP2J2	P51589	502 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	AP3M2	P53677	418 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	FAM189B	P81408	668 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	DEFB103A	P81534	67 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	FKBP3	Q00688	224 aa	Known RBP	4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	MCL1	Q07820	350 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ELAVL2	Q12926	359 aa	Known RBP	4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	GRIK3	Q13003	919 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	TRPC3	Q13507	836 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	MYBPC2	Q14324	1141 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	STX1A	Q16623	288 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	PTPRO	Q16827	1216 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	KLHL40	Q2TBA0	621 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	EDRF1	Q3B7T1	1238 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	LSM12	Q3MHD2	195 aa	Known RBP	4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	LRIT3	Q3SXY7	679 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CCDC40	Q4G0X9	1142 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	TRIM61	Q5EBN2	209 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	C9orf50	Q5SZB4	431 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	FNDC7	Q5VTL7	733 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ISM2	Q6H9L7	571 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	GRAMD4	Q6IC98	578 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	KLHL10	Q6JEL2	608 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	KIAA1841	Q6NSI8	718 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CAVIN1	Q6NZI2	390 aa	Known RBP	4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ABHD17C	Q6PCB6	329 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	OVCH1	Q7RTY7	1134 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	MRPL10	Q7Z7H8	261 aa	Known RBP	4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CDR2L	Q86X02	465 aa	Predicted RBP	4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	TIFA	Q96CG3	184 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ANKRD36BP1	Q96IX9	119 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	UROC1	Q96N76	676 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ZNF558	Q96NG5	402 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	FAM213A	Q9BRX8	229 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	EIF2A	Q9BY44	585 aa	Known RBP	4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	IMPG2	Q9BZV3	1241 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CDT1	Q9H211	546 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	TMX1	Q9H3N1	280 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	PCIF1	Q9H4Z3	704 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ASB7	Q9H672	318 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	METTL14	Q9HCE5	456 aa	Known RBP	4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	TLR9	Q9NR96	1032 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	SNTG2	Q9NY99	539 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	RBAK	Q9NYW8	714 aa	Predicted RBP	4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	UBQLN1	Q9UMX0	589 aa	Known RBP	4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	SSX2IP	Q9Y2D8	614 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ASB1	Q9Y576	335 aa		4.84	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	MYH11	P35749	1972 aa		4.84	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	TANC1	Q9C0D5	1861 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289		A0A0B4J269	797 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	FSD2	A1L4K1	749 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	ARL5C	A6NH57	179 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	GOLGA6L19	H0YKK7	550 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	PES1	O00541	588 aa	Known RBP	4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	KLRC4	O43908	158 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	MGEA5	O60502	916 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	N4BP1	O75113	896 aa	Known RBP	4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	ZC3H11A	O75152	810 aa	Known RBP eCLIP	4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	TADA2A	O75478	443 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	RECQL4	O94761	1208 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	POMC	P01189	267 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	NR3C1	P04150	777 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	RB1	P06400	928 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	SRGAP2B	P0DMP2	458 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	CDK11B	P21127	795 aa	Known RBP	4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	NR2F2	P24468	414 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	AKAP5	P24588	427 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	CCNE1	P24864	410 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	SDHA	P31040	664 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	MLH1	P40692	756 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	PNPLA4	P41247	253 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	PRCP	P42785	496 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	MEOX1	P50221	254 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	MYO1E	Q12965	1108 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	STK4	Q13043	487 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	BIRC3	Q13489	604 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	GRM7	Q14831	915 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	TMEM132D	Q14C87	1099 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	BMT2	Q1RMZ1	405 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	COBLL1	Q53SF7	1204 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	CATSPERE	Q5SY80	951 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	PDXDC1	Q6P996	788 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	INTS8	Q75QN2	995 aa	Known RBP	4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	CSGALNACT2	Q8N6G5	542 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	SCFD1	Q8WVM8	642 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	NELFB	Q8WX92	580 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	P2RX5	Q93086	422 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	ZBTB45	Q96K62	511 aa	Predicted RBP	4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	ZNF560	Q96MR9	790 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	GAD1	Q99259	594 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	TMEM175	Q9BSA9	504 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	NELFA	Q9H3P2	528 aa		4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	NXF3	Q9H4D5	531 aa	Known RBP	4.83	□□□□□ -1.64
NSMCE4A-208	ENST00000477289	AGPAT3	Q9NRZ7	376 aa		4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms