RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	CTNNA1	P35221	906 aa	Known RBP	12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	PCK1	P35558	622 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	CETN2	P41208	172 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	PAFAH1B1	P43034	410 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	PTPN9	P43378	593 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	TNFRSF4	P43489	277 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	RGS7	P49802	495 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	TKTL1	P51854	596 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	TERF1	P54274	439 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	SEC13	P55735	322 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	HSF5	Q4G112	596 aa	Predicted RBP	12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	C2orf27A	Q580R0	203 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	C10orf120	Q5SQS8	335 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	BTBD8	Q5XKL5	378 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663		Q6ZNB5	142 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	FAM183BP	Q6ZVS7	135 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	POLN	Q7Z5Q5	900 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	TMEM25	Q86YD3	366 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	SFTPA1	Q8IWL2	248 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	RHOT1	Q8IXI2	618 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	ARHGAP18	Q8N392	663 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	FAM160A2	Q8N612	972 aa	Predicted RBP	12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	MCEE	Q96PE7	176 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	OSBPL9	Q96SU4	736 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	ARHGEF4	Q9NR80	690 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	METTL5	Q9NRN9	209 aa	Known RBP	12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	DLL3	Q9NYJ7	618 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	MARK1	Q9P0L2	795 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	LSM7	Q9UK45	103 aa	Known RBP	12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	NUDT5	Q9UKK9	219 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	TTC7A	Q9ULT0	858 aa	Predicted RBP	12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	STAP1	Q9ULZ2	295 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	MMP17	Q9ULZ9	603 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	PCDHA3	Q9Y5H8	950 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	WDR87	Q6ZQQ6	2873 aa		12.5	□□□□□ -0.41
CTNS-205	ENST00000467663	C2CD4B	A6NLJ0	364 aa		12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	GOLGA8S	H3BPF8	625 aa		12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	ENC1	O14682	589 aa		12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	MDM4	O15151	490 aa		12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	TULP3	O75386	442 aa		12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	STC2	O76061	302 aa		12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	FTCD	O95954	541 aa		12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	ZBED1	O96006	694 aa		12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	KRT7	P08729	469 aa		12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	PSMA2	P25787	234 aa		12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	SDC4	P31431	198 aa		12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	NOS2	P35228	1153 aa		12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	RFC1	P35251	1148 aa	Predicted RBP	12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	KIR2DL1	P43626	348 aa	Predicted RBP	12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	RWDD2B	P57060	319 aa		12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	RPL7A	P62424	266 aa	Known RBP	12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	YWHAZ	P63104	245 aa	Known RBP	12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	LMNB2	Q03252	620 aa		12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	SPEM2	Q0P670	501 aa		12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	ADIG	Q0VDE8	80 aa		12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	CRY1	Q16526	586 aa		12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	PREPL	Q4J6C6	727 aa	Predicted RBP	12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	ERMP1	Q7Z2K6	904 aa		12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	RASSF3	Q86WH2	238 aa		12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	SCUBE3	Q8IX30	993 aa		12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	NAT16	Q8N8M0	369 aa		12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	IL17RC	Q8NAC3	791 aa		12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	TSTD1	Q8NFU3	115 aa		12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	LOXL4	Q96JB6	756 aa		12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	ZC3H10	Q96K80	434 aa	Known RBP	12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	POPDC2	Q9HBU9	364 aa		12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	DDX56	Q9NY93	547 aa	Known RBP	12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	DEC1	Q9P2X7	70 aa		12.49	□□□□□ -0.41
CTNS-205	ENST00000467663	PRR5-ARHGAP8	B1AHC4	643 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	TULP2	O00295	520 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	DAB1	O75553	588 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	F9	P00740	461 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	LCP1	P13796	627 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	PDGFRA	P16234	1089 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	MATK	P42679	507 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	DGKE	P52429	567 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	AIF1	P55008	147 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	DAOA	P59103	153 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	COPS2	P61201	443 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	YWHAG	P61981	247 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	COG7	P83436	770 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	ARHGAP8	P85298	464 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	FOXK2	Q01167	660 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	KDSR	Q06136	332 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	PUM1	Q14671	1186 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	CSRP2	Q16527	193 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	PPP2R5E	Q16537	467 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	ANO4	Q32M45	955 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	C2CD6	Q53TS8	623 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	EMC10	Q5UCC4	262 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	STRADA	Q7RTN6	431 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	BHLHA9	Q7RTU4	235 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	KBTBD6	Q86V97	674 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	VSIG1	Q86XK7	387 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	CCDC33	Q8N5R6	958 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	ALLC	Q8N6M5	410 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	ACTRT1	Q8TDG2	376 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	KCNV2	Q8TDN2	545 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	MAIP1	Q8WWC4	291 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	TBCB	Q99426	244 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms