RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 THRAP10827 490 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 PIM1P11309 404 aaPredicted RBP8.61□□□□□ -1.03
VAPB-205ENST00000476395 PSMA2P25787 234 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 RCVRNP35243 200 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 SLC10A2Q12908 348 aaPredicted RBP8.61□□□□□ -1.03
VAPB-205ENST00000476395 ATP1A4Q13733 1029 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 BMPR2Q13873 1038 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 CA9Q16790 459 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 RALGAPA2Q2PPJ7 1873 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 SLFN12LQ6IEE8 588 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 TRMT10BQ6PF06 316 aaKnown RBP8.61□□□□□ -1.03
VAPB-205ENST00000476395 ZPBP2Q6X784 338 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 Q6ZNX1 250 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 PTAR1Q7Z6K3 402 aaPredicted RBP8.61□□□□□ -1.03
VAPB-205ENST00000476395 THNSL1Q8IYQ7 743 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 BBS5Q8N3I7 341 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 C1orf127Q8N9H9 656 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 TMEM35BQ8NCS4 154 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 DEPTORQ8TB45 409 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 DNAI2Q9GZS0 605 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 ANLNQ9NQW6 1124 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 EBF1Q9UH73 591 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 PCSK1NQ9UHG2 260 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 POMPQ9Y244 141 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 FNDC1Q4ZHG4 1894 aaPredicted RBP8.61□□□□□ -1.03
VAPB-205ENST00000476395 CEP350Q5VT06 3117 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 TANC1Q9C0D5 1861 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 KANSL1LA0AUZ9 987 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 A8MU76 341 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 HOXA2O43364 376 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 LDHAP00338 332 aaKnown RBP8.61□□□□□ -1.03
VAPB-205ENST00000476395 KRT3P12035 628 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 TSHRP16473 764 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 GRIA1P42261 906 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 ALDH1A3P47895 512 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 OAZ1P54368 228 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 HMGCS2P54868 508 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 TMPRSS15P98073 1019 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 ITGA7Q13683 1181 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 ITGA9Q13797 1035 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 CHI3L2Q15782 390 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 C15orf59Q2T9L4 293 aaPredicted RBP8.61□□□□□ -1.03
VAPB-205ENST00000476395 BBS9Q3SYG4 887 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 C10orf62Q5T681 223 aaPredicted RBP8.61□□□□□ -1.03
VAPB-205ENST00000476395 PRAMEF18Q5VWM3 479 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 CATSPERGQ6ZRH7 1159 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 USP33Q8TEY7 942 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 HEPHQ9BQS7 1158 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 APOL6Q9BWW8 343 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 EPB41L1Q9H4G0 881 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 SLC17A6Q9P2U8 582 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 DMTF1Q9Y222 760 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 PLLPQ9Y342 182 aa8.61□□□□□ -1.03
VAPB-205ENST00000476395 LINC00854A0A1B0GVQ3 168 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 SOWAHBA6NEL2 793 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 SLC15A5A6NIM6 579 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 ZNF195O14628 629 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 L1CAMP32004 1257 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 SLC5A3P53794 718 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 CNGA3Q16281 694 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 PCGF5Q86SE9 256 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 UNC5BQ8IZJ1 945 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 DEFB107AQ8IZN7 70 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 C7orf31Q8N865 590 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 NLGN2Q8NFZ4 835 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 TRNAU1APQ9NX07 287 aaKnown RBP8.6□□□□□ -1.03
VAPB-205ENST00000476395 MTMR10Q9NXD2 777 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 SFMBT1Q9UHJ3 866 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 USP18Q9UMW8 372 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 NR2E3Q9Y5X4 410 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 C2CD4BA6NLJ0 364 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 CILPO75339 1184 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 TOM1L1O75674 476 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 OXSR1O95747 527 aaPredicted RBP8.6□□□□□ -1.03
VAPB-205ENST00000476395 ALDH2P05091 517 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 NFICP08651 508 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 MAPK10P53779 464 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 EIF3EP60228 445 aaKnown RBP8.6□□□□□ -1.03
VAPB-205ENST00000476395 MRPS22P82650 360 aaKnown RBP8.6□□□□□ -1.03
VAPB-205ENST00000476395 TAP1Q03518 808 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 KLHL38Q2WGJ6 581 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 MAP7D1Q3KQU3 841 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 DCUN1D2Q6PH85 259 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 SAMD7Q7Z3H4 446 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 NIM1KQ8IY84 436 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 PEX5LQ8IYB4 626 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 SIGLEC10Q96LC7 697 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 SH3GL1Q99961 368 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 C11orf84Q9BUA3 381 aaPredicted RBP8.6□□□□□ -1.03
VAPB-205ENST00000476395 MUC3BQ9H195 1237 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 VPS33BQ9H267 617 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 GPAMQ9HCL2 828 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 CDH22Q9UJ99 828 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 GJD2Q9UKL4 321 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 MYLKQ15746 1914 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 H0YCG3 227 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 J3QRK9 145 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 B4GALT4O60513 344 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 MICAL2O94851 1124 aa8.6□□□□□ -1.03
VAPB-205ENST00000476395 METTL18O95568 372 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms